Conservation of cofitness between CSW01_07495 and CSW01_00015 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07495 NAD-glutamate dehydrogenase 1.0 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.65 13
Shewanella loihica PV-4 0.58 Shew_1809 NAD-glutamate dehydrogenase (RefSeq) 0.73 Shew_3865 trmE tRNA modification GTPase TrmE (RefSeq) — —
Shewanella sp. ANA-3 0.57 Shewana3_1785 glutamate dehydrogenase (NAD) (RefSeq) 0.75 Shewana3_0005 trmE tRNA modification GTPase TrmE (RefSeq) low > 73
Shewanella oneidensis MR-1 0.57 SO2593 conserved hypothetical protein (NCBI ptt file) 0.75 SO0003 trmE tRNA modification GTPase TrmE (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.57 Sama_1592 hypothetical protein (RefSeq) 0.75 Sama_0008 trmE tRNA modification GTPase TrmE (RefSeq) — —
Alteromonas macleodii MIT1002 0.56 MIT1002_02034 NAD-specific glutamate dehydrogenase 0.67 MIT1002_04128 tRNA modification GTPase MnmE — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_0998 NAD-specific glutamate dehydrogenase 0.63 B158DRAFT_0373 tRNA modification GTPase TrmE 0.70 30
Pseudomonas aeruginosa PA14 0.44 IKLFDK_15595 NAD-specific glutamate dehydrogenase 0.66 IKLFDK_25575 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 101
Marinobacter adhaerens HP15 0.44 HP15_2269 NAD-specific glutamate dehydrogenase 0.68 HP15_3698 tRNA modification GTPase TrmE — —
Pseudomonas sp. S08-1 0.44 OH686_22265 NAD-specific glutamate dehydrogenase , large form 0.63 OH686_12655 tRNA modification GTPase TrmE — —
Pseudomonas sp. DMC3 0.44 GFF3012 NAD-specific glutamate dehydrogenase 0.64 GFF573 tRNA modification GTPase MnmE — —
Pseudomonas sp. RS175 0.43 PFR28_01602 NAD-specific glutamate dehydrogenase 0.64 PFR28_04588 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_3298 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form 0.64 PfGW456L13_670 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_22820 NAD-glutamate dehydrogenase 0.64 AO353_10455 tRNA modification GTPase MnmE low > 101
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_634 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form 0.64 Pf6N2E2_4202 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas stutzeri RCH2 0.43 Psest_1944 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data) 0.64 Psest_4373 tRNA modification GTPase TrmE — —
Pseudomonas simiae WCS417 0.43 PS417_15075 NAD-glutamate dehydrogenase 0.64 PS417_28540 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_4643 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form 0.64 Pf1N1B4_1933 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_24705 NAD-glutamate dehydrogenase 0.64 AO356_11660 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS17095 NAD-glutamate dehydrogenase 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas fluorescens SBW25 0.43 PFLU_RS17095 NAD-glutamate dehydrogenase 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 109
Pseudomonas putida KT2440 0.43 PP_2080 NAD-specific glutamate dehydrogenase 0.65 PP_0005 GTPase — —
Pseudomonas sp. BP01 0.43 JOY50_RS22180 NAD-glutamate dehydrogenase 0.65 JOY50_RS08375 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1724 glutamate dehydrogenase (NAD) 0.64 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1724 glutamate dehydrogenase (NAD) 0.64 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas sp. SVBP6 0.42 COO64_RS05395 NAD-glutamate dehydrogenase 0.63 COO64_RS02085 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS22605 NAD-glutamate dehydrogenase 0.49 ABZR87_RS05350 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 80
Ralstonia solanacearum UW163 0.42 UW163_RS18785 NAD-glutamate dehydrogenase 0.49 UW163_RS04170 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS20390 NAD-glutamate dehydrogenase 0.49 RALBFv3_RS09410 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS18780 NAD-glutamate dehydrogenase 0.49 RPSI07_RS23950 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Azospirillum brasilense Sp245 0.41 AZOBR_RS00190 L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) (from data) 0.27 AZOBR_RS01805 tRNA modification GTPase TrmE low > 97
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS07270 NAD-glutamate dehydrogenase 0.49 RR42_RS20805 tRNA modification GTPase TrmE — —
Lysobacter sp. OAE881 0.41 ABIE51_RS09105 NAD-glutamate dehydrogenase domain-containing protein 0.39 ABIE51_RS00735 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 62
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_03183 glutamate dehydrogenase (NAD) 0.49 H281DRAFT_02320 tRNA modification GTPase trmE — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS22475 NAD-glutamate dehydrogenase 0.50 BPHYT_RS19830 tRNA modification GTPase TrmE — —
Paraburkholderia graminis OAS925 0.41 ABIE53_004113 glutamate dehydrogenase 0.50 ABIE53_000332 tRNA modification GTPase — —
Azospirillum sp. SherDot2 0.40 MPMX19_04621 NAD-specific glutamate dehydrogenase 0.26 MPMX19_02568 tRNA modification GTPase MnmE — —
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.2182.1 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form 0.41 Xcc-8004.5407.1 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 74
Magnetospirillum magneticum AMB-1 0.40 AMB_RS00165 NAD-glutamate dehydrogenase 0.27 AMB_RS00005 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS20065 NAD-glutamate dehydrogenase 0.49 QEN71_RS29655 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS07560 NAD-glutamate dehydrogenase domain-containing protein 0.46 ABZR86_RS15115 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Rhodospirillum rubrum S1H 0.39 Rru_A3663 NAD-glutamate dehydrogenase (NCBI) 0.26 Rru_A3624 tRNA modification GTPase TrmE (NCBI) — —
Rhodanobacter sp000427505 FW510-R12 0.38 LRK53_RS07945 NAD-glutamate dehydrogenase 0.42 LRK53_RS02290 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 60
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_09160 gdh2 NAD-specific glutamate dehydrogenase 0.46 OKGIIK_15285 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 52
Rhodanobacter denitrificans MT42 0.38 LRK55_RS01865 NAD-glutamate dehydrogenase 0.46 LRK55_RS08270 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 63
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS02090 NAD-glutamate dehydrogenase 0.46 LRK54_RS08505 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 59
Bosea sp. OAE506 0.33 ABIE41_RS04780 NAD-glutamate dehydrogenase 0.27 ABIE41_RS04680 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 77
Xanthobacter sp. DMC5 0.33 GFF3560 NAD-specific glutamate dehydrogenase 0.28 GFF3741 tRNA modification GTPase MnmE — —
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS13510 NAD-glutamate dehydrogenase 0.27 A4249_RS13700 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_00086 NAD-specific glutamate dehydrogenase GdhZ 0.28 CCNA_03872 tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase — —
Caulobacter crescentus NA1000 0.33 CCNA_00086 NAD-specific glutamate dehydrogenase GdhZ 0.28 CCNA_03872 tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase — —
Sinorhizobium meliloti 1021 0.32 SMc04085 hypothetical protein 0.28 SMc02797 tRNA modification GTPase TrmE — —
Rhizobium sp. OAE497 0.31 ABIE40_RS19120 NAD-glutamate dehydrogenase 0.28 ABIE40_RS19220 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 107
Agrobacterium fabrum C58 0.30 Atu2766 NAD-glutamate dehydrogenase 0.28 Atu2832 tRNA modification GTPase low > 89
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1252 NAD-specific glutamate dehydrogenase 0.23 Ga0059261_2204 tRNA modification GTPase trmE — —

Not shown: 1 genomes with orthologs for CSW01_07495 only; 55 genomes with orthologs for CSW01_00015 only