Conservation of cofitness between BPHYT_RS16975 and BPHYT_RS33880 in Burkholderia phytofirmans PsJN

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16975 shikimate 5-dehydrogenase 1.0 BPHYT_RS33880 N-(5'-phosphoribosyl)anthranilate isomerase 0.74 13
Paraburkholderia graminis OAS925 0.93 ABIE53_003560 shikimate dehydrogenase 0.81 ABIE53_004808 phosphoribosylanthranilate isomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.90 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.80 H281DRAFT_06068 phosphoribosylanthranilate isomerase — —
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS27130 shikimate dehydrogenase 0.76 QEN71_RS17640 phosphoribosylanthranilate isomerase 0.83 6
Ralstonia solanacearum PSI07 0.55 RPSI07_RS11300 shikimate dehydrogenase 0.55 RPSI07_RS14725 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS05945 shikimate dehydrogenase 0.56 RALBFv3_RS02590 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum UW163 0.54 UW163_RS07680 shikimate dehydrogenase 0.56 UW163_RS11135 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum GMI1000 0.54 RS_RS13890 shikimate dehydrogenase 0.55 RS_RS09970 phosphoribosylanthranilate isomerase — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS01605 shikimate dehydrogenase 0.55 ABZR87_RS14505 phosphoribosylanthranilate isomerase 0.54 44
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS01990 shikimate 5-dehydrogenase 0.53 HSERO_RS16480 N-(5'-phosphoribosyl)anthranilate isomerase 0.76 12
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS17645 shikimate dehydrogenase 0.50 RR42_RS14365 N-(5'-phosphoribosyl)anthranilate isomerase 0.74 25
Pseudomonas sp. S08-1 0.47 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.38 OH686_04445 Phosphoribosylanthranilate isomerase low > 80
Pseudomonas putida KT2440 0.47 PP_0074 shikimate 5-dehydrogenase 0.37 PP_1995 N-(5'-phosphoribosyl)anthranilate isomerase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0025 shikimate dehydrogenase 0.36 Psyr_1663 phosphoribosylanthranilate isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0025 shikimate dehydrogenase 0.36 Psyr_1663 phosphoribosylanthranilate isomerase 0.58 33
Pseudomonas sp. RS175 0.46 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.41 PFR28_02816 'N-(5'-phosphoribosyl)anthranilate isomerase' transl_table=11 — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_11315 shikimate dehydrogenase 0.38 AO356_21440 N-(5'-phosphoribosyl)anthranilate isomerase 0.51 32
Pseudomonas simiae WCS417 0.45 PS417_00125 shikimate dehydrogenase 0.41 PS417_18560 N-(5'-phosphoribosyl)anthranilate isomerase — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.37 Pf6N2E2_71 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS00120 shikimate dehydrogenase 0.41 PFLU_RS20540 phosphoribosylanthranilate isomerase — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS00120 shikimate dehydrogenase 0.41 PFLU_RS20540 phosphoribosylanthranilate isomerase — —
Marinobacter adhaerens HP15 0.45 HP15_3750 shikimate dehydrogenase 0.36 HP15_1828 phosphoribosylanthranilate isomerase — —
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.40 PfGW456L13_3940 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.73 48
Castellaniella sp019104865 MT123 0.44 ABCV34_RS11630 shikimate dehydrogenase 0.32 ABCV34_RS04250 phosphoribosylanthranilate isomerase — —
Pseudomonas stutzeri RCH2 0.44 Psest_0029 shikimate 5-dehydrogenase 0.39 Psest_2584 Phosphoribosylanthranilate isomerase — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_10670 shikimate dehydrogenase 0.42 AO353_20665 N-(5'-phosphoribosyl)anthranilate isomerase 0.75 15
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.36 Ac3H11_1533 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.97 2
Variovorax sp. SCN45 0.35 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.38 GFF3884 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) — —
Acinetobacter radioresistens SK82 0.35 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.36 MPMX26_02618 N-(5'-phosphoribosyl)anthranilate isomerase low > 36
Variovorax sp. OAS795 0.34 ABID97_RS06300 shikimate dehydrogenase 0.40 ABID97_RS08435 phosphoribosylanthranilate isomerase — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.34 Xcc-8004.1962.1 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.87 14
Lysobacter sp. OAE881 0.29 ABIE51_RS01815 shikimate dehydrogenase 0.28 ABIE51_RS08250 phosphoribosylanthranilate isomerase 0.76 8
Methanococcus maripaludis JJ 0.21 MMJJ_RS00280 shikimate dehydrogenase 0.13 MMJJ_RS09185 phosphoribosylanthranilate isomerase — —
Methanococcus maripaludis S2 0.21 MMP_RS04855 shikimate dehydrogenase 0.12 MMP_RS05195 phosphoribosylanthranilate isomerase — —
Rhodopseudomonas palustris CGA009 0.21 TX73_022410 shikimate dehydrogenase 0.23 TX73_000355 phosphoribosylanthranilate isomerase — —
Sinorhizobium meliloti 1021 0.20 SMc02791 shikimate 5-dehydrogenase 0.24 SMc02767 N-(5'-phosphoribosyl)anthranilate isomerase — —
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_1962 shikimate 5-dehydrogenase (RefSeq) 0.15 DvMF_1742 Phosphoribosylanthranilate isomerase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.19 PGA1_c35150 shikimate dehydrogenase AroE 0.23 PGA1_c04860 N-(5'-phosphoribosyl)anthranilate isomerase TrpF — —
Rhodospirillum rubrum S1H 0.19 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) 0.28 Rru_A3425 Phosphoribosylanthranilate isomerase (NCBI) — —
Azospirillum sp. SherDot2 0.19 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) 0.25 MPMX19_02207 N-(5'-phosphoribosyl)anthranilate isomerase — —
Rhizobium sp. OAE497 0.19 ABIE40_RS19250 shikimate dehydrogenase 0.21 ABIE40_RS19330 phosphoribosylanthranilate isomerase — —
Bosea sp. OAE506 0.18 ABIE41_RS04650 shikimate dehydrogenase 0.21 ABIE41_RS04265 phosphoribosylanthranilate isomerase — —
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_00003 shikimate 5-dehydrogenase 0.20 CCNA_03659 N-(5'-phosphoribosyl)anthranilate isomerase low > 67
Caulobacter crescentus NA1000 0.17 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.20 CCNA_03659 N-(5'-phosphoribosyl)anthranilate isomerase 0.95 2
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS14200 shikimate dehydrogenase 0.22 HMPREF1078_RS00125 phosphoribosylanthranilate isomerase 0.89 49
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS06320 shikimate dehydrogenase 0.21 HMPREF1181_RS15345 phosphoribosylanthranilate isomerase 0.77 50
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS20055 shikimate dehydrogenase 0.19 ABZR88_RS10670 phosphoribosylanthranilate isomerase — —
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS16750 shikimate dehydrogenase 0.22 HMPREF1058_RS07195 phosphoribosylanthranilate isomerase low > 67
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS12665 shikimate dehydrogenase 0.22 ABI39_RS21070 phosphoribosylanthranilate isomerase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1145 Shikimate 5-dehydrogenase 0.19 Echvi_2509 Phosphoribosylanthranilate isomerase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.14 CA264_19075 shikimate dehydrogenase 0.22 CA264_05075 hypothetical protein — —
Magnetospirillum magneticum AMB-1 0.14 AMB_RS23010 shikimate dehydrogenase 0.26 AMB_RS20250 N-(5'-phosphoribosyl)anthranilate isomerase — —
Pedobacter sp. GW460-11-11-14-LB5 0.13 CA265_RS19745 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.22 CA265_RS05015 N-(5'-phosphoribosyl)anthranilate isomerase — —
Bacteroides ovatus ATCC 8483 0.13 BACOVA_05065 putative shikimate dehydrogenase 0.21 BACOVA_03784 N-(5'phosphoribosyl)anthranilate isomerase — —
Bacteroides thetaiotaomicron VPI-5482 0.13 BT4215 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.22 BT0528 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) — —

Not shown: 36 genomes with orthologs for BPHYT_RS16975 only; 10 genomes with orthologs for BPHYT_RS33880 only