Conservation of cofitness between BPHYT_RS14135 and BPHYT_RS15305 in Burkholderia phytofirmans PsJN

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14135 phosphate transporter permease subunit PtsA 1.0 BPHYT_RS15305 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.67 10
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_04413 phosphate ABC transporter membrane protein 2, PhoT family 0.98 H281DRAFT_04004 (p)ppGpp synthetase I, SpoT/RelA low > 103
Paraburkholderia graminis OAS925 0.96 ABIE53_002993 phosphate transport system permease protein 0.96 ABIE53_003230 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 113
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS04830 phosphate ABC transporter permease PstA 0.94 QEN71_RS03665 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Ralstonia solanacearum GMI1000 0.74 RS_RS07680 phosphate ABC transporter, permease protein PstA 0.67 RS_RS10800 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF1736 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) 0.41 GFF357 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 low > 78
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4002 phosphate ABC transporter, permease protein PstA 0.41 EX28DRAFT_3899 (p)ppGpp synthetase, RelA/SpoT family
Escherichia fergusonii Becca 0.73 EFB2_04907 Phosphate transport system permease protein PstA 0.41 EFB2_00138 Bifunctional (p)ppGpp synthase/hydrolase SpoT low > 86
Escherichia coli Nissle 1917 0.73 ECOLIN_RS21440 phosphate ABC transporter permease PstA 0.41 ECOLIN_RS20790 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 55
Escherichia coli ECOR27 0.73 NOLOHH_07020 pstA phosphate ABC transporter permease PstA 0.41 NOLOHH_07435 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 75
Escherichia coli ECOR38 0.73 HEPCGN_13600 pstA phosphate ABC transporter permease PstA 0.41 HEPCGN_14375 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 87
Escherichia coli ECRC98 0.73 JDDGAC_18510 pstA phosphate ABC transporter permease PstA 0.41 JDDGAC_19180 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 86
Escherichia coli ECRC100 0.73 OKFHMN_14890 pstA phosphate ABC transporter permease PstA 0.41 OKFHMN_15555 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 80
Enterobacter sp. TBS_079 0.73 MPMX20_04641 Phosphate transport system permease protein PstA 0.41 MPMX20_00086 Bifunctional (p)ppGpp synthase/hydrolase SpoT low > 85
Escherichia coli BL21 0.73 ECD_03610 phosphate ABC transporter permease 0.41 ECD_03507 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 61
Escherichia coli ECRC99 0.73 KEDOAH_13260 pstA phosphate ABC transporter permease PstA 0.41 KEDOAH_12590 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_04327 Phosphate transport system permease protein PstA 0.41 OHPLBJKB_00051 Bifunctional (p)ppGpp synthase/hydrolase SpoT low > 73
Escherichia coli ECRC102 0.73 NIAGMN_12645 pstA phosphate ABC transporter permease PstA 0.41 NIAGMN_13315 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
Escherichia coli ECRC101 0.73 MCAODC_05395 pstA phosphate ABC transporter permease PstA 0.41 MCAODC_06065 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 87
Escherichia coli ECRC62 0.73 BNILDI_04505 pstA phosphate ABC transporter permease PstA 0.41 BNILDI_04080 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 75
Escherichia coli BW25113 0.72 b3726 pstA phosphate transporter subunit (NCBI) 0.41 b3650 spoT bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) low > 76
Rahnella sp. WP5 0.72 EX31_RS06060 phosphate ABC transporter permease PstA 0.41 EX31_RS15810 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 89
Klebsiella michiganensis M5al 0.72 BWI76_RS00150 phosphate transporter permease subunit PtsA 0.42 BWI76_RS27430 (p)ppGpp synthetase
Pantoea sp. MT58 0.72 IAI47_00225 phosphate ABC transporter permease PstA 0.41 IAI47_00510 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 76
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS14090 phosphate ABC transporter permease PstA 0.68 ABZR87_RS15225 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 80
Pectobacterium carotovorum WPP14 0.70 HER17_RS21685 phosphate ABC transporter permease PstA 0.41 HER17_RS21385 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 75
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS02140 phosphate transporter permease subunit PtsA 0.68 RALBFv3_RS03315 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 76
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS13460 phosphate transporter permease subunit PtsA 0.68 RR42_RS04920 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Ralstonia solanacearum UW163 0.70 UW163_RS15450 phosphate transporter permease subunit PtsA 0.68 UW163_RS10410 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Erwinia tracheiphila SCR3 0.70 LU632_RS24890 pstA phosphate ABC transporter permease PstA 0.41 LU632_RS22200 spoT bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 74
Ralstonia solanacearum PSI07 0.70 RPSI07_RS15305 phosphate ABC transporter, permease protein PstA 0.68 RPSI07_RS13870 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 81
Serratia liquefaciens MT49 0.69 IAI46_25185 phosphate ABC transporter permease PstA 0.41 IAI46_24895 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase low > 86
Dickeya dianthicola ME23 0.68 DZA65_RS22550 phosphate ABC transporter permease PstA 0.41 DZA65_RS22150 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
Dickeya dadantii 3937 0.68 DDA3937_RS21460 phosphate ABC transporter permease PstA 0.41 DDA3937_RS00180 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
Dickeya dianthicola 67-19 0.68 HGI48_RS21570 phosphate ABC transporter permease PstA 0.41 HGI48_RS21180 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
Variovorax sp. SCN45 0.67 GFF1094 Phosphate ABC transporter, permease protein PstA (TC 3.A.1.7.1) 0.52 GFF2375 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II
Variovorax sp. OAS795 0.64 ABID97_RS14605 phosphate ABC transporter permease PstA 0.52 ABID97_RS23670 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF4232 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) 0.50 GFF1034 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS06320 phosphate transport system permease PstA 0.56 HSERO_RS10635 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Acidovorax sp. GW101-3H11 0.58 Ac3H11_458 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) 0.53 Ac3H11_3664 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)
Castellaniella sp019104865 MT123 0.56 ABCV34_RS15595 phosphate ABC transporter permease PstA 0.54 ABCV34_RS03095 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Rhizobium sp. OAE497 0.54 ABIE40_RS07065 phosphate ABC transporter permease PstA 0.28 ABIE40_RS06050 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.80 7
Azospirillum sp. SherDot2 0.54 MPMX19_06034 Phosphate transport system permease protein PstA 0.33 MPMX19_00838 GTP pyrophosphokinase rsh low > 112
Lysobacter sp. OAE881 0.49 ABIE51_RS07535 phosphate ABC transporter permease PstA 0.40 ABIE51_RS17265 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Bosea sp. OAE506 0.48 ABIE41_RS08895 phosphate ABC transporter permease PstA 0.26 ABIE41_RS19890 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 77
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3104 phosphate ABC transporter membrane protein 2, PhoT family 0.44 Psyr_0209 RelA/SpoT protein
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3104 phosphate ABC transporter membrane protein 2, PhoT family 0.44 Psyr_0209 RelA/SpoT protein
Rhodopseudomonas palustris CGA009 0.47 TX73_024835 phosphate ABC transporter permease PstA 0.29 TX73_013955 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.3362.1 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) 0.40 Xcc-8004.1215.1 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS08240 phosphate ABC transporter permease PstA 0.42 ABZR86_RS11850 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS00465 phosphate ABC transporter permease PstA 0.41 LRK54_RS11795 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_06845 pstA phosphate ABC transporter permease PstA 0.41 OKGIIK_12100 spoT guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
Rhodanobacter denitrificans MT42 0.44 LRK55_RS00205 phosphate ABC transporter permease PstA 0.41 LRK55_RS11520 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Pseudomonas putida KT2440 0.32 PP_2658 phosphate ABC transporter 0.45 PP_5302 bifunctional (p)ppGpp synthase/hydrolase
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_26690 phosphate ABC transporter permease 0.44 AO356_12480 (p)ppGpp synthetase
Pseudomonas simiae WCS417 0.29 PS417_14260 phosphate ABC transporter permease 0.45 PS417_27830 (p)ppGpp synthetase
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS16160 phosphate ABC transporter permease PstA 0.45 PFLU_RS29510 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
Pseudomonas fluorescens SBW25 0.29 PFLU_RS16160 phosphate ABC transporter permease PstA 0.45 PFLU_RS29510 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
Bifidobacterium breve UCC2003 0.24 BBR_RS19155 phosphate ABC transporter, permease protein PstA 0.28 BBR_RS16410 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Mycobacterium tuberculosis H37Rv 0.24 Rv0930 Probable phosphate-transport integral membrane ABC transporter PstA1 0.30 Rv2583c Probable GTP pyrophosphokinase RelA (ATP:GTP 3'-pyrophosphotransferase) (PPGPP synthetase I) ((P)PPGPP synthetase) (GTP diphosphokinase) low > 58
Bacteroides thetaiotaomicron VPI-5482 0.22 BT1322 putative ABC transporter permease protein (NCBI ptt file) 0.26 BT3998 GTP pyrophosphokinase (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.21 BACOVA_00603 phosphate ABC transporter, permease protein PstA 0.26 BACOVA_04817 RelA/SpoT family protein
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_2442 pstA Phosphate transport system permease protein 2 0.30 Synpcc7942_1377 metal dependent phosphohydrolase
Vibrio cholerae E7946 ATCC 55056 0.19 CSW01_14380 phosphate ABC transporter, permease protein PstA 0.41 CSW01_13675 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase low > 62
Shewanella oneidensis MR-1 0.18 SO4290 pstA phosphate ABC transporter, permease protein (NCBI ptt file) 0.44 SO0359 spoT guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (NCBI ptt file) low > 76
Dechlorosoma suillum PS 0.18 Dsui_3054 phosphate ABC transporter, permease protein PstA 0.54 Dsui_0500 (p)ppGpp synthetase, RelA/SpoT family 0.38 48

Not shown: 1 genomes with orthologs for BPHYT_RS14135 only; 34 genomes with orthologs for BPHYT_RS15305 only