Conservation of cofitness between BPHYT_RS14945 and BPHYT_RS12615 in Burkholderia phytofirmans PsJN

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14945 phosphoglycolate phosphatase 1.0 BPHYT_RS12615 dihydrodipicolinate synthase 0.28 11
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_03931 phosphoglycolate phosphatase 0.93 H281DRAFT_00509 dihydrodipicolinate synthase
Paraburkholderia graminis OAS925 0.95 ABIE53_003164 2-phosphoglycolate phosphatase 0.92 ABIE53_002749 4-hydroxy-tetrahydrodipicolinate synthase
Paraburkholderia sabiae LMG 24235 0.88 QEN71_RS04040 HAD-IA family hydrolase 0.87 QEN71_RS05940 4-hydroxy-tetrahydrodipicolinate synthase
Ralstonia solanacearum UW163 0.58 UW163_RS16085 phosphoglycolate phosphatase 0.74 UW163_RS12360 4-hydroxy-tetrahydrodipicolinate synthase
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS13725 phosphoglycolate phosphatase 0.74 RALBFv3_RS14890 4-hydroxy-tetrahydrodipicolinate synthase
Ralstonia solanacearum PSI07 0.57 RPSI07_RS19745 phosphoglycolate phosphatase 0.75 RPSI07_RS18470 4-hydroxy-tetrahydrodipicolinate synthase low > 81
Ralstonia solanacearum GMI1000 0.57 RS_RS04460 phosphoglycolate phosphatase 0.74 RS_RS05700 4-hydroxy-tetrahydrodipicolinate synthase low > 80
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS09415 HAD-IA family hydrolase 0.74 ABZR87_RS10545 4-hydroxy-tetrahydrodipicolinate synthase
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS04430 phosphoglycolate phosphatase 0.73 RR42_RS06250 dihydrodipicolinate synthase low > 128
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2569 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.64 Ac3H11_277 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.44 33
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS18455 phosphoglycolate phosphatase 0.67 HSERO_RS16395 dihydrodipicolinate synthase
Variovorax sp. OAS795 0.49 ABID97_RS09545 HAD-IA family hydrolase 0.62 ABID97_RS20125 4-hydroxy-tetrahydrodipicolinate synthase low > 91
Variovorax sp. SCN45 0.48 GFF6189 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.63 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) low > 127
Castellaniella sp019104865 MT123 0.44 ABCV34_RS07135 HAD-IA family hydrolase 0.59 ABCV34_RS15825 4-hydroxy-tetrahydrodipicolinate synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF5338 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.61 GFF5565 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
Dechlorosoma suillum PS 0.42 Dsui_1933 2-phosphoglycolate phosphatase 0.65 Dsui_1977 dihydrodipicolinate synthase
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_3651 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.57 Psyr_1548 dihydrodipicolinate synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_3651 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.57 Psyr_1548 dihydrodipicolinate synthase
Pseudomonas stutzeri RCH2 0.40 Psest_2001 2-phosphoglycolate phosphatase, prokaryotic 0.55 Psest_1515 dihydrodipicolinate synthase
Pseudomonas fluorescens SBW25 0.38 PFLU_RS08065 N-acetylmuramic acid 6-phosphate phosphatase MupP 0.58 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS08065 N-acetylmuramic acid 6-phosphate phosphatase MupP 0.58 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase low > 109
Pseudomonas sp. RS175 0.38 PFR28_00900 N-acetylmuramic acid 6-phosphate phosphatase 0.57 PFR28_00699 4-hydroxy-tetrahydrodipicolinate synthase
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2526 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.58 Pf6N2E2_2747 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_03495 phosphoglycolate phosphatase 0.58 AO356_04530 4-hydroxy-tetrahydrodipicolinate synthase
Pseudomonas putida KT2440 0.37 PP_1764 Phosphoglycolate phosphatase 2 0.57 PP_1237 4-hydroxy-tetrahydrodipicolinate synthase low > 96
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_02100 phosphoglycolate phosphatase 0.56 AO353_17670 4-hydroxy-tetrahydrodipicolinate synthase
Pseudomonas simiae WCS417 0.37 PS417_08095 phosphoglycolate phosphatase 0.58 PS417_07165 dihydrodipicolinate synthase
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2318 2-phosphoglycolate phosphatase, prokaryotic 0.48 B158DRAFT_2444 dihydrodipicolinate synthase
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_357 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.58 Pf1N1B4_3332 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.2290.1 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.32 Xcc-8004.3085.1 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_2170 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.58 PfGW456L13_4507 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) low > 87
Marinobacter adhaerens HP15 0.35 HP15_1226 2-phosphoglycolate phosphatase, prokaryotic 0.51 HP15_2027 dihydrodipicolinate synthase
Pseudomonas sp. S08-1 0.34 OH686_20840 phosphoglycolate phosphatase, bacterial 0.58 OH686_19215 4-hydroxy-tetrahydrodipicolinate synthase
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_09515 gph phosphoglycolate phosphatase 0.31 OKGIIK_03855 dapA 4-hydroxy-tetrahydrodipicolinate synthase
Lysobacter sp. OAE881 0.34 ABIE51_RS13485 phosphoglycolate phosphatase 0.35 ABIE51_RS07995 4-hydroxy-tetrahydrodipicolinate synthase
Acinetobacter radioresistens SK82 0.33 MPMX26_00033 N-acetylmuramic acid 6-phosphate phosphatase 0.55 MPMX26_02982 4-hydroxy-tetrahydrodipicolinate synthase
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS08775 HAD-IA family hydrolase 0.37 ABZR86_RS00785 4-hydroxy-tetrahydrodipicolinate synthase
Shewanella sp. ANA-3 0.32 Shewana3_1970 HAD family hydrolase (RefSeq) 0.45 Shewana3_1656 dihydrodipicolinate synthase (RefSeq)
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS02460 phosphoglycolate phosphatase 0.34 LRK54_RS15085 4-hydroxy-tetrahydrodipicolinate synthase
Rhodanobacter denitrificans MT42 0.31 LRK55_RS02215 phosphoglycolate phosphatase 0.34 LRK55_RS14800 4-hydroxy-tetrahydrodipicolinate synthase
Shewanella oneidensis MR-1 0.30 SO2414 phosphoglycolate phosphatase, putative (NCBI ptt file) 0.45 SO1879 dapA dihydrodipicolinate synthase (NCBI ptt file)
Shewanella loihica PV-4 0.28 Shew_1947 HAD family hydrolase (RefSeq) 0.45 Shew_1848 dihydrodipicolinate synthase (RefSeq)
Shewanella amazonensis SB2B 0.28 Sama_1729 phosphoglycolate phosphatase (RefSeq) 0.43 Sama_1908 dihydrodipicolinate synthase (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_3662 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 0.35 Ga0059261_0213 4-hydroxy-tetrahydrodipicolinate synthase
Bosea sp. OAE506 0.22 ABIE41_RS20995 phosphoglycolate phosphatase 0.37 ABIE41_RS19960 4-hydroxy-tetrahydrodipicolinate synthase
Phaeobacter inhibens DSM 17395 0.20 PGA1_c10250 phosphoglycolate phosphatase-like protein 0.39 PGA1_c28930 dihydrodipicolinate synthase DapA
Rhodopseudomonas palustris CGA009 0.19 TX73_010205 HAD-IA family hydrolase 0.38 TX73_013920 4-hydroxy-tetrahydrodipicolinate synthase low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1029 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 0.33 Echvi_3959 dihydrodipicolinate synthase

Not shown: 0 genomes with orthologs for BPHYT_RS14945 only; 54 genomes with orthologs for BPHYT_RS12615 only