Conservation of cofitness between BPHYT_RS06610 and BPHYT_RS08955 in Burkholderia phytofirmans PsJN

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06610 triosephosphate isomerase 1.0 BPHYT_RS08955 homoserine dehydrogenase 0.75 19
Paraburkholderia graminis OAS925 0.88 ABIE53_001588 triosephosphate isomerase 0.95 ABIE53_002026 homoserine dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.87 H281DRAFT_04564 triosephosphate isomerase 0.98 H281DRAFT_00810 homoserine dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.80 QEN71_RS24165 triose-phosphate isomerase 0.94 QEN71_RS22405 homoserine dehydrogenase 0.69 31
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05495 triosephosphate isomerase 0.77 RR42_RS12540 homoserine dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS14895 triose-phosphate isomerase 0.75 ABZR87_RS11445 homoserine dehydrogenase — —
Ralstonia solanacearum GMI1000 0.59 RS_RS10360 triose-phosphate isomerase 0.72 RS_RS06655 homoserine dehydrogenase — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS14320 triose-phosphate isomerase 0.74 RPSI07_RS17490 homoserine dehydrogenase — —
Ralstonia solanacearum UW163 0.59 UW163_RS10735 triose-phosphate isomerase 0.74 UW163_RS13320 homoserine dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS02990 triose-phosphate isomerase 0.74 RALBFv3_RS15875 homoserine dehydrogenase — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1454 Triosephosphate isomerase (EC 5.3.1.1) 0.71 Ac3H11_1507 Homoserine dehydrogenase (EC 1.1.1.3) — —
Castellaniella sp019104865 MT123 0.51 ABCV34_RS01320 triose-phosphate isomerase 0.58 ABCV34_RS02295 homoserine dehydrogenase — —
Variovorax sp. SCN45 0.49 GFF4748 Triosephosphate isomerase (EC 5.3.1.1) 0.71 GFF2801 Homoserine dehydrogenase (EC 1.1.1.3) low > 127
Dechlorosoma suillum PS 0.49 Dsui_3052 triosephosphate isomerase 0.72 Dsui_2907 homoserine dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3679 Triosephosphate isomerase (EC 5.3.1.1) 0.72 GFF3935 Homoserine dehydrogenase (EC 1.1.1.3) — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS08805 triosephosphate isomerase 0.73 HSERO_RS10460 homoserine dehydrogenase — —
Variovorax sp. OAS795 0.45 ABID97_RS20510 triose-phosphate isomerase 0.71 ABID97_RS10890 homoserine dehydrogenase — —
Marinobacter adhaerens HP15 0.43 HP15_3071 triosephosphate isomerase 0.54 HP15_764 homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_05590 triosephosphate isomerase 0.63 AO353_04355 homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1164 Triosephosphate isomerase (EC 5.3.1.1) 0.63 Pf1N1B4_3013 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_14890 triose-phosphate isomerase 0.21 CA264_02380 homoserine dehydrogenase low > 74
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3356 Triosephosphate isomerase (EC 5.3.1.1) 0.63 Pf6N2E2_3143 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4184 triosephosphate isomerase 0.64 Psyr_1290 homoserine dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4184 triosephosphate isomerase 0.64 Psyr_1290 homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_07440 triosephosphate isomerase 0.63 AO356_06375 homoserine dehydrogenase — —
Pseudomonas sp. RS175 0.42 PFR28_00085 Triosephosphate isomerase 0.63 PFR28_00333 Homoserine dehydrogenase — —
Pseudomonas putida KT2440 0.42 PP_4715 triose phosphate isomerase 0.64 PP_1470 Homoserine dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_5091 Triosephosphate isomerase (EC 5.3.1.1) 0.63 PfGW456L13_1723 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas sp. S08-1 0.41 OH686_17115 triose-phosphate isomerase 0.63 OH686_17760 Homoserine dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS25840 triose-phosphate isomerase 0.64 PFLU_RS24550 homoserine dehydrogenase — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS25840 triose-phosphate isomerase 0.64 PFLU_RS24550 homoserine dehydrogenase — —
Pseudomonas simiae WCS417 0.41 PS417_24000 triosephosphate isomerase 0.64 PS417_22885 homoserine dehydrogenase — —
Pseudomonas stutzeri RCH2 0.38 Psest_0975 triosephosphate isomerase 0.64 Psest_3126 Homoserine dehydrogenase — —
Sinorhizobium meliloti 1021 0.37 SMc01023 triosephosphate isomerase 0.38 SMc00293 homoserine dehydrogenase low > 103
Synechococcus elongatus PCC 7942 0.37 Synpcc7942_1261 tpiA triosephosphate isomerase 0.37 Synpcc7942_2090 thrA homoserine dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_014970 triose-phosphate isomerase 0.32 TX73_012940 homoserine dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.37 AMB_RS09205 triose-phosphate isomerase 0.36 AMB_RS18865 homoserine dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c20650 triosephosphate isomerase TpiA 0.32 PGA1_c08650 homoserine dehydrogenase Hom — —
Azospirillum sp. SherDot2 0.35 MPMX19_01241 Triosephosphate isomerase 0.43 MPMX19_00805 Homoserine dehydrogenase — —
Rhizobium sp. OAE497 0.35 ABIE40_RS09645 triose-phosphate isomerase 0.37 ABIE40_RS08650 homoserine dehydrogenase — —
Agrobacterium fabrum C58 0.35 Atu1620 triosephosphate isomerase 0.38 Atu1588 homoserine dehydrogenase 0.68 23
Rhodospirillum rubrum S1H 0.35 Rru_A1889 Triosephosphate isomerase (NCBI) 0.39 Rru_A2410 Homoserine dehydrogenase (NCBI) — —
Bifidobacterium breve UCC2003 0.34 BBR_RS15540 triose-phosphate isomerase 0.33 BBR_RS19540 homoserine dehydrogenase — —
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU1677 tpiA triosephosphate isomerase (TIGR) 0.38 DVU0890 hom homoserine dehydrogenase (TIGR) — —
Caulobacter crescentus NA1000 0.33 CCNA_01970 triosephosphate isomerase 0.29 CCNA_01447 homoserine dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01970 triosephosphate isomerase 0.29 CCNA_01447 homoserine dehydrogenase — —
Mycobacterium tuberculosis H37Rv 0.33 Rv1438 Probable triosephosphate isomerase Tpi (TIM) 0.27 Rv1294 Probable homoserine dehydrogenase ThrA — —
Dinoroseobacter shibae DFL-12 0.33 Dshi_2078 Triose-phosphate isomerase (RefSeq) 0.36 Dshi_2273 Homoserine dehydrogenase (RefSeq) — —
Acinetobacter radioresistens SK82 0.32 MPMX26_00247 Triosephosphate isomerase 0.50 MPMX26_00167 Homoserine dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0254 triosephosphate isomerase (EC 5.3.1.1) 0.35 Ga0059261_2711 homoserine dehydrogenase (EC 1.1.1.3) (from data) — —
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0348 Triose-phosphate isomerase (RefSeq) 0.36 DvMF_1412 homoserine dehydrogenase (EC 1.1.1.3) (from data) — —

Not shown: 48 genomes with orthologs for BPHYT_RS06610 only; 2 genomes with orthologs for BPHYT_RS08955 only