Conservation of cofitness between BPHYT_RS14785 and BPHYT_RS08950 in Burkholderia phytofirmans PsJN

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14785 AsnC family transcriptional regulator 1.0 BPHYT_RS08950 aminotransferase 0.24 20
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_04288 transcriptional regulator, AsnC family 0.94 H281DRAFT_00809 alanine-synthesizing transaminase low > 103
Paraburkholderia graminis OAS925 0.98 ABIE53_003132 Lrp/AsnC family leucine-responsive transcriptional regulator 0.94 ABIE53_002025 alanine-synthesizing transaminase low > 113
Paraburkholderia sabiae LMG 24235 0.94 QEN71_RS04195 Lrp/AsnC ligand binding domain-containing protein 0.91 QEN71_RS22410 pyridoxal phosphate-dependent aminotransferase 0.49 84
Herbaspirillum seropedicae SmR1 0.84 HSERO_RS08380 AsnC family transcriptional regulator 0.75 HSERO_RS10455 aminotransferase low > 78
Cupriavidus basilensis FW507-4G11 0.83 RR42_RS04590 AsnC family transcriptional regulator 0.77 RR42_RS12545 aminotransferase low > 128
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS09565 Lrp/AsnC ligand binding domain-containing protein 0.77 ABZR87_RS11440 pyridoxal phosphate-dependent aminotransferase low > 80
Ralstonia solanacearum UW163 0.82 UW163_RS15935 AsnC family transcriptional regulator 0.78 UW163_RS13315 pyridoxal phosphate-dependent aminotransferase
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS13875 AsnC family transcriptional regulator 0.78 RALBFv3_RS15870 pyridoxal phosphate-dependent aminotransferase low > 76
Ralstonia solanacearum PSI07 0.81 RPSI07_RS19595 AsnC family transcriptional regulator 0.77 RPSI07_RS17495 pyridoxal phosphate-dependent aminotransferase low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS04610 AsnC family transcriptional regulator 0.78 RS_RS06650 pyridoxal phosphate-dependent aminotransferase low > 80
Pseudomonas sp. S08-1 0.72 OH686_13680 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.66 OH686_22575 Alanine transaminase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0234 transcriptional regulator, AsnC family 0.67 Psyr_3615 Aminotransferase, class I and II low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0234 transcriptional regulator, AsnC family 0.67 Psyr_3615 Aminotransferase, class I and II low > 86
Pseudomonas putida KT2440 0.71 PP_5271 DNA-binding transcriptional dual regulator, leucine-binding 0.67 PP_1872 glutamate-pyruvate aminotransferase low > 96
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_811 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.67 PfGW456L13_2252 Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_2143 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.67 Pf1N1B4_261 Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas simiae WCS417 0.70 PS417_27710 AsnC family transcriptional regulator 0.67 PS417_08560 aminotransferase low > 88
Pseudomonas fluorescens SBW25 0.70 PFLU_RS29385 AsnC family transcriptional regulator 0.67 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS29385 AsnC family transcriptional regulator 0.67 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase low > 109
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_09160 AsnC family transcriptional regulator 0.67 AO353_19150 aminotransferase low > 101
Pseudomonas sp. RS175 0.70 PFR28_04400 Leucine-responsive regulatory protein 0.67 PFR28_00984 Glutamate-pyruvate aminotransferase AlaA low > 88
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_12615 AsnC family transcriptional regulator 0.67 AO356_03090 aminotransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_4390 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.67 Pf6N2E2_2446 Aspartate aminotransferase (EC 2.6.1.1) low > 103
Pseudomonas stutzeri RCH2 0.69 Psest_3794 Transcriptional regulators 0.67 Psest_1772 Aspartate/tyrosine/aromatic aminotransferase low > 67
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.4622.1 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.36 Xcc-8004.1010.1 Aspartate aminotransferase (EC 2.6.1.1) 0.39 13
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS00595 winged helix-turn-helix transcriptional regulator 0.36 LRK54_RS11155 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 59
Rhodanobacter denitrificans MT42 0.66 LRK55_RS00365 winged helix-turn-helix transcriptional regulator 0.37 LRK55_RS10860 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 63
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_06660 lrp AsnC family transcriptional regulator 0.37 OKGIIK_12720 aspB aminotransferase low > 52
Variovorax sp. OAS795 0.64 ABID97_RS22380 winged helix-turn-helix transcriptional regulator 0.75 ABID97_RS10885 pyridoxal phosphate-dependent aminotransferase low > 91
Variovorax sp. SCN45 0.63 GFF1774 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.75 GFF2803 Alanine transaminase (EC 2.6.1.2) low > 127
Shewanella amazonensis SB2B 0.58 Sama_1771 leucine-responsive transcriptional regulator (RefSeq) 0.65 Sama_1697 aminotransferase AlaT (RefSeq) low > 62
Shewanella loihica PV-4 0.57 Shew_2025 leucine-responsive transcriptional regulator (RefSeq) 0.65 Shew_1914 aminotransferase AlaT (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_09530 leucine-responsive transcriptional regulator Lrp 0.68 CSW01_09870 pyridoxal phosphate-dependent aminotransferase
Shewanella sp. ANA-3 0.56 Shewana3_2049 leucine-responsive transcriptional regulator (RefSeq) 0.64 Shewana3_2145 aminotransferase AlaT (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO2305 lrp leucine-responsive regulatory protein (NCBI ptt file) 0.64 SO2483 aspartate aminotransferase, putative (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.56 DZA65_RS09915 leucine-responsive transcriptional regulator Lrp 0.66 DZA65_RS14995 pyridoxal phosphate-dependent aminotransferase low > 75
Pectobacterium carotovorum WPP14 0.56 HER17_RS12360 leucine-responsive transcriptional regulator Lrp 0.65 HER17_RS07115 pyridoxal phosphate-dependent aminotransferase low > 75
Dickeya dianthicola 67-19 0.56 HGI48_RS09605 leucine-responsive transcriptional regulator Lrp 0.66 HGI48_RS14320 pyridoxal phosphate-dependent aminotransferase low > 71
Dickeya dadantii 3937 0.56 DDA3937_RS09590 leucine-responsive transcriptional regulator Lrp 0.66 DDA3937_RS14345 pyridoxal phosphate-dependent aminotransferase low > 74
Klebsiella michiganensis M5al 0.56 BWI76_RS09655 leucine-responsive regulatory protein 0.67 BWI76_RS20205 aminotransferase AlaT low > 92
Rahnella sp. WP5 0.55 EX31_RS18530 leucine-responsive transcriptional regulator Lrp 0.62 EX31_RS19445 pyridoxal phosphate-dependent aminotransferase low > 89
Escherichia coli ECRC101 0.55 MCAODC_24965 lrp leucine-responsive transcriptional regulator Lrp 0.67 MCAODC_13865 alaA alanine transaminase AlaA low > 87
Escherichia fergusonii Becca 0.55 EFB2_03172 Leucine-responsive regulatory protein 0.67 EFB2_01568 Glutamate-pyruvate aminotransferase AlaA low > 86
Serratia liquefaciens MT49 0.55 IAI46_08555 leucine-responsive transcriptional regulator Lrp 0.66 IAI46_17720 pyridoxal phosphate-dependent aminotransferase 0.42 51
Escherichia coli ECRC99 0.55 KEDOAH_22160 lrp leucine-responsive transcriptional regulator Lrp 0.67 KEDOAH_05370 alaA alanine transaminase AlaA
Escherichia coli ECRC98 0.55 JDDGAC_09385 lrp leucine-responsive transcriptional regulator Lrp 0.67 JDDGAC_26790 alaA alanine transaminase AlaA low > 86
Escherichia coli BW25113 0.55 b0889 lrp DNA-binding transcriptional dual regulator, leucine-binding (NCBI) 0.67 b2290 yfbQ aspartate aminotransferase (NCBI) low > 76
Pantoea sp. MT58 0.55 IAI47_12915 leucine-responsive transcriptional regulator Lrp 0.66 IAI47_06350 pyridoxal phosphate-dependent aminotransferase low > 76
Escherichia coli ECRC102 0.55 NIAGMN_03295 lrp leucine-responsive transcriptional regulator Lrp 0.67 NIAGMN_20595 alaA alanine transaminase AlaA
Escherichia coli ECRC100 0.55 OKFHMN_05575 lrp leucine-responsive transcriptional regulator Lrp 0.67 OKFHMN_22825 alaA alanine transaminase AlaA low > 80
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2043 transcriptional regulator, AsnC family 0.67 EX28DRAFT_0319 Aspartate/tyrosine/aromatic aminotransferase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_02779 Leucine-responsive regulatory protein 0.67 OHPLBJKB_01415 Glutamate-pyruvate aminotransferase AlaA low > 73
Escherichia coli ECOR38 0.55 HEPCGN_22935 lrp leucine-responsive transcriptional regulator Lrp 0.67 HEPCGN_22030 alaA alanine transaminase AlaA low > 87
Escherichia coli BL21 0.55 ECD_00893 leucine-responsive global transcriptional regulator 0.67 ECD_02215 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase low > 61
Erwinia tracheiphila SCR3 0.55 LU632_RS09740 lrp leucine-responsive transcriptional regulator Lrp 0.65 LU632_RS07955 pyridoxal phosphate-dependent aminotransferase 0.70 56
Enterobacter sp. TBS_079 0.55 MPMX20_01551 Leucine-responsive regulatory protein 0.67 MPMX20_03220 Glutamate-pyruvate aminotransferase AlaA low > 85
Escherichia coli ECRC62 0.55 BNILDI_20400 lrp leucine-responsive transcriptional regulator Lrp 0.67 BNILDI_13365 alaA alanine transaminase AlaA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4893 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.67 GFF1894 Aspartate aminotransferase (EC 2.6.1.1) low > 78
Escherichia coli Nissle 1917 0.55 ECOLIN_RS04730 leucine-responsive transcriptional regulator Lrp 0.67 ECOLIN_RS13295 alanine transaminase AlaA low > 55
Escherichia coli ECOR27 0.55 NOLOHH_22145 lrp leucine-responsive transcriptional regulator Lrp 0.67 NOLOHH_14445 alaA alanine transaminase AlaA low > 75
Alteromonas macleodii MIT1002 0.54 MIT1002_02181 Leucine-responsive regulatory protein 0.61 MIT1002_02306 Glutamate-pyruvate aminotransferase AlaA low > 70
Acidovorax sp. GW101-3H11 0.52 Ac3H11_2849 PutR, transcriptional activator of PutA and PutP 0.76 Ac3H11_1508 Aspartate aminotransferase (EC 2.6.1.1) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2725 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 0.75 GFF3934 Aspartate aminotransferase (EC 2.6.1.1) low > 90
Acinetobacter radioresistens SK82 0.45 MPMX26_01467 Leucine-responsive regulatory protein 0.66 MPMX26_01871 Glutamate-pyruvate aminotransferase AlaA low > 36
Marinobacter adhaerens HP15 0.42 HP15_2690 transcriptional regulator, AsnC family 0.63 HP15_2095 aspartate aminotransferase low > 73
Mycobacterium tuberculosis H37Rv 0.25 Rv3291c Probable transcriptional regulatory protein LrpA (Lrp/AsnC-family) 0.60 Rv0337c Probable aspartate aminotransferase AspC (transaminase A) (ASPAT)

Not shown: 13 genomes with orthologs for BPHYT_RS14785 only; 6 genomes with orthologs for BPHYT_RS08950 only