Conservation of cofitness between BNILDI_11920 and BNILDI_05165 in Escherichia coli ECRC62

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.0 BNILDI_05165 yigZ IMPACT family protein 0.62 9
Escherichia coli BW25113 1.00 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) 1.00 b3848 yigZ orf, hypothetical protein (VIMSS) low > 76
Escherichia coli BL21 1.00 ECD_02456 putative 4Fe-4S cluster-containing protein 0.99 ECD_03739 UPF0029 family protein low > 61
Escherichia coli ECOR27 1.00 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NOLOHH_06365 yigZ IMPACT family protein low > 75
Escherichia coli ECRC102 0.99 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NIAGMN_11990 yigZ IMPACT family protein
Escherichia coli ECRC99 0.99 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 KEDOAH_13915 yigZ IMPACT family protein
Escherichia coli ECOR38 0.99 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 HEPCGN_12865 yigZ IMPACT family protein low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01145 Ferredoxin YfhL 1.00 OHPLBJKB_04205 IMPACT family member YigZ low > 73
Escherichia coli ECRC100 0.99 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 OKFHMN_14235 yigZ IMPACT family protein low > 80
Escherichia coli ECRC101 0.99 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 MCAODC_04740 yigZ IMPACT family protein low > 87
Escherichia coli ECRC98 0.99 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 JDDGAC_17860 yigZ IMPACT family protein low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL 1.00 ECOLIN_RS22190 IMPACT family protein
Escherichia fergusonii Becca 0.98 EFB2_01334 Ferredoxin YfhL 1.00 EFB2_04769 IMPACT family member YigZ low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding 0.91 GFF275 FIG000605: protein co-occurring with transport systems (COG1739) low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_0084 4Fe-4S dicluster domain 0.81 EX28DRAFT_4512 Uncharacterized conserved protein low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_03433 Ferredoxin YfhL 0.80 MPMX20_04434 IMPACT family member YigZ low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS21295 ferredoxin 0.80 BWI76_RS01380 YigZ family protein
Serratia liquefaciens MT49 0.84 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin 0.67 IAI46_01145 IMPACT family protein low > 86
Pectobacterium carotovorum WPP14 0.83 HER17_RS05840 YfhL family 4Fe-4S dicluster ferredoxin 0.62 HER17_RS20540 IMPACT family protein low > 75
Dickeya dadantii 3937 0.81 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin 0.53 DDA3937_RS20240 IMPACT family protein low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin 0.60 HGI48_RS00985 IMPACT family protein low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin 0.59 DZA65_RS01045 IMPACT family protein low > 75
Rahnella sp. WP5 0.79 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin 0.63 EX31_RS14555 IMPACT family protein low > 89
Erwinia tracheiphila SCR3 0.78 LU632_RS15360 YfhL family 4Fe-4S dicluster ferredoxin 0.65 LU632_RS23940 IMPACT family protein
Pantoea sp. MT58 0.75 IAI47_04905 YfhL family 4Fe-4S dicluster ferredoxin 0.66 IAI47_18220 IMPACT family protein low > 76
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_03745 ferredoxin 0.41 CSW01_13965 YigZ family protein low > 62
Ralstonia solanacearum UW163 0.61 UW163_RS02500 4Fe-4S dicluster domain-containing protein 0.28 UW163_RS05055 DUF1949 domain-containing protein
Ralstonia solanacearum PSI07 0.61 RPSI07_RS22220 4Fe-4S dicluster domain-containing protein 0.27 RPSI07_RS08670 DUF1949 domain-containing protein
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS02000 ferredoxin 0.26 RR42_RS36810 hypothetical protein
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS11080 4Fe-4S dicluster domain-containing protein 0.28 RALBFv3_RS08555 DUF1949 domain-containing protein
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS06970 YfhL family 4Fe-4S dicluster ferredoxin 0.27 ABZR87_RS03870 YigZ family protein low > 80
Ralstonia solanacearum GMI1000 0.59 RS_RS01930 4Fe-4S dicluster domain-containing protein 0.27 RS_RS16420 DUF1949 domain-containing protein
Shewanella amazonensis SB2B 0.59 Sama_1002 ferredoxin, 4Fe-4S (RefSeq) 0.42 Sama_0034 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.58 Shew_2785 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.45 Shew_0021 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.58 Shewana3_1067 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.41 Shewana3_0026 hypothetical protein (RefSeq)
Shewanella oneidensis MR-1 0.58 SO1251 ferredoxin, 4Fe-4S (NCBI ptt file) 0.44 SO0023 conserved hypothetical protein TIGR00257 (NCBI ptt file)
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS20685 ferredoxin 0.25 HSERO_RS06895 hypothetical protein
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS01675 YfhL family 4Fe-4S dicluster ferredoxin 0.24 QEN71_RS14600 YigZ family protein low > 153
Acidovorax sp. GW101-3H11 0.58 Ac3H11_4828 Ferredoxin 0.24 Ac3H11_4125 FIG000605: protein co-occurring with transport systems (COG1739) low > 79
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.31 Psyr_0674 Protein of unknown function UPF0029
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.31 Psyr_0674 Protein of unknown function UPF0029
Alteromonas macleodii MIT1002 0.57 MIT1002_02343 putative ferredoxin-like protein 0.36 MIT1002_00893 IMPACT family member YigZ low > 70
Acinetobacter radioresistens SK82 0.55 MPMX26_00739 Ferredoxin 0.29 MPMX26_01960 IMPACT family member YigZ low > 36
Pseudomonas sp. RS175 0.55 PFR28_04270 Ferredoxin 0.29 PFR28_05259 IMPACT family member YigZ
Paraburkholderia graminis OAS925 0.55 ABIE53_000703 ferredoxin 0.23 ABIE53_005094 putative YigZ family protein low > 113
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_4571 4Fe-4S ferredoxin, iron-sulfur binding 0.28 Pf6N2E2_3466 FIG000605: protein co-occurring with transport systems (COG1739)
Pseudomonas putida KT2440 0.55 PP_5124 putative 4Fe-4S cluster-containing protein 0.29 PP_0593 putative ribosome-binding factor
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_13280 ferredoxin 0.28 AO356_07970 thymidylate synthase
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2311 4Fe-4S ferredoxin, iron-sulfur binding 0.27 Pf1N1B4_1242 FIG000605: protein co-occurring with transport systems (COG1739)
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_980 4Fe-4S ferredoxin, iron-sulfur binding 0.29 PfGW456L13_6 FIG000605: protein co-occurring with transport systems (COG1739)
Pseudomonas simiae WCS417 0.55 PS417_26865 ferredoxin 0.28 PS417_03225 thymidylate synthase
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.28 PFLU_RS03305 YigZ family protein
Pseudomonas fluorescens SBW25 0.55 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.28 PFLU_RS03305 YigZ family protein low > 109
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS02825 ferredoxin 0.26 BPHYT_RS29795 elongation factor low > 109
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_08310 ferredoxin 0.27 AO353_06100 thymidylate synthase
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_0772 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 0.32 B158DRAFT_0358 uncharacterized protein, YigZ family
Pseudomonas stutzeri RCH2 0.51 Psest_0243 hypothetical protein 0.29 Psest_0744 Uncharacterized conserved protein low > 67
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS13355 YfhL family 4Fe-4S dicluster ferredoxin 0.29 LRK54_RS17130 IMPACT family protein low > 59
Lysobacter sp. OAE881 0.48 ABIE51_RS15110 YfhL family 4Fe-4S dicluster ferredoxin 0.29 ABIE51_RS13780 YigZ family protein
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02595 nuoI Ferredoxin 0.29 OKGIIK_07755 yIH1 Thymidylate synthase low > 52
Rhodanobacter denitrificans MT42 0.47 LRK55_RS13095 YfhL family 4Fe-4S dicluster ferredoxin 0.29 LRK55_RS16840 YigZ family protein low > 63
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.2157.1 4Fe-4S ferredoxin, iron-sulfur binding 0.24 Xcc-8004.3416.1 FIG000605: protein co-occurring with transport systems (COG1739)
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS20005 YfhL family 4Fe-4S dicluster ferredoxin 0.30 ABZR86_RS07050 YigZ family protein low > 74
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_00950 ferredoxin 0.22 CA264_00265 YigZ family protein
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2528 hypothetical protein 0.20 Echvi_2819 Uncharacterized conserved protein
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS03585 ferredoxin 0.24 CA265_RS09540 YigZ family protein
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS06810 4Fe-4S dicluster domain-containing protein 0.24 ABZR88_RS10200 YigZ family protein

Not shown: 5 genomes with orthologs for BNILDI_11920 only; 16 genomes with orthologs for BNILDI_05165 only