Conservation of cofitness between Atu2747 and Atu2548 in Agrobacterium fabrum C58

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2747 hypothetical protein 1.0 Atu2548 phosphoribosylaminoimidazole-succinocarboxamide synthase 0.89 5
Rhizobium sp. OAE497 0.76 ABIE40_RS19180 YggS family pyridoxal phosphate-dependent enzyme 0.84 ABIE40_RS15345 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Azospirillum brasilense Sp245 0.62 AZOBR_RS01870 alanine racemase 0.70 AZOBR_RS18325 phosphoribosylaminoimidazole-succinocarboxamide synthase
Magnetospirillum magneticum AMB-1 0.61 AMB_RS00120 YggS family pyridoxal phosphate-dependent enzyme 0.64 AMB_RS10255 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Azospirillum sp. SherDot2 0.60 MPMX19_00050 Pyridoxal phosphate homeostasis protein 0.67 MPMX19_05727 Phosphoribosylaminoimidazole-succinocarboxamide synthase low > 112
Rhodopseudomonas palustris CGA009 0.59 TX73_001485 YggS family pyridoxal phosphate-dependent enzyme 0.27 TX73_002890 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 86
Bosea sp. OAE506 0.58 ABIE41_RS04720 YggS family pyridoxal phosphate-dependent enzyme 0.75 ABIE41_RS20895 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 77
Ralstonia solanacearum GMI1000 0.53 RS_RS20395 YggS family pyridoxal phosphate-dependent enzyme 0.29 RS_RS02875 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_03861 pyridoxal 5'-phosphate dependent enzyme class III 0.69 CCNA_03351 phosphoribosylamidoimidazole-succinocarboxamide synthase low > 67
Caulobacter crescentus NA1000 0.51 CCNA_03861 pyridoxal 5'-phosphate dependent enzyme class III 0.69 CCNA_03351 phosphoribosylamidoimidazole-succinocarboxamide synthase 0.63 29
Ralstonia solanacearum PSI07 0.51 RPSI07_RS02580 YggS family pyridoxal phosphate-dependent enzyme 0.29 RPSI07_RS21140 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Ralstonia solanacearum UW163 0.51 UW163_RS18890 YggS family pyridoxal phosphate-dependent enzyme 0.30 UW163_RS01420 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS20285 YggS family pyridoxal phosphate-dependent enzyme 0.30 RALBFv3_RS12190 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Shewanella loihica PV-4 0.37 Shew_1137 alanine racemase domain-containing protein (RefSeq) 0.17 Shew_2211 phosphoribosylaminoimidazole-succinocarboxamidesynthase (RefSeq) low > 60
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS18995 hypothetical protein 0.28 HSERO_RS03360 phosphoribosylaminoimidazole-succinocarboxamide synthase
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS26595 YggS family pyridoxal phosphate-dependent enzyme 0.32 QEN71_RS02440 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 153
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS03495 hypothetical protein 0.32 BPHYT_RS16255 phosphoribosylaminoimidazole-succinocarboxamide synthase low > 109
Paraburkholderia graminis OAS925 0.34 ABIE53_000841 pyridoxal phosphate enzyme (YggS family) 0.32 ABIE53_003425 phosphoribosylaminoimidazole-succinocarboxamide synthase
Shewanella sp. ANA-3 0.34 Shewana3_1194 hypothetical protein (RefSeq) 0.17 Shewana3_3622 phosphoribosylaminoimidazole-succinocarboxamide synthase (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04680 hypothetical protein 0.32 H281DRAFT_04187 phosphoribosylaminoimidazole-succinocarboxamide synthase
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS01225 YggS family pyridoxal phosphate-dependent enzyme 0.29 ABZR87_RS08080 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Shewanella amazonensis SB2B 0.33 Sama_2477 hypothetical protein (RefSeq) 0.18 Sama_0491 phosphoribosylaminoimidazole-succinocarboxamide synthase (RefSeq) low > 62
Castellaniella sp019104865 MT123 0.33 ABCV34_RS02955 YggS family pyridoxal phosphate-dependent enzyme 0.28 ABCV34_RS00555 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Variovorax sp. OAS795 0.32 ABID97_RS00250 YggS family pyridoxal phosphate-dependent enzyme 0.31 ABID97_RS01730 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS02905 YggS family pyridoxal phosphate-dependent enzyme 0.30 LRK54_RS11375 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 59
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF2722 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 0.27 GFF2773 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
Shewanella oneidensis MR-1 0.32 SO3352 conserved hypothetical protein TIGR00044 (NCBI ptt file) 0.17 SO4066 phosphoribosylaminoimidazole-succinocarboxamide synthase, putative (NCBI ptt file) low > 76
Rhodanobacter denitrificans MT42 0.32 LRK55_RS02655 YggS family pyridoxal phosphate-dependent enzyme 0.30 LRK55_RS11105 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 63
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_0196 pyridoxal phosphate enzyme, YggS family 0.18 B158DRAFT_0798 phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio type
Variovorax sp. SCN45 0.31 GFF3744 Pyridoxal phosphate-containing protein YggS 0.32 GFF5509 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
Lysobacter sp. OAE881 0.31 ABIE51_RS16060 YggS family pyridoxal phosphate-dependent enzyme 0.26 ABIE51_RS04125 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 62
Pseudomonas sp. S08-1 0.30 OH686_10975 Pyridoxal phosphate-containing protein YggS 0.29 OH686_19225 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU0051 conserved hypothetical protein TIGR00044 (TIGR) 0.27 DVU0795 purC phosphoribosylaminoimidazole-succinocarboxamide synthase (TIGR)
Dechlorosoma suillum PS 0.30 Dsui_0603 pyridoxal phosphate enzyme, YggS family 0.27 Dsui_0048 phosphoribosylaminoimidazole-succinocarboxamide synthase
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS09305 YggS family pyridoxal phosphate-dependent enzyme 0.29 ABZR86_RS12215 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_09885 Pyridoxal phosphate homeostasis protein 0.30 OKGIIK_12450 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase
Pseudomonas stutzeri RCH2 0.29 Psest_0284 pyridoxal phosphate enzyme, YggS family 0.30 Psest_1517 phosphoribosylaminoimidazole-succinocarboxamide synthase
Acidovorax sp. GW101-3H11 0.29 Ac3H11_4474 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 0.32 Ac3H11_679 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS17355 hypothetical protein 0.31 RR42_RS03220 phosphoribosylaminoimidazole-succinocarboxamide synthase
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_2208 alanine racemase domain protein (RefSeq) 0.26 DvMF_2815 phosphoribosylaminoimidazole-succinocarboxamide synthase (RefSeq) low > 51
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS15965 YggS family pyridoxal phosphate-dependent enzyme 0.40 HMPREF1078_RS14210 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS11740 YggS family pyridoxal phosphate-dependent enzyme 0.37 ABZR88_RS09265 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Bacteroides thetaiotaomicron VPI-5482 0.25 BT1332 conserved hypothetical protein (NCBI ptt file) 0.42 BT4217 phosphoribosylamidoimidazole-succinocarboxamide synthase (NCBI ptt file)
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.1711.1 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 0.28 Xcc-8004.601.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_2233 pyridoxal phosphate enzyme, YggS family 0.38 Echvi_3707 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Bacteroides ovatus ATCC 8483 0.24 BACOVA_00593 pyridoxal phosphate enzyme, YggS family 0.42 BACOVA_05068 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS10865 YggS family pyridoxal phosphate-dependent enzyme 0.41 HMPREF1181_RS06310 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 56
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_06410 YggS family pyridoxal phosphate enzyme 0.37 CA264_09280 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS06285 YggS family pyridoxal phosphate enzyme 0.37 CA265_RS09030 phosphoribosylaminoimidazolesuccinocarboxamide synthase
Mycobacterium tuberculosis H37Rv 0.21 Rv2148c Conserved protein 0.27 Rv0780 Phosphoribosylaminoimidazole-succinocarboxamide synthase PurC (SAICAR synthetase)
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS06240 YggS family pyridoxal phosphate-dependent enzyme 0.41 HMPREF1058_RS16760 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 67
Phocaeicola dorei CL03T12C01 0.21 ABI39_RS20000 YggS family pyridoxal phosphate-dependent enzyme 0.42 ABI39_RS12675 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 72

Not shown: 49 genomes with orthologs for Atu2747 only; 0 genomes with orthologs for Atu2548 only