| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu1515 | | hypothetical protein | 1.0 | Atu0876 | | superoxide dismutase | 0.20 | 19 |
| Rhizobium sp. OAE497 | 0.72 | ABIE40_RS10895 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.92 | ABIE40_RS22300 | | superoxide dismutase | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.60 | SMc04235 | | tRNA-dihydrouridine synthase A | 0.88 | SMc00043 | | superoxide dismutase Fe protein | — | — |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_0718 | | tRNA-dihydrouridine synthase A (RefSeq) | 0.42 | Shewana3_1639 | | manganese and iron superoxide dismutase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.53 | SO3912 | | TIM-barrel protein, yjbN family (NCBI ptt file) | 0.42 | SO2881 | SodB | superoxide dismutase, Fe (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.53 | Sama_3055 | | tRNA-dihydrouridine synthase A (RefSeq) | 0.42 | Sama_1920 | | superoxide dismutase (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.53 | Shew_0536 | | tRNA-dihydrouridine synthase A (RefSeq) | 0.43 | Shew_1834 | | superoxide dismutase (RefSeq) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.52 | A4249_RS10515 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.46 | A4249_RS00445 | | superoxide dismutase | — | — |
| Bosea sp. OAE506 | 0.52 | ABIE41_RS21285 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.69 | ABIE41_RS22480 | | superoxide dismutase | low | > 77 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS15935 | | tRNA-dihydrouridine synthase A | 0.57 | AZOBR_RS15415 | | superoxide dismutase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_01985 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.43 | CSW01_10230 | | superoxide dismutase [Fe] | — | — |
| Synechococcus elongatus PCC 7942 | 0.52 | Synpcc7942_2066 | | tRNA-dihydrouridine synthase A | 0.52 | Synpcc7942_0801 | sodB | Superoxide dismutase | — | — |
| Azospirillum sp. SherDot2 | 0.51 | MPMX19_00670 | | tRNA-dihydrouridine(20/20a) synthase | 0.56 | MPMX19_01161 | | Superoxide dismutase [Fe] | — | — |
| Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_4263 | | tRNA dihydrouridine synthase A | 0.45 | EX28DRAFT_1653 | | Superoxide dismutase | low | > 76 |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_010150 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.76 | TX73_008710 | | superoxide dismutase | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS03680 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.42 | HER17_RS21110 | | superoxide dismutase [Mn] | — | — |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS17480 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.41 | DDA3937_RS20960 | | superoxide dismutase [Mn] | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF1418 | | tRNA dihydrouridine synthase A (EC 1.-.-.-) | 0.46 | GFF3619 | | Superoxide dismutase [Fe] (EC 1.15.1.1) | low | > 78 |
| Dickeya dianthicola ME23 | 0.50 | DZA65_RS18620 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.39 | DZA65_RS00285 | | superoxide dismutase [Mn] | — | — |
| Escherichia coli BL21 | 0.50 | ECD_03921 | | tRNA-dihydrouridine synthase A | 0.45 | ECD_01626 | | superoxide dismutase, Fe | — | — |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_15205 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | KEDOAH_00705 | sodB | superoxide dismutase [Fe] | — | — |
| Pantoea sp. MT58 | 0.50 | IAI47_17865 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.40 | IAI47_18725 | | superoxide dismutase [Mn] | — | — |
| Escherichia fergusonii Becca | 0.50 | EFB2_04556 | | tRNA-dihydrouridine(20/20a) synthase | 0.45 | EFB2_02337 | | Superoxide dismutase [Fe] | low | > 86 |
| Rahnella sp. WP5 | 0.50 | EX31_RS11865 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.42 | EX31_RS05785 | | superoxide dismutase [Mn] | low | > 89 |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_11560 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | HEPCGN_05790 | sodB | superoxide dismutase [Fe] | low | > 85 |
| Escherichia coli ECRC101 | 0.50 | OKFHMN_12945 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | OKFHMN_27405 | sodB | superoxide dismutase [Fe] | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_03994 | | tRNA-dihydrouridine(20/20a) synthase | 0.45 | OHPLBJKB_02069 | | Superoxide dismutase [Fe] | low | > 73 |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_16580 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | JDDGAC_01995 | sodB | superoxide dismutase [Fe] | — | — |
| Escherichia coli ECRC62 | 0.50 | BNILDI_06330 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | BNILDI_16715 | sodB | superoxide dismutase [Fe] | — | — |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_05195 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | NOLOHH_17925 | sodB | superoxide dismutase [Fe] | — | — |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_10790 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | NIAGMN_00660 | sodB | superoxide dismutase [Fe] | — | — |
| Escherichia coli BW25113 | 0.50 | b4049 | dusA | tRNA-dihydrouridine synthase A (RefSeq) | 0.45 | b1656 | sodB | superoxide dismutase, Fe (NCBI) | low | > 76 |
| Dickeya dianthicola 67-19 | 0.50 | HGI48_RS17540 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.40 | HGI48_RS00285 | | superoxide dismutase [Mn] | — | — |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS23355 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | ECOLIN_RS09230 | | superoxide dismutase [Fe] | — | — |
| Escherichia coli ECRC101 | 0.49 | MCAODC_03455 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | MCAODC_18005 | sodB | superoxide dismutase [Fe] | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_1936 | | tRNA-U16,U17-dihydrouridine synthase | 0.47 | Psyr_4059 | | Superoxide dismutase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_1936 | | tRNA-U16,U17-dihydrouridine synthase | 0.47 | Psyr_4059 | | Superoxide dismutase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.5010.1 | | tRNA dihydrouridine synthase A | 0.44 | Xcc-8004.2280.1 | | Manganese superoxide dismutase (EC 1.15.1.1) | — | — |
| Lysobacter sp. OAE881 | 0.47 | ABIE51_RS03925 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | ABIE51_RS15385 | | Fe-Mn family superoxide dismutase | — | — |
| Erwinia tracheiphila SCR3 | 0.46 | LU632_RS23765 | dusA | tRNA dihydrouridine(20/20a) synthase DusA | 0.41 | LU632_RS00125 | sodA | superoxide dismutase [Mn] | — | — |
| Pseudomonas putida KT2440 | 0.46 | PP_2169 | | tRNA-dihydrouridine synthase A | 0.48 | PP_0915 | | superoxide dismutase (Fe) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_2257 | | tRNA dihydrouridine synthase A | 0.49 | Pf6N2E2_2851 | | Superoxide dismutase [Fe] (EC 1.15.1.1) | — | — |
| Pseudomonas simiae WCS417 | 0.46 | PS417_07740 | | tRNA-dihydrouridine synthase A | 0.49 | PS417_22180 | | superoxide dismutase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.46 | HSERO_RS17905 | | tRNA-dihydrouridine synthase A | 0.44 | HSERO_RS05845 | | superoxide dismutase | — | — |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS07810 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.48 | PFLU_RS23805 | | superoxide dismutase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS07810 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.48 | PFLU_RS23805 | | superoxide dismutase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_02170 | | tRNA-dihydrouridine synthase A | 0.49 | AO356_05005 | | superoxide dismutase | — | — |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_2706 | | tRNA dihydrouridine synthase A | 0.47 | Psest_1164 | | Superoxide dismutase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS22650 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.44 | QEN71_RS02840 | | Fe-Mn family superoxide dismutase | — | — |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS08700 | | tRNA-dihydrouridine synthase A | 0.44 | BPHYT_RS15860 | | superoxide dismutase | — | — |
| Marinobacter adhaerens HP15 | 0.45 | HP15_2240 | | tRNA-dihydrouridine synthase, TIM-barrel, YjbN | 0.43 | HP15_2351 | | superoxide dismutase, Fe | — | — |
| Pseudomonas sp. RS175 | 0.44 | PFR28_01143 | | tRNA-dihydrouridine(20/20a) synthase | 0.49 | PFR28_00606 | | Superoxide dismutase [Fe] | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.44 | Pf1N1B4_57 | | tRNA dihydrouridine synthase A | 0.48 | Pf1N1B4_711 | | Superoxide dismutase [Fe] (EC 1.15.1.1) | — | — |
| Pseudomonas sp. S08-1 | 0.44 | OH686_22745 | | tRNA-dihydrouridine(20/20a) synthase | 0.47 | OH686_07215 | | Superoxide dismutase [Fe] | — | — |
| Rhodospirillum rubrum S1H | 0.44 | Rru_A1621 | | Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) | 0.49 | Rru_A1760 | | Superoxide dismutase (NCBI) | — | — |
| Paraburkholderia graminis OAS925 | 0.44 | ABIE53_001975 | | tRNA-dihydrouridine synthase A | 0.44 | ABIE53_003343 | | Fe-Mn family superoxide dismutase | — | — |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS17630 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.48 | RPSI07_RS12240 | | superoxide dismutase | — | — |
| Variovorax sp. SCN45 | 0.44 | GFF928 | | tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) | 0.44 | GFF3506 | | Superoxide dismutase [Fe] (EC 1.15.1.1) | low | > 127 |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS11300 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.47 | ABZR87_RS00705 | | superoxide dismutase [Fe] | — | — |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS13175 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.48 | UW163_RS08570 | | superoxide dismutase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_00295 | | tRNA-dihydrouridine synthase A | 0.48 | AO353_03930 | | superoxide dismutase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS15730 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.48 | RALBFv3_RS05055 | | superoxide dismutase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.44 | H281DRAFT_00766 | | tRNA-U16,U17-dihydrouridine synthase | 0.45 | H281DRAFT_04108 | | superoxide dismutase, Fe-Mn family | — | — |
| Alteromonas macleodii MIT1002 | 0.44 | MIT1002_03387 | | putative tRNA-dihydrouridine synthase | 0.41 | MIT1002_01234 | | Superoxide dismutase [Fe] | — | — |
| Acinetobacter radioresistens SK82 | 0.44 | MPMX26_00482 | | tRNA-dihydrouridine(20/20a) synthase | 0.51 | MPMX26_00996 | | Superoxide dismutase [Fe] | low | > 36 |
| Ralstonia solanacearum GMI1000 | 0.44 | RS_RS06510 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.44 | RS_RS12665 | | superoxide dismutase | — | — |
| Variovorax sp. OAS795 | 0.43 | ABID97_RS13915 | | tRNA dihydrouridine(20/20a) synthase DusA | 0.45 | ABID97_RS16940 | | Fe-Mn family superoxide dismutase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.43 | RR42_RS12665 | | tRNA-dihydrouridine synthase A | 0.48 | RR42_RS03480 | | superoxide dismutase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF4791 | | tRNA dihydrouridine synthase A | 0.46 | GFF4512 | | Superoxide dismutase [Fe] (EC 1.15.1.1) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.41 | PfGW456L13_3987 | | tRNA dihydrouridine synthase A | 0.49 | PfGW456L13_1779 | | Superoxide dismutase [Fe] (EC 1.15.1.1) | — | — |
Not shown: 14 genomes with orthologs for Atu1515 only; 7 genomes with orthologs for Atu0876 only