| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2C3 | 1.0 | AO356_14785 | | ABC-ATPase UvrA | 1.0 | AO356_05425 | | ATP-dependent DNA helicase DinG | 0.84 | 3 |
| Pseudomonas fluorescens FW300-N2E2 | 1.00 | Pf6N2E2_4888 | | Excinuclease ABC subunit A | 1.00 | Pf6N2E2_2942 | | ATP-dependent helicase DinG/Rad3 | 0.66 | 6 |
| Pseudomonas sp. RS175 | 0.99 | PFR28_03974 | | UvrABC system protein A | 0.98 | PFR28_00520 | | ATP-dependent DNA helicase DinG | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.98 | Pf1N1B4_2611 | | Excinuclease ABC subunit A | 0.97 | Pf1N1B4_3194 | | ATP-dependent helicase DinG/Rad3 | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.97 | PfGW456L13_1283 | | Excinuclease ABC subunit A | 0.99 | PfGW456L13_4624 | | ATP-dependent helicase DinG/Rad3 | 0.34 | 26 |
| Pseudomonas fluorescens FW300-N2E3 | 0.97 | AO353_06855 | | ABC-ATPase UvrA | 0.99 | AO353_17020 | | ATP-dependent DNA helicase DinG | 0.72 | 3 |
| Pseudomonas simiae WCS417 | 0.97 | PS417_25395 | | excinuclease ABC subunit A | 0.99 | PS417_06510 | | ATP-dependent DNA helicase DinG | 0.43 | 12 |
| Pseudomonas fluorescens SBW25-INTG | 0.97 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.98 | PFLU_RS06540 | | ATP-dependent DNA helicase DinG | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.97 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.98 | PFLU_RS06540 | | ATP-dependent DNA helicase DinG | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.95 | Psyr_4520 | | Excinuclease ABC subunit A | 0.93 | Psyr_3856 | | Helicase c2 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.95 | Psyr_4520 | | Excinuclease ABC subunit A | 0.93 | Psyr_3856 | | Helicase c2 | 0.21 | 82 |
| Pseudomonas putida KT2440 | 0.93 | PP_0483 | | excinuclease (uvrABC system protein A) | 0.89 | PP_1125 | | putative Helicase | — | — |
| Pseudomonas sp. S08-1 | 0.92 | OH686_15495 | | excinuclease ABC subunit A | 0.89 | OH686_04830 | | ATP-dependent helicase DinG/Rad3 | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.90 | Psest_3576 | | excinuclease ABC, A subunit | 0.87 | Psest_2857 | | Rad3-related DNA helicases | 0.30 | 23 |
| Escherichia coli Nissle 1917 | 0.77 | ECOLIN_RS23485 | | excinuclease ABC subunit UvrA | 0.22 | ECOLIN_RS04255 | | ATP-dependent DNA helicase DinG | — | — |
| Escherichia fergusonii Becca | 0.77 | EFB2_04533 | | UvrABC system protein A | 0.22 | EFB2_03306 | | ATP-dependent DNA helicase DinG | 0.62 | 70 |
| Escherichia coli ECRC101 | 0.77 | MCAODC_03405 | uvrA | excinuclease ABC subunit UvrA | 0.22 | MCAODC_25495 | dinG | ATP-dependent DNA helicase DinG | low | > 87 |
| Escherichia coli ECOR38 | 0.77 | HEPCGN_11510 | uvrA | excinuclease ABC subunit UvrA | 0.22 | HEPCGN_01765 | dinG | ATP-dependent DNA helicase DinG | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.77 | GFF1429 | | Excinuclease ABC subunit A | 0.22 | GFF697 | | ATP-dependent helicase DinG/Rad3 | low | > 78 |
| Escherichia coli ECRC99 | 0.77 | KEDOAH_15255 | uvrA | excinuclease ABC subunit UvrA | 0.22 | KEDOAH_21630 | dinG | ATP-dependent DNA helicase DinG | — | — |
| Escherichia coli ECRC98 | 0.77 | JDDGAC_16530 | uvrA | excinuclease ABC subunit UvrA | 0.22 | JDDGAC_09915 | dinG | ATP-dependent DNA helicase DinG | low | > 86 |
| Rahnella sp. WP5 | 0.77 | EX31_RS11990 | | excinuclease ABC subunit UvrA | 0.21 | EX31_RS19020 | | ATP-dependent DNA helicase DinG | low | > 89 |
| Escherichia coli ECRC102 | 0.77 | NIAGMN_10740 | uvrA | excinuclease ABC subunit UvrA | 0.22 | NIAGMN_04325 | dinG | ATP-dependent DNA helicase DinG | — | — |
| Escherichia coli BW25113 | 0.77 | b4058 | uvrA | excinuclease ABC subunit A (NCBI) | 0.22 | b0799 | dinG | ATP-dependent DNA helicase (NCBI) | 0.24 | 34 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.77 | OHPLBJKB_03983 | | UvrABC system protein A | 0.22 | OHPLBJKB_02914 | | putative ATP-dependent helicase DinG | low | > 73 |
| Escherichia coli ECRC62 | 0.77 | BNILDI_06380 | uvrA | excinuclease ABC subunit UvrA | 0.22 | BNILDI_20910 | dinG | ATP-dependent DNA helicase DinG | 0.68 | 30 |
| Escherichia coli ECOR27 | 0.77 | NOLOHH_05145 | uvrA | excinuclease ABC subunit UvrA | 0.22 | NOLOHH_22630 | dinG | ATP-dependent DNA helicase DinG | low | > 75 |
| Escherichia coli ECRC100 | 0.77 | OKFHMN_12895 | uvrA | excinuclease ABC subunit UvrA | 0.22 | OKFHMN_06280 | dinG | ATP-dependent DNA helicase DinG | low | > 80 |
| Escherichia coli BL21 | 0.77 | ECD_03930 | | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC | 0.22 | ECD_00766 | | ATP-dependent DNA helicase | 0.47 | 56 |
| Dickeya dadantii 3937 | 0.77 | DDA3937_RS17605 | | excinuclease ABC subunit UvrA | 0.21 | DDA3937_RS08765 | | ATP-dependent DNA helicase DinG | low | > 74 |
| Dickeya dianthicola 67-19 | 0.77 | HGI48_RS17610 | | excinuclease ABC subunit UvrA | 0.21 | HGI48_RS08850 | | ATP-dependent DNA helicase DinG | low | > 71 |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS18735 | | excinuclease ABC subunit UvrA | 0.21 | DZA65_RS09155 | | ATP-dependent DNA helicase DinG | low | > 75 |
| Klebsiella michiganensis M5al | 0.77 | BWI76_RS01950 | | excinuclease ABC subunit A | 0.22 | BWI76_RS08920 | | ATP-dependent DNA helicase DinG | low | > 92 |
| Enterobacter sp. TBS_079 | 0.77 | MPMX20_00276 | | UvrABC system protein A | 0.22 | MPMX20_01426 | | ATP-dependent DNA helicase DinG | low | > 85 |
| Marinobacter adhaerens HP15 | 0.77 | HP15_406 | | excinuclease ABC, ATPase subunit (A) | 0.44 | HP15_1856 | | helicase c2 | 0.75 | 12 |
| Pectobacterium carotovorum WPP14 | 0.76 | HER17_RS03550 | | excinuclease ABC subunit UvrA | 0.22 | HER17_RS13230 | | ATP-dependent DNA helicase DinG | low | > 75 |
| Kangiella aquimarina DSM 16071 | 0.76 | B158DRAFT_0885 | | excinuclease ABC, A subunit | 0.16 | B158DRAFT_2492 | | Rad3-related DNA helicases | 0.54 | 26 |
| Alteromonas macleodii MIT1002 | 0.76 | MIT1002_00179 | | Excinuclease ABC subunit A | 0.15 | MIT1002_02593 | | putative ATP-dependent helicase DinG | low | > 70 |
| Enterobacter asburiae PDN3 | 0.76 | EX28DRAFT_4246 | | excinuclease ABC, A subunit | 0.22 | EX28DRAFT_2193 | | Rad3-related DNA helicases | low | > 76 |
| Serratia liquefaciens MT49 | 0.76 | IAI46_22905 | | excinuclease ABC subunit UvrA | 0.22 | IAI46_07445 | | ATP-dependent DNA helicase DinG | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.76 | CSW01_02080 | | UvrABC system protein A | 0.30 | CSW01_09290 | | ATP-dependent DNA helicase DinG | low | > 62 |
| Pantoea sp. MT58 | 0.76 | IAI47_17815 | | excinuclease ABC subunit UvrA | 0.20 | IAI47_13295 | | ATP-dependent DNA helicase DinG | low | > 76 |
| Shewanella amazonensis SB2B | 0.75 | Sama_0514 | | excinuclease ABC, A subunit (RefSeq) | 0.31 | Sama_1249 | dinG | ATP-dependent DNA helicase DinG (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.75 | SO4030 | uvrA | excinuclease ABC, A subunit (NCBI ptt file) | 0.33 | SO1819 | dinG | ATP-dependent helicase DinG (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.75 | Shewana3_3592 | | excinuclease ABC subunit A (RefSeq) | 0.34 | Shewana3_2630 | dinG | ATP-dependent DNA helicase DinG (RefSeq) | low | > 73 |
| Erwinia tracheiphila SCR3 | 0.75 | LU632_RS23685 | uvrA | excinuclease ABC subunit UvrA | 0.20 | LU632_RS09400 | dinG | ATP-dependent DNA helicase DinG | low | > 74 |
| Shewanella loihica PV-4 | 0.74 | Shew_0533 | | excinuclease ABC, A subunit (RefSeq) | 0.32 | Shew_2483 | dinG | ATP-dependent DNA helicase DinG (RefSeq) | 0.77 | 12 |
| Dechlorosoma suillum PS | 0.73 | Dsui_1622 | | excinuclease ABC, A subunit | 0.14 | Dsui_2149 | | DNA helicase, Rad3 | 0.73 | 16 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.72 | Xcc-8004.3830.1 | | Excinuclease ABC subunit A | 0.24 | Xcc-8004.5017.1 | | ATP-dependent helicase DinG/Rad3 | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.72 | ABZR86_RS00910 | | excinuclease ABC subunit UvrA | 0.29 | ABZR86_RS16845 | | ATP-dependent DNA helicase DinG | 0.67 | 28 |
| Rhodanobacter sp. FW510-T8 | 0.71 | OKGIIK_03980 | uvrA | excinuclease ABC subunit UvrA | 0.28 | OKGIIK_12870 | dinG | ATP-dependent DNA helicase DinG | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.71 | LRK54_RS15210 | | excinuclease ABC subunit UvrA | 0.29 | LRK54_RS11005 | | ATP-dependent DNA helicase DinG | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.71 | LRK55_RS14925 | | excinuclease ABC subunit UvrA | 0.29 | LRK55_RS10710 | | ATP-dependent DNA helicase DinG | low | > 63 |
| Herbaspirillum seropedicae SmR1 | 0.70 | HSERO_RS19810 | | excinuclease ABC subunit A | 0.14 | HSERO_RS14855 | | helicase | low | > 78 |
| Ralstonia solanacearum GMI1000 | 0.70 | RS_RS02080 | | excinuclease ABC subunit UvrA | 0.09 | RS_RS08195 | | ATP-dependent DNA helicase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.70 | RPSI07_RS22065 | | excinuclease ABC subunit UvrA | 0.09 | RPSI07_RS15960 | | ATP-dependent DNA helicase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.69 | H281DRAFT_01913 | | Excinuclease ABC subunit A | 0.14 | H281DRAFT_00533 | | ATP-dependent DNA helicase DinG | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS02145 | | excinuclease ABC subunit A | 0.15 | RR42_RS07580 | | helicase | 0.66 | 9 |
| Paraburkholderia graminis OAS925 | 0.69 | ABIE53_000732 | | excinuclease ABC subunit A | 0.09 | ABIE53_002724 | | ATP-dependent DNA helicase DinG | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.69 | QEN71_RS01825 | | excinuclease ABC subunit UvrA | 0.14 | QEN71_RS06060 | | ATP-dependent DNA helicase | low | > 153 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.66 | GFF2755 | | Excinuclease ABC subunit A | 0.27 | GFF2695 | | ATP-dependent helicase DinG/Rad3 | low | > 90 |
| Variovorax sp. OAS795 | 0.66 | ABID97_RS04340 | | excinuclease ABC subunit UvrA | 0.13 | ABID97_RS14180 | | ATP-dependent DNA helicase | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.65 | Ac3H11_4387 | | Excinuclease ABC subunit A | 0.27 | Ac3H11_4422 | | ATP-dependent helicase DinG/Rad3 | — | — |
| Caulobacter crescentus NA1000 | 0.60 | CCNA_02673 | | excinuclease ABC subunit A | 0.05 | CCNA_02118 | | ATP-dependent helicase, dinG family | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.60 | CCNA_02673 | | excinuclease ABC subunit A | 0.05 | CCNA_02118 | | ATP-dependent helicase, dinG family | low | > 67 |
| Mycobacterium tuberculosis H37Rv | 0.55 | Rv1638 | | Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA | 0.09 | Rv1329c | | Probable ATP-dependent helicase DinG | low | > 58 |
Not shown: 37 genomes with orthologs for AO356_14785 only; 0 genomes with orthologs for AO356_05425 only