| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E3 | 1.0 | AO353_10245 | | GDP-mannose 4,6-dehydratase | 1.0 | AO353_06350 | | hydrogenase | 0.29 | 17 |
| Pseudomonas fluorescens GW456-L13 | 0.94 | PfGW456L13_2338 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.92 | PfGW456L13_1385 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.84 | Pf1N1B4_2718 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_11835 | | GDP-mannose 4,6-dehydratase | 0.92 | AO356_15435 | | hydrogenase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.83 | Pf6N2E2_5024 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 103 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | 0.88 | PFR28_03843 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 88 |
| Pseudomonas sp. S08-1 | 0.83 | OH686_11980 | | GDP-mannose 4,6-dehydratase | 0.83 | OH686_09185 | | Hydroxymethylpyrimidine phosphate kinase ThiD | low | > 80 |
| Caulobacter crescentus NA1000 Δfur | 0.65 | CCNA_01062 | | GDP-mannose 4,6 dehydratase | 0.22 | CCNA_03331 | | phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase | — | — |
| Caulobacter crescentus NA1000 | 0.65 | CCNA_01062 | | GDP-mannose 4,6 dehydratase | 0.22 | CCNA_03331 | | phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase | — | — |
| Azospirillum brasilense Sp245 | 0.64 | AZOBR_RS33465 | | GDP-mannose 4 6-dehydratase | 0.21 | AZOBR_RS07045 | | phosphomethylpyrimidine kinase | — | — |
| Bosea sp. OAE506 | 0.62 | ABIE41_RS02910 | | GDP-mannose 4,6-dehydratase | 0.25 | ABIE41_RS21620 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.60 | A4249_RS12980 | | GDP-mannose 4,6-dehydratase | 0.22 | A4249_RS15985 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.59 | TX73_020470 | | GDP-mannose 4,6-dehydratase | 0.21 | TX73_020570 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS19840 | | GDP-mannose 4,6-dehydratase | 0.25 | RPSI07_RS23455 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Pseudomonas putida KT2440 | 0.57 | PP_1799 | | GDP-mannose 4,6-dehydratase | 0.87 | PP_4782 | | Phosphomethylpyrimidine kinase | low | > 96 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.57 | Xcc-8004.4503.1 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.23 | Xcc-8004.3091.1 | | hypothetical protein | low | > 74 |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | 0.86 | Psyr_4340 | | phosphomethylpyrimidine kinase, putative | low | > 86 |
| Rhodanobacter sp. FW510-T8 | 0.57 | OKGIIK_01210 | gmd | GDP-mannose 4,6-dehydratase | 0.21 | OKGIIK_03835 | | Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 52 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | 0.86 | Psyr_4340 | | phosphomethylpyrimidine kinase, putative | low | > 86 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS05705 | | GDP-mannose 4,6-dehydratase | 0.20 | ABID97_RS15330 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS09760 | | GDP-D-mannose dehydratase | 0.19 | BPHYT_RS12250 | | phosphomethylpyrimidine kinase | — | — |
| Paraburkholderia graminis OAS925 | 0.56 | ABIE53_002191 | | GDPmannose 4,6-dehydratase | 0.21 | ABIE53_001125 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_00954 | | GDPmannose 4,6-dehydratase | 0.21 | H281DRAFT_00587 | | hydroxymethylpyrimidine kinase /phosphomethylpyrimidine kinase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS21680 | | GDP-mannose 4,6-dehydratase | 0.20 | QEN71_RS06305 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.53 | CA264_05200 | | GDP-mannose 4,6-dehydratase | 0.20 | CA264_20430 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 74 |
| Dechlorosoma suillum PS | 0.52 | Dsui_0085 | | GDP-mannose 4,6-dehydratase | 0.39 | Dsui_0662 | | phosphomethylpyrimidine kinase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.52 | Rv1511 | | GDP-D-mannose dehydratase GmdA (GDP-mannose 4,6 dehydratase) (GMD) | 0.18 | Rv0422c | | Probable phosphomethylpyrimidine kinase ThiD (HMP-phosphate kinase) (HMP-P kinase) | — | — |
| Azospirillum sp. SherDot2 | 0.51 | MPMX19_06644 | | GDP-mannose 4,6-dehydratase | 0.20 | MPMX19_06182 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.51 | HMPREF1058_RS06615 | | GDP-mannose 4,6-dehydratase | 0.24 | HMPREF1058_RS06820 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 67 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.51 | CA265_RS19210 | | GDP-mannose 4,6-dehydratase | 0.19 | CA265_RS24160 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Phocaeicola dorei CL03T12C01 | 0.51 | ABI39_RS20410 | | GDP-mannose 4,6-dehydratase | 0.25 | ABI39_RS20615 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 72 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.51 | ABZR88_RS18375 | | GDP-mannose 4,6-dehydratase | 0.24 | ABZR88_RS08810 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.51 | HMPREF1078_RS00185 | | GDP-mannose 4,6-dehydratase | 0.22 | HMPREF1078_RS03470 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 61 |
| Dinoroseobacter shibae DFL-12 | 0.51 | Dshi_4139 | | GDP-mannose 4,6-dehydratase (RefSeq) | 0.18 | Dshi_0915 | | phosphomethylpyrimidine kinase (RefSeq) | low | > 64 |
| Synechococcus elongatus PCC 7942 | 0.51 | Synpcc7942_1342 | gmd | GDP-mannose 4,6-dehydratase | 0.16 | Synpcc7942_2379 | thiD | phosphomethylpyrimidine kinase | — | — |
| Castellaniella sp019104865 MT123 | 0.51 | ABCV34_RS12935 | | GDP-mannose 4,6-dehydratase | 0.20 | ABCV34_RS14505 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.51 | BT1224 | | GDP-mannose 4,6-dehydratase (NCBI ptt file) | 0.28 | BT0790 | | phosphomethylpyrimidine kinase (NCBI ptt file) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.50 | GFF1842 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.24 | GFF249 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 90 |
| Bacteroides ovatus ATCC 8483 | 0.50 | BACOVA_00511 | | GDP-mannose 4,6-dehydratase | 0.27 | BACOVA_02530 | | phosphomethylpyrimidine kinase | low | > 94 |
| Enterobacter sp. TBS_079 | 0.50 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | 0.23 | MPMX20_03076 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 85 |
| Bacteroides stercoris CC31F | 0.50 | HMPREF1181_RS12530 | | GDP-mannose 4,6-dehydratase | 0.23 | HMPREF1181_RS14705 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 56 |
| Cupriavidus basilensis FW507-4G11 | 0.50 | RR42_RS34465 | | GDP-mannose 4,6-dehydratase | 0.19 | RR42_RS01370 | | phosphomethylpyrimidine kinase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.50 | AMB_RS05505 | | GDP-mannose 4,6-dehydratase | 0.22 | AMB_RS16155 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | 0.95 | PFLU_RS26530 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | 0.95 | PFLU_RS26530 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.52 | 12 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.50 | Echvi_4398 | | GDP-mannose 4,6-dehydratase | 0.25 | Echvi_0215 | | phosphomethylpyrimidine kinase | low | > 79 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | 0.22 | EX28DRAFT_0469 | | hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.49 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.22 | GFF3834 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 78 |
| Rhodospirillum rubrum S1H | 0.49 | Rru_B0047 | | NAD-dependent epimerase/dehydratase (NCBI) | 0.26 | Rru_A1102 | | Phosphomethylpyrimidine kinase (NCBI) | — | — |
| Escherichia coli ECRC102 | 0.49 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | 0.24 | NIAGMN_22020 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Escherichia coli ECRC99 | 0.49 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | 0.24 | KEDOAH_04075 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Escherichia coli ECRC98 | 0.49 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | 0.24 | JDDGAC_28185 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Escherichia coli ECRC101 | 0.49 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | 0.24 | MCAODC_21085 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Escherichia coli ECRC100 | 0.49 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | 0.24 | OKFHMN_24075 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Escherichia coli ECRC62 | 0.49 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | 0.24 | BNILDI_14330 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 75 |
| Escherichia coli BL21 | 0.49 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | 0.24 | ECD_02031 | | hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase | low | > 61 |
| Escherichia coli ECOR27 | 0.49 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | 0.24 | NOLOHH_15415 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 75 |
| Escherichia coli BW25113 | 0.49 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | 0.24 | b2103 | thiD | phosphomethylpyrimidine kinase (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.49 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | 0.24 | EFB2_01754 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 86 |
| Escherichia coli ECOR38 | 0.49 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | 0.24 | HEPCGN_02760 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 87 |
| Agrobacterium fabrum C58 | 0.49 | Atu4789 | | GDP-mannose 4,6-dehydratase | 0.24 | Atu3290 | | phosphomethylpyrimidine kinase | low | > 89 |
| Dickeya dadantii 3937 | 0.49 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | 0.21 | DDA3937_RS15335 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | 0.25 | HER17_RS06265 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 75 |
| Escherichia coli Nissle 1917 | 0.49 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | 0.23 | ECOLIN_RS12335 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 0.23 | CSW01_06545 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 62 |
| Dickeya dianthicola ME23 | 0.48 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | 0.20 | DZA65_RS16235 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.48 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | 0.21 | HGI48_RS15410 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 71 |
| Phaeobacter inhibens DSM 17395 | 0.48 | PGA1_65p00310 | | GDP-mannose 4,6-dehydratase Gmd | 0.15 | PGA1_c09030 | | phosphomethylpyrimidine kinase ThiD | low | > 62 |
| Variovorax sp. SCN45 | 0.48 | GFF61 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | 0.16 | GFF2149 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | low | > 127 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_1818 | | GDP-mannose 4,6-dehydratase | 0.78 | Psest_0537 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | low | > 67 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.46 | DVU0448 | gmd | GDP-mannose 4,6-dehydratase (TIGR) | 0.18 | DVU0931 | thiD | phosphomethylpyrimidine kinase (TIGR) | — | — |
| Rahnella sp. WP5 | 0.35 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | 0.23 | EX31_RS20390 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | low | > 89 |
Not shown: 1 genomes with orthologs for AO353_10245 only; 22 genomes with orthologs for AO353_06350 only