Conservation of cofitness between AMB_RS21505 and AMB_RS18885 in Magnetospirillum magneticum AMB-1

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Magnetospirillum magneticum AMB-1 1.0 AMB_RS21505 DNA helicase RecQ 1.0 AMB_RS18885 hypothetical protein 0.67 13
Marinobacter adhaerens HP15 0.60 HP15_1718 ATP-dependent DNA helicase RecQ 0.61 HP15_843 PhnA protein low > 73
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.52 HSERO_RS13640 hypothetical protein low > 78
Azospirillum brasilense Sp245 0.58 AZOBR_RS02840 ATP-dependent DNA helicase RecQ 0.76 AZOBR_RS09590 putative Zn-ribbon-containing protein involved in phosphonate metabolism PhnA-like protein low > 97
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS18145 ATP-dependent DNA helicase RecQ 0.48 BPHYT_RS24510 alkylphosphonate utilization protein low > 109
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_02375 recQ DNA helicase RecQ 0.40 OKGIIK_04380 Phosphonoacetate hydrolase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.1476.1 ATP-dependent DNA helicase RecQ 0.45 Xcc-8004.3628.1 Alkylphosphonate utilization operon protein PhnA low > 74
Lysobacter sp. OAE881 0.57 ABIE51_RS05145 DNA helicase RecQ 0.45 ABIE51_RS11320 zinc ribbon domain-containing protein YjdM low > 62
Azospirillum sp. SherDot2 0.57 MPMX19_00123 ATP-dependent DNA helicase RecQ 0.74 MPMX19_01079 hypothetical protein low > 112
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS13000 DNA helicase RecQ 0.42 LRK54_RS15710 alkylphosphonate utilization protein low > 59
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS19310 ATP-dependent DNA helicase RecQ 0.44 RR42_RS12350 alkylphosphonate utilization protein low > 128
Rhodanobacter denitrificans MT42 0.57 LRK55_RS12700 DNA helicase RecQ 0.42 LRK55_RS15460 zinc ribbon domain-containing protein YjdM low > 63
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS19925 DNA helicase RecQ 0.44 ABZR86_RS00195 zinc ribbon domain-containing protein YjdM low > 74
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS02880 DNA helicase RecQ 0.52 ABZR87_RS12375 zinc ribbon domain-containing protein YjdM low > 80
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_06595 ATP-dependent DNA helicase RecQ 0.44 H281DRAFT_05381 phosphonoacetate hydrolase — —
Ralstonia solanacearum GMI1000 0.56 RS_RS15155 DNA helicase RecQ 0.60 RS_RS23785 hypothetical protein low > 80
Ralstonia solanacearum PSI07 0.56 RPSI07_RS10025 DNA helicase RecQ 0.59 RPSI07_RS06075 hypothetical protein low > 81
Ralstonia solanacearum UW163 0.55 UW163_RS06400 DNA helicase RecQ 0.60 UW163_RS21605 alkylphosphonate utilization protein — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS07220 DNA helicase RecQ 0.60 RALBFv3_RS17545 alkylphosphonate utilization protein low > 76
Rhizobium sp. OAE497 0.55 ABIE40_RS12745 DNA helicase RecQ 0.31 ABIE40_RS22120 alkylphosphonate utilization protein — —
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.61 PfGW456L13_1467 Alkylphosphonate utilization operon protein PhnA low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_3738 ATP-dependent DNA helicase RecQ 0.65 Psyr_0863 PhnA protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ 0.60 Pf6N2E2_5098 Alkylphosphonate utilization operon protein PhnA low > 103
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_3738 ATP-dependent DNA helicase RecQ 0.65 Psyr_0863 PhnA protein low > 86
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_04050 ATP-dependent DNA helicase RecQ 0.61 AO356_15790 alkylphosphonate utilization protein low > 104
Pseudomonas sp. RS175 0.55 PFR28_00788 ATP-dependent DNA helicase RecQ 0.58 PFR28_03774 hypothetical protein low > 88
Pseudomonas putida KT2440 0.55 PP_4516 ATP-dependent DNA 3 0.62 PP_0686 conserved protein of unknown function low > 96
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_18430 ATP-dependent DNA helicase RecQ 0.61 AO353_14090 alkylphosphonate utilization protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ 0.61 Pf1N1B4_2795 Alkylphosphonate utilization operon protein PhnA low > 87
Dechlorosoma suillum PS 0.54 Dsui_3092 ATP-dependent DNA helicase RecQ 0.41 Dsui_0559 alkylphosphonate utilization operon protein PhnA low > 51
Pseudomonas fluorescens SBW25 0.54 PFLU_RS21920 DNA helicase RecQ 0.61 PFLU_RS25385 alkylphosphonate utilization protein low > 109
Pseudomonas stutzeri RCH2 0.54 Psest_1869 ATP-dependent DNA helicase RecQ 0.59 Psest_0770 alkylphosphonate utilization operon protein PhnA low > 67
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS21920 DNA helicase RecQ 0.61 PFLU_RS25385 alkylphosphonate utilization protein low > 109
Pseudomonas sp. S08-1 0.54 OH686_20670 ATP-dependent DNA helicase RecQ 0.63 OH686_07235 Protein PhnA low > 80
Pseudomonas simiae WCS417 0.54 PS417_19950 ATP-dependent DNA helicase RecQ 0.62 PS417_23570 hypothetical protein low > 88
Agrobacterium fabrum C58 0.52 Atu0061 ATP-dependent DNA helicase 0.34 Atu6108 alkylphosphonate uptake protein low > 89
Acidovorax sp. GW101-3H11 0.50 Ac3H11_3308 ATP-dependent DNA helicase RecQ 0.45 Ac3H11_4421 Alkylphosphonate utilization operon protein PhnA — —
Serratia liquefaciens MT49 0.46 IAI46_00770 ATP-dependent DNA helicase RecQ 0.62 IAI46_06020 phnA family protein low > 86
Rhodospirillum rubrum S1H 0.46 Rru_A0089 ATP-dependent DNA helicase RecQ (NCBI) 0.71 Rru_A1476 PhnA protein (NCBI) low > 58
Enterobacter sp. TBS_079 0.44 MPMX20_04458 ATP-dependent DNA helicase RecQ 0.62 MPMX20_00327 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.44 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ 0.61 EX28DRAFT_4198 alkylphosphonate utilization operon protein PhnA low > 76
Pectobacterium carotovorum WPP14 0.44 HER17_RS01395 ATP-dependent DNA helicase RecQ 0.56 HER17_RS16190 alkylphosphonate utilization protein low > 75
Klebsiella michiganensis M5al 0.44 BWI76_RS01245 DNA helicase RecQ 0.61 BWI76_RS02240 alkylphosphonate utilization operon protein PhnA low > 92
Dickeya dianthicola 67-19 0.44 HGI48_RS20005 ATP-dependent DNA helicase RecQ 0.54 HGI48_RS05390 alkylphosphonate utilization protein low > 71
Rahnella sp. WP5 0.44 EX31_RS15210 ATP-dependent DNA helicase RecQ 0.54 EX31_RS19010 alkylphosphonate utilization protein low > 89
Shewanella loihica PV-4 0.44 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.56 Shew_1931 alkylphosphonate utilization operon protein PhnA (RefSeq) low > 60
Dickeya dianthicola ME23 0.43 DZA65_RS21045 ATP-dependent DNA helicase RecQ 0.54 DZA65_RS05690 alkylphosphonate utilization protein — —
Pantoea sp. MT58 0.43 IAI47_18360 ATP-dependent DNA helicase RecQ 0.51 IAI47_04280 alkylphosphonate utilization protein low > 76
Alteromonas macleodii MIT1002 0.43 MIT1002_00148 ATP-dependent DNA helicase RecQ 0.51 MIT1002_00555 putative alkylphosphonate utilization operon protein PhnA low > 70
Escherichia coli ECRC99 0.43 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ 0.62 KEDOAH_15560 yjdM Protein YjdM — —
Escherichia coli BW25113 0.43 b3822 recQ ATP-dependent DNA helicase (NCBI) 0.62 b4108 phnA hypothetical protein (NCBI) low > 76
Escherichia coli ECRC100 0.43 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ 0.62 OKFHMN_12605 yjdM Protein YjdM low > 80
Escherichia fergusonii Becca 0.43 EFB2_04815 ATP-dependent DNA helicase RecQ 0.62 EFB2_04475 hypothetical protein low > 86
Escherichia coli ECRC101 0.43 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ 0.62 MCAODC_03115 yjdM Protein YjdM low > 87
Escherichia coli ECOR38 0.43 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.62 HEPCGN_11240 yjdM Protein YjdM low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 0.62 OHPLBJKB_03937 hypothetical protein low > 73
Escherichia coli Nissle 1917 0.43 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ 0.62 ECOLIN_RS23775 zinc ribbon domain-containing protein YjdM low > 55
Escherichia coli ECOR27 0.43 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ 0.62 NOLOHH_04870 yjdM Protein YjdM low > 75
Escherichia coli ECRC62 0.43 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ 0.62 BNILDI_06620 yjdM Protein YjdM low > 75
Escherichia coli ECRC102 0.43 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ 0.62 NIAGMN_10450 yjdM Protein YjdM — —
Escherichia coli ECRC98 0.43 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ 0.62 JDDGAC_16240 yjdM Protein YjdM low > 86
Dickeya dadantii 3937 0.43 DDA3937_RS19850 ATP-dependent DNA helicase RecQ 0.55 DDA3937_RS05305 alkylphosphonate utilization protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF248 ATP-dependent DNA helicase RecQ 0.62 GFF1466 Alkylphosphonate utilization operon protein PhnA low > 78
Escherichia coli BL21 0.43 ECD_03701 ATP-dependent DNA helicase 0.62 ECD_03979 zinc-ribbon family protein low > 61
Erwinia tracheiphila SCR3 0.42 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ 0.55 LU632_RS22225 alkylphosphonate utilization protein low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS20865 DNA helicase RecQ 0.56 ABZR88_RS05120 zinc ribbon domain-containing protein YjdM low > 71
Bosea sp. OAE506 0.41 ABIE41_RS04160 DNA helicase RecQ 0.33 ABIE41_RS12485 alkylphosphonate utilization protein — —
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_2261 ATP-dependent DNA helicase RecQ 0.34 Ga0059261_1949 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_07560 DNA helicase RecQ 0.52 CA264_00900 phosphonoacetate hydrolase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_0784 ATP-dependent DNA helicase RecQ 0.56 Echvi_3330 alkylphosphonate utilization operon protein PhnA low > 79

Not shown: 26 genomes with orthologs for AMB_RS21505 only; 1 genomes with orthologs for AMB_RS18885 only