| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Brevundimonas sp. GW460-12-10-14-LB2 | 1.0 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | 1.0 | A4249_RS09680 | | transcriptional regulator GcvA | 0.99 | 7 |
| Azospirillum sp. SherDot2 | 0.60 | MPMX19_02807 | | L-threonine dehydratase biosynthetic IlvA | 0.40 | MPMX19_01055 | | Glycine cleavage system transcriptional activator | low | > 112 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | 0.30 | Psest_2739 | | Transcriptional regulator | low | > 67 |
| Castellaniella sp019104865 MT123 | 0.58 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | 0.27 | ABCV34_RS13115 | | LysR substrate-binding domain-containing protein | low | > 48 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | 0.29 | OH686_05585 | | Transcriptional regulator, LysR family | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.56 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.29 | Ac3H11_902 | | Glycine cleavage system transcriptional activator | — | — |
| Dechlorosoma suillum PS | 0.56 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | 0.29 | Dsui_2033 | | transcriptional regulator | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_08485 | | threonine dehydratase | 0.30 | AO353_15505 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.31 | PfGW456L13_4953 | | Glycine cleavage system transcriptional activator | low | > 87 |
| Marinobacter adhaerens HP15 | 0.55 | HP15_3213 | | threonine dehydratase biosynthetic | 0.29 | HP15_1669 | | transcriptional regulator, LysR family protein | low | > 73 |
| Pseudomonas putida KT2440 | 0.55 | PP_5149 | | threonine deaminase | 0.31 | PP_3143 | | Transcriptional regulator, LysR family | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.30 | PFLU_RS05140 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.30 | PFLU_RS05140 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.30 | Pf1N1B4_1012 | | Glycine cleavage system transcriptional activator | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.38 | Pf6N2E2_5208 | | Glycine cleavage system transcriptional activator GcvA | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_10330 | | threonine dehydratase | 0.31 | AO356_15125 | | LysR family transcriptional regulator | low | > 104 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF1379 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.30 | GFF1943 | | Glycine cleavage system transcriptional activator | — | — |
| Variovorax sp. SCN45 | 0.54 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.31 | GFF1355 | | Transcriptional regulator, LysR family | low | > 127 |
| Ralstonia solanacearum GMI1000 | 0.54 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | 0.37 | RS_RS19250 | | transcriptional regulator GcvA | — | — |
| Pseudomonas sp. RS175 | 0.54 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | 0.29 | PFR28_01476 | | Glycine cleavage system transcriptional activator | low | > 88 |
| Pseudomonas simiae WCS417 | 0.54 | PS417_27010 | | threonine dehydratase | 0.31 | PS417_05080 | | LysR family transcriptional regulator | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | 0.29 | Psyr_3521 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | 0.29 | Psyr_3521 | | transcriptional regulator, LysR family | low | > 86 |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | 0.30 | RPSI07_RS22555 | | transcriptional regulator GcvA | low | > 81 |
| Paraburkholderia sabiae LMG 24235 | 0.54 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | 0.37 | QEN71_RS36545 | | transcriptional regulator GcvA | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.54 | HSERO_RS19510 | | threonine dehydratase | 0.30 | HSERO_RS16765 | | LysR family transcriptional regulator | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.54 | ABIE53_002293 | | threonine dehydratase | 0.37 | ABIE53_004217 | | LysR family glycine cleavage system transcriptional activator | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS02315 | | threonine dehydratase | 0.30 | RR42_RS16490 | | transcriptional regulator | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.53 | BPHYT_RS03145 | | threonine dehydratase | 0.35 | BPHYT_RS11810 | | LysR family transcriptional regulator | — | — |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | 0.30 | ABZR87_RS01495 | | transcriptional regulator GcvA | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.53 | ABZR86_RS15925 | | threonine ammonia-lyase, biosynthetic | 0.38 | ABZR86_RS20860 | | transcriptional regulator GcvA | low | > 74 |
| Variovorax sp. OAS795 | 0.53 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | 0.32 | ABID97_RS06605 | | LysR substrate-binding domain-containing protein | low | > 91 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | 0.37 | DDA3937_RS05050 | | transcriptional regulator GcvA | low | > 74 |
| Shewanella amazonensis SB2B | 0.53 | Sama_3278 | | threonine dehydratase (RefSeq) | 0.37 | Sama_2429 | | DNA-binding transcriptional activator GcvA (RefSeq) | low | > 62 |
| Dickeya dianthicola 67-19 | 0.53 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | 0.38 | HGI48_RS05050 | | transcriptional regulator GcvA | low | > 71 |
| Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | 0.39 | RALBFv3_RS22095 | | transcriptional regulator GcvA | low | > 76 |
| Ralstonia solanacearum UW163 | 0.52 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | 0.39 | UW163_RS22635 | | transcriptional regulator GcvA | — | — |
| Shewanella oneidensis MR-1 | 0.52 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | 0.38 | SO1533 | | glycine cleavage system transcriptional activator, putative (NCBI ptt file) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.51 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | 0.38 | OHPLBJKB_00923 | | Glycine cleavage system transcriptional activator | low | > 73 |
| Escherichia coli ECRC100 | 0.51 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | 0.38 | OKFHMN_20120 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 80 |
| Escherichia coli ECRC99 | 0.51 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | 0.38 | KEDOAH_08010 | gcvA | glycine cleavage system transcriptional regulator GcvA | — | — |
| Escherichia coli ECRC102 | 0.51 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | 0.38 | NIAGMN_17890 | gcvA | glycine cleavage system transcriptional regulator GcvA | — | — |
| Escherichia coli BL21 | 0.51 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | 0.38 | ECD_02659 | | glycine cleavage system transcriptional activator; autorepressor | low | > 61 |
| Shewanella sp. ANA-3 | 0.51 | Shewana3_0359 | | threonine dehydratase (RefSeq) | 0.38 | Shewana3_2894 | | DNA-binding transcriptional activator GcvA (RefSeq) | — | — |
| Escherichia coli ECOR38 | 0.51 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | 0.38 | HEPCGN_19375 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 87 |
| Escherichia coli ECOR27 | 0.51 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | 0.38 | NOLOHH_12000 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 75 |
| Escherichia coli ECRC101 | 0.51 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | 0.38 | MCAODC_10645 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 87 |
| Escherichia coli ECRC98 | 0.51 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | 0.38 | JDDGAC_23785 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 86 |
| Escherichia coli BW25113 | 0.51 | b3772 | ilvA | threonine dehydratase (NCBI) | 0.38 | b2808 | gcvA | DNA-binding transcriptional dual regulator (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.51 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | 0.38 | BNILDI_10505 | gcvA | glycine cleavage system transcriptional regulator GcvA | low | > 75 |
| Klebsiella michiganensis M5al | 0.51 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | 0.39 | BWI76_RS22955 | | transcriptional regulator GcvA | low | > 92 |
| Escherichia coli Nissle 1917 | 0.51 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | 0.38 | ECOLIN_RS15650 | | glycine cleavage system transcriptional regulator GcvA | low | > 55 |
| Escherichia fergusonii Becca | 0.51 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | 0.38 | EFB2_01109 | | Glycine cleavage system transcriptional activator | low | > 86 |
| Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_13620 | ilvA | threonine ammonia-lyase, biosynthetic | 0.18 | OKGIIK_16180 | | Biotin transporter BioY | low | > 52 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | 0.39 | EX28DRAFT_2883 | | Transcriptional regulator | low | > 76 |
| Pantoea sp. MT58 | 0.50 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | 0.37 | IAI47_04025 | | transcriptional regulator GcvA | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.50 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | 0.37 | LU632_RS06255 | | transcriptional regulator GcvA | low | > 74 |
| Enterobacter sp. TBS_079 | 0.50 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | 0.39 | MPMX20_03671 | | Glycine cleavage system transcriptional activator | low | > 85 |
| Shewanella loihica PV-4 | 0.50 | Shew_0293 | | threonine dehydratase (RefSeq) | 0.36 | Shew_2764 | | DNA-binding transcriptional activator GcvA (RefSeq) | — | — |
| Serratia liquefaciens MT49 | 0.50 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | 0.36 | IAI46_20340 | | transcriptional regulator GcvA | low | > 86 |
| Dickeya dianthicola ME23 | 0.50 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | 0.38 | DZA65_RS05390 | | transcriptional regulator GcvA | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.38 | GFF4865 | | Glycine cleavage system transcriptional activator GcvA | low | > 78 |
| Vibrio cholerae E7946 ATCC 55056 | 0.49 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | 0.37 | CSW01_04590 | | transcriptional regulator GcvA | low | > 62 |
| Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | 0.36 | HER17_RS16415 | | transcriptional regulator GcvA | low | > 75 |
| Rahnella sp. WP5 | 0.49 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | 0.36 | EX31_RS13110 | | transcriptional regulator GcvA | low | > 89 |
| Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS10300 | | threonine ammonia-lyase, biosynthetic | 0.31 | LRK54_RS06630 | | transcriptional regulator GcvA | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS09940 | | threonine ammonia-lyase, biosynthetic | 0.31 | LRK55_RS06375 | | transcriptional regulator GcvA | low | > 63 |
| Alteromonas macleodii MIT1002 | 0.47 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | 0.34 | MIT1002_01520 | | Gcv operon activator | low | > 70 |
| Acinetobacter radioresistens SK82 | 0.45 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | 0.36 | MPMX26_01927 | | Glycine cleavage system transcriptional activator | — | — |
Not shown: 0 genomes with orthologs for A4249_RS00615 only; 17 genomes with orthologs for A4249_RS09680 only