Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Brevundimonas sp. GW460-12-10-14-LB2 | 1.0 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | 1.0 | A4249_RS07925 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.99 | 16 |
Azospirillum sp. SherDot2 | 0.60 | MPMX19_02807 | | L-threonine dehydratase biosynthetic IlvA | 0.54 | MPMX19_00635 | | 5,10-methylenetetrahydrofolate reductase | low | > 112 |
Pseudomonas stutzeri RCH2 | 0.58 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | 0.33 | Psest_0313 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.90 | 15 |
Castellaniella sp019104865 MT123 | 0.58 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | 0.33 | ABCV34_RS13550 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.78 | 15 |
Pseudomonas sp. S08-1 | 0.56 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | 0.34 | OH686_10820 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.81 | 19 |
Acidovorax sp. GW101-3H11 | 0.56 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.34 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.65 | 26 |
Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_08485 | | threonine dehydratase | 0.34 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | 0.62 | 38 |
Dechlorosoma suillum PS | 0.56 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | 0.35 | Dsui_0640 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.34 | PfGW456L13_1050 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.70 | 29 |
Marinobacter adhaerens HP15 | 0.55 | HP15_3213 | | threonine dehydratase biosynthetic | 0.36 | HP15_2917 | | 5,10-methylenetetrahydrofolate reductase-like protein | 0.97 | 2 |
Pseudomonas putida KT2440 | 0.55 | PP_5149 | | threonine deaminase | 0.33 | PP_4977 | | 5,10-methylenetetrahydrofolate reductase | 0.19 | 33 |
Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.34 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.34 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.34 | Pf6N2E2_4638 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 103 |
Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.34 | Pf1N1B4_2384 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.69 | 34 |
Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_10330 | | threonine dehydratase | 0.34 | AO356_13605 | | 5,10-methylenetetrahydrofolate reductase | 0.73 | 2 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF1379 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.32 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
Variovorax sp. SCN45 | 0.54 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.33 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 127 |
Ralstonia solanacearum GMI1000 | 0.54 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | 0.32 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Pseudomonas sp. RS175 | 0.54 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | 0.34 | PFR28_04202 | | 5,10-methylenetetrahydrofolate reductase | low | > 88 |
Pseudomonas simiae WCS417 | 0.54 | PS417_27010 | | threonine dehydratase | 0.33 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | 0.45 | 72 |
Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | 0.34 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | 0.34 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | 0.32 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.74 | 5 |
Paraburkholderia sabiae LMG 24235 | 0.54 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | 0.34 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.93 | 17 |
Paraburkholderia graminis OAS925 | 0.54 | ABIE53_002293 | | threonine dehydratase | 0.34 | ABIE53_000061 | | methylenetetrahydrofolate reductase (NADPH) | low | > 113 |
Herbaspirillum seropedicae SmR1 | 0.54 | HSERO_RS19510 | | threonine dehydratase | 0.30 | HSERO_RS21425 | | 5,10-methylenetetrahydrofolate reductase | low | > 78 |
Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS02315 | | threonine dehydratase | 0.34 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | low | > 128 |
Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | 0.33 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.75 | 38 |
Burkholderia phytofirmans PsJN | 0.53 | BPHYT_RS03145 | | threonine dehydratase | 0.33 | BPHYT_RS18705 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.53 | ABZR86_RS15925 | | threonine ammonia-lyase, biosynthetic | 0.36 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.76 | 39 |
Variovorax sp. OAS795 | 0.53 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | 0.32 | ABID97_RS25015 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.59 | 26 |
Dickeya dadantii 3937 | 0.53 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | 0.47 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | low | > 74 |
Dickeya dianthicola 67-19 | 0.53 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | 0.47 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | 0.65 | 57 |
Shewanella amazonensis SB2B | 0.53 | Sama_3278 | | threonine dehydratase (RefSeq) | 0.45 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.93 | 13 |
Ralstonia solanacearum UW163 | 0.52 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | 0.32 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | 0.32 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.57 | 4 |
Shewanella oneidensis MR-1 | 0.52 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | 0.46 | SO4054 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | 0.88 | 8 |
Escherichia coli ECRC101 | 0.51 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | 0.45 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | 0.97 | 9 |
Escherichia coli ECRC100 | 0.51 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | 0.45 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | 0.98 | 20 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.51 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | 0.45 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | low | > 73 |
Escherichia coli ECRC98 | 0.51 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | 0.45 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | 0.99 | 2 |
Escherichia coli BW25113 | 0.51 | b3772 | ilvA | threonine dehydratase (NCBI) | 0.45 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.94 | 14 |
Escherichia coli ECOR27 | 0.51 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | 0.45 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | 0.94 | 23 |
Escherichia coli BL21 | 0.51 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | 0.45 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | 0.95 | 4 |
Escherichia coli ECRC102 | 0.51 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | 0.45 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC62 | 0.51 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | 0.45 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | 0.98 | 7 |
Escherichia coli ECRC99 | 0.51 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | 0.45 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | — | — |
Shewanella sp. ANA-3 | 0.51 | Shewana3_0359 | | threonine dehydratase (RefSeq) | 0.46 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.87 | 7 |
Escherichia coli ECOR38 | 0.51 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | 0.45 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | 0.90 | 56 |
Klebsiella michiganensis M5al | 0.51 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | 0.46 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | 0.92 | 17 |
Escherichia coli Nissle 1917 | 0.51 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | 0.44 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | low | > 55 |
Escherichia fergusonii Becca | 0.51 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | 0.45 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_13620 | ilvA | threonine ammonia-lyase, biosynthetic | 0.35 | OKGIIK_11830 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 52 |
Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | 0.46 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 76 |
Erwinia tracheiphila SCR3 | 0.50 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | 0.45 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | low | > 74 |
Pantoea sp. MT58 | 0.50 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | 0.47 | IAI47_00890 | | methylenetetrahydrofolate reductase | low | > 76 |
Enterobacter sp. TBS_079 | 0.50 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | 0.46 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | 0.76 | 62 |
Shewanella loihica PV-4 | 0.50 | Shew_0293 | | threonine dehydratase (RefSeq) | 0.47 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.98 | 6 |
Serratia liquefaciens MT49 | 0.50 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | 0.46 | IAI46_24530 | | methylenetetrahydrofolate reductase | 0.42 | 23 |
Dickeya dianthicola ME23 | 0.50 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | 0.47 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | 0.77 | 46 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.45 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 78 |
Vibrio cholerae E7946 ATCC 55056 | 0.49 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | 0.43 | CSW01_13560 | | methylenetetrahydrofolate reductase | low | > 62 |
Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | 0.47 | HER17_RS00950 | | methylenetetrahydrofolate reductase | low | > 75 |
Rahnella sp. WP5 | 0.49 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | 0.46 | EX31_RS14205 | | methylenetetrahydrofolate reductase | 0.89 | 49 |
Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS10300 | | threonine ammonia-lyase, biosynthetic | 0.35 | LRK54_RS12030 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS09940 | | threonine ammonia-lyase, biosynthetic | 0.35 | LRK55_RS11765 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 63 |
Alteromonas macleodii MIT1002 | 0.47 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | 0.44 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | low | > 70 |
Acinetobacter radioresistens SK82 | 0.45 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | 0.29 | MPMX26_01002 | | 5,10-methylenetetrahydrofolate reductase | low | > 36 |
Not shown: 0 genomes with orthologs for A4249_RS00615 only; 31 genomes with orthologs for A4249_RS07925 only