Conservation of cofitness between Shewana3_1206 and Shewana3_1837 in Shewanella sp. ANA-3

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_1206 MscS mechanosensitive ion channel (RefSeq) 1.0 Shewana3_1837 alcohol dehydrogenase (RefSeq) 0.66 9
Shewanella oneidensis MR-1 0.97 SO3340 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) 0.99 SO2054 adhC alcohol dehydrogenase class III (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.85 Sama_2465 putative small-conductance mechanosensitive channel (RefSeq) 0.89 Sama_0004 alcohol dehydrogenase, zinc-binding (RefSeq) — —
Shewanella loihica PV-4 0.80 Shew_1152 MscS mechanosensitive ion channel (RefSeq) 0.91 Shew_1540 alcohol dehydrogenase (RefSeq) low > 60
Serratia liquefaciens MT49 0.48 IAI46_20995 small-conductance mechanosensitive channel MscS 0.87 IAI46_07885 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 86
Alteromonas macleodii MIT1002 0.48 MIT1002_03053 Small-conductance mechanosensitive channel 0.88 MIT1002_03089 S-(hydroxymethyl)glutathione dehydrogenase — —
Escherichia fergusonii Becca 0.46 EFB2_00982 Small-conductance mechanosensitive channel 0.70 EFB2_03694 S-(hydroxymethyl)glutathione dehydrogenase low > 86
Escherichia coli Nissle 1917 0.46 ECOLIN_RS16250 small-conductance mechanosensitive channel MscS 0.70 ECOLIN_RS02210 S-(hydroxymethyl)glutathione dehydrogenase low > 55
Escherichia coli ECRC102 0.46 NIAGMN_17170 mscS small-conductance mechanosensitive channel MscS 0.70 NIAGMN_06795 frmA S-(hydroxymethyl)glutathione dehydrogenase — —
Escherichia coli ECRC99 0.46 KEDOAH_08735 mscS small-conductance mechanosensitive channel MscS 0.70 KEDOAH_19230 frmA S-(hydroxymethyl)glutathione dehydrogenase — —
Escherichia coli ECOR27 0.46 NOLOHH_11315 mscS small-conductance mechanosensitive channel MscS 0.70 NOLOHH_01650 frmA S-(hydroxymethyl)glutathione dehydrogenase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00792 Small-conductance mechanosensitive channel 0.70 OHPLBJKB_03314 S-(hydroxymethyl)glutathione dehydrogenase low > 73
Escherichia coli BL21 0.46 ECD_02755 mechanosensitive channel protein, small conductance 0.70 ECD_00310 alcohol dehydrogenase class III; glutathione-dependent formaldehyde dehydrogenase low > 61
Escherichia coli ECRC62 0.46 BNILDI_09850 mscS small-conductance mechanosensitive channel MscS 0.70 BNILDI_23065 frmA S-(hydroxymethyl)glutathione dehydrogenase low > 75
Escherichia coli ECRC101 0.46 MCAODC_09925 mscS small-conductance mechanosensitive channel MscS 0.70 MCAODC_27970 frmA S-(hydroxymethyl)glutathione dehydrogenase low > 87
Escherichia coli ECRC100 0.46 OKFHMN_19405 mscS small-conductance mechanosensitive channel MscS 0.70 OKFHMN_08740 frmA S-(hydroxymethyl)glutathione dehydrogenase low > 80
Escherichia coli BW25113 0.46 b2924 mscS mechanosensitive channel (NCBI) 0.69 b0356 frmA alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase (NCBI) low > 76
Escherichia coli ECOR38 0.46 HEPCGN_18710 mscS small-conductance mechanosensitive channel MscS 0.70 HEPCGN_07365 frmA S-(hydroxymethyl)glutathione dehydrogenase low > 87
Escherichia coli ECRC98 0.46 JDDGAC_23035 mscS small-conductance mechanosensitive channel MscS 0.70 JDDGAC_12395 frmA S-(hydroxymethyl)glutathione dehydrogenase low > 86
Klebsiella michiganensis M5al 0.46 BWI76_RS23970 mechanosensitive ion channel protein MscS 0.78 BWI76_RS13260 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 92
Rahnella sp. WP5 0.46 EX31_RS21435 small-conductance mechanosensitive channel MscS 0.86 EX31_RS18715 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 89
Erwinia tracheiphila SCR3 0.44 LU632_RS05550 mscS small-conductance mechanosensitive channel MscS 0.86 LU632_RS17270 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3019 Protein involved in stability of MscS mechanosensitive channel 0.74 GFF2617 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.28 28
Pectobacterium carotovorum WPP14 0.43 HER17_RS02700 small-conductance mechanosensitive channel MscS 0.85 HER17_RS12790 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 75
Dickeya dadantii 3937 0.43 DDA3937_RS18505 small-conductance mechanosensitive channel MscS 0.84 DDA3937_RS09325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 74
Pantoea sp. MT58 0.42 IAI47_03700 small-conductance mechanosensitive channel MscS 0.86 IAI47_06705 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 76
Enterobacter asburiae PDN3 0.42 EX28DRAFT_2970 Small-conductance mechanosensitive channel 0.78 EX28DRAFT_1257 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 76
Dickeya dianthicola ME23 0.42 DZA65_RS19565 small-conductance mechanosensitive channel MscS 0.84 DZA65_RS09655 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 75
Dickeya dianthicola 67-19 0.42 HGI48_RS18430 small-conductance mechanosensitive channel MscS 0.84 HGI48_RS09350 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 71
Enterobacter sp. TBS_079 0.42 MPMX20_03776 Small-conductance mechanosensitive channel 0.78 MPMX20_02209 S-(hydroxymethyl)glutathione dehydrogenase low > 85
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_2270 Small-conductance mechanosensitive channel 0.87 B158DRAFT_0940 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 40
Pseudomonas stutzeri RCH2 0.42 Psest_1143 Small-conductance mechanosensitive channel 0.80 Psest_2816 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 67
Pseudomonas sp. RS175 0.40 PFR28_03424 Small-conductance mechanosensitive channel 0.80 PFR28_00420 S-(hydroxymethyl)glutathione dehydrogenase low > 88
Marinobacter adhaerens HP15 0.39 HP15_3381 MscS mechanosensitive ion channel 0.77 HP15_4017 formaldehyde dehydrogenase (glutathione-dependent) low > 73
Pseudomonas simiae WCS417 0.39 PS417_22505 mechanosensitive ion channel protein MscS 0.80 PS417_06330 S-(hydroxymethyl)glutathione dehydrogenase low > 88
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS24145 mechanosensitive ion channel 0.80 PFLU_RS06395 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS24145 mechanosensitive ion channel 0.80 PFLU_RS06395 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_17965 mechanosensitive ion channel protein MscS 0.80 AO356_05920 S-(hydroxymethyl)glutathione dehydrogenase low > 104
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_649 Small-conductance mechanosensitive channel 0.80 Pf1N1B4_3108 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) low > 87
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5523 Small-conductance mechanosensitive channel 0.80 Pf6N2E2_3044 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) low > 103
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS12290 mechanosensitive ion channel domain-containing protein 0.77 ABZR86_RS17285 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS04125 mechanosensitive ion channel family protein 0.60 A4249_RS00420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 48
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_03635 mechanosensitive ion channel protein MscS 0.80 AO353_16580 S-(hydroxymethyl)glutathione dehydrogenase low > 101
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS37450 mechanosensitive ion channel protein MscS 0.66 RR42_RS25775 alcohol dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.34 PGA1_c07080 small-conductance mechanosensitive channel 0.62 PGA1_c02510 S-(hydroxymethyl)glutathione dehydrogenase FrmA low > 62
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1841 Small-conductance mechanosensitive channel 0.82 PfGW456L13_3630 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) low > 87
Castellaniella sp019104865 MT123 0.32 ABCV34_RS00345 mechanosensitive ion channel family protein 0.69 ABCV34_RS09045 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 48
Pseudomonas putida KT2440 0.31 PP_1353 conserved membrane protein of unknown function 0.81 PP_1616 formaldehyde dehydrogenase, glutathione-dependent low > 96
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_12610 Small-conductance mechanosensitive channel 0.79 OKGIIK_16185 frmA S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 52
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_4086 MscS Mechanosensitive ion channel 0.79 Psyr_1367 Zinc-containing alcohol dehydrogenase superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_4086 MscS Mechanosensitive ion channel 0.79 Psyr_1367 Zinc-containing alcohol dehydrogenase superfamily low > 86
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS11275 mechanosensitive ion channel 0.78 LRK54_RS09935 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 59
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03727 small-conductance mechanosensitive channel mcsS 0.61 CCNA_02601 glutathione-dependent formaldehyde dehydrogenase low > 67
Caulobacter crescentus NA1000 0.30 CCNA_03727 small-conductance mechanosensitive channel mcsS 0.61 CCNA_02601 glutathione-dependent formaldehyde dehydrogenase low > 66
Rhodanobacter denitrificans MT42 0.29 LRK55_RS10980 mechanosensitive ion channel 0.78 LRK55_RS09575 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 63
Pseudomonas sp. S08-1 0.28 OH686_08205 Small-conductance mechanosensitive channel 0.81 OH686_18150 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 80
Ralstonia solanacearum UW163 0.27 UW163_RS08150 mechanosensitive ion channel family protein 0.67 UW163_RS01260 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS05475 mechanosensitive ion channel family protein 0.67 RALBFv3_RS12345 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 76
Rhizobium sp. OAE497 0.27 ABIE40_RS06130 mechanosensitive ion channel domain-containing protein 0.60 ABIE40_RS09860 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 107
Ralstonia solanacearum GMI1000 0.27 RS_RS13330 mechanosensitive ion channel family protein 0.67 RS_RS03030 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.26 RPSI07_RS11830 mechanosensitive ion channel family protein 0.67 RPSI07_RS20965 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 81
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS01115 mechanosensitive ion channel family protein 0.66 ABZR87_RS08285 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.35 4
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS17760 mechanosensitive ion channel protein MscS 0.65 HSERO_RS13615 alcohol dehydrogenase low > 78
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS06305 small mechanosensitive ion channel protein MscS 0.75 BPHYT_RS00510 S-(hydroxymethyl)glutathione dehydrogenase low > 109
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS26425 mechanosensitive ion channel family protein 0.65 QEN71_RS02555 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase low > 153
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS08750 Ion channel protein 0.14 CA265_RS12005 glutathione-dependent formaldehyde dehydrogenase low > 88
Agrobacterium fabrum C58 0.22 Atu1050 hypothetical protein 0.60 Atu1670 alcohol dehydrogenase class III low > 89
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_04714 small conductance mechanosensitive channel 0.65 H281DRAFT_04166 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase low > 103

Not shown: 11 genomes with orthologs for Shewana3_1206 only; 20 genomes with orthologs for Shewana3_1837 only