| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Shewanella amazonensis SB2B | 1.0 | Sama_0337 | | isopropylmalate isomerase large subunit (RefSeq) | 1.0 | Sama_3278 | | threonine dehydratase (RefSeq) | 0.94 | 20 |
| Shewanella sp. ANA-3 | 0.86 | Shewana3_3759 | | isopropylmalate isomerase large subunit (RefSeq) | 0.77 | Shewana3_0359 | | threonine dehydratase (RefSeq) | 0.87 | 63 |
| Shewanella loihica PV-4 | 0.86 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | 0.75 | Shew_0293 | | threonine dehydratase (RefSeq) | 0.98 | 14 |
| Shewanella oneidensis MR-1 | 0.85 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | 0.78 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | 0.87 | 68 |
| Escherichia fergusonii Becca | 0.73 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | 0.56 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | 0.55 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | low | > 73 |
| Escherichia coli ECOR38 | 0.73 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | 0.94 | 50 |
| Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | 0.56 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | low | > 55 |
| Escherichia coli BL21 | 0.73 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | 0.55 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | 0.93 | 19 |
| Escherichia coli ECRC62 | 0.73 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | 0.98 | 24 |
| Escherichia coli BW25113 | 0.73 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | 0.55 | b3772 | ilvA | threonine dehydratase (NCBI) | 0.97 | 7 |
| Escherichia coli ECOR27 | 0.73 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | 0.93 | 35 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | 0.97 | 12 |
| Escherichia coli ECRC100 | 0.72 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | 0.97 | 26 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia coli ECRC101 | 0.72 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | 0.96 | 14 |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Klebsiella michiganensis M5al | 0.72 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | 0.55 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | 0.95 | 4 |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | 0.55 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | 0.96 | 5 |
| Pantoea sp. MT58 | 0.72 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | 0.56 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | 0.98 | 12 |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | 0.55 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | 0.95 | 4 |
| Rahnella sp. WP5 | 0.72 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.56 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | 0.93 | 53 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.72 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.55 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 78 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | 0.58 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | 0.75 | 17 |
| Serratia liquefaciens MT49 | 0.71 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | 0.56 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | 0.61 | 48 |
| Vibrio cholerae E7946 ATCC 55056 | 0.70 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | 0.57 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | low | > 62 |
| Dickeya dianthicola ME23 | 0.70 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.56 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | 0.84 | 12 |
| Dickeya dianthicola 67-19 | 0.70 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | 0.58 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.70 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | 0.56 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | 0.95 | 35 |
| Erwinia tracheiphila SCR3 | 0.68 | LU632_RS02870 | leuC | 3-isopropylmalate dehydratase large subunit | 0.56 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | 0.66 | 50 |
| Alteromonas macleodii MIT1002 | 0.66 | MIT1002_00947 | | 3-isopropylmalate dehydratase large subunit | 0.54 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | 0.98 | 24 |
| Azospirillum sp. SherDot2 | 0.64 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | 0.49 | MPMX19_02807 | | L-threonine dehydratase biosynthetic IlvA | low | > 112 |
| Castellaniella sp019104865 MT123 | 0.61 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | 0.49 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | 0.64 | 5 |
| Cupriavidus basilensis FW507-4G11 | 0.60 | RR42_RS14400 | | isopropylmalate isomerase | 0.47 | RR42_RS02315 | | threonine dehydratase | low | > 128 |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.52 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.80 | 35 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.53 | Psyr_1672 | | L-threonine ammonia-lyase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.53 | Psyr_1672 | | L-threonine ammonia-lyase | low | > 86 |
| Pseudomonas sp. RS175 | 0.60 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | 0.52 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | 0.42 | 35 |
| Pseudomonas putida KT2440 | 0.60 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.52 | PP_5149 | | threonine deaminase | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.59 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | 0.53 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | 0.92 | 5 |
| Herbaspirillum seropedicae SmR1 | 0.59 | HSERO_RS16515 | | isopropylmalate isomerase | 0.47 | HSERO_RS19510 | | threonine dehydratase | 0.94 | 9 |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.52 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.76 | 56 |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_20620 | | isopropylmalate isomerase | 0.51 | AO353_08485 | | threonine dehydratase | 0.72 | 48 |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_21400 | | isopropylmalate isomerase | 0.52 | AO356_10330 | | threonine dehydratase | 0.73 | 44 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.47 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | 0.91 | 3 |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.52 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.47 | 56 |
| Ralstonia solanacearum GMI1000 | 0.59 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | 0.49 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | — | — |
| Pseudomonas simiae WCS417 | 0.59 | PS417_18600 | | isopropylmalate isomerase | 0.52 | PS417_27010 | | threonine dehydratase | 0.73 | 35 |
| Paraburkholderia sabiae LMG 24235 | 0.59 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | 0.48 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | 0.85 | 12 |
| Marinobacter adhaerens HP15 | 0.59 | HP15_1834 | | protein containing 3-isopropylmalate dehydratase, large subunit region domain | 0.54 | HP15_3213 | | threonine dehydratase biosynthetic | 0.95 | 3 |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | 0.46 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | 0.46 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.52 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.52 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.59 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.49 | GFF1379 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.85 | 6 |
| Burkholderia phytofirmans PsJN | 0.59 | BPHYT_RS33915 | | isopropylmalate isomerase | 0.48 | BPHYT_RS11065 | | threonine dehydratase | — | — |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | 0.48 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | 0.81 | 4 |
| Pseudomonas sp. S08-1 | 0.59 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | 0.53 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | 0.87 | 9 |
| Acinetobacter radioresistens SK82 | 0.58 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | 0.47 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | 0.96 | 7 |
| Paraburkholderia graminis OAS925 | 0.58 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | 0.48 | ABIE53_002293 | | threonine dehydratase | low | > 113 |
| Acidovorax sp. GW101-3H11 | 0.58 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.49 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.63 | 57 |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | 0.47 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | — | — |
| Variovorax sp. SCN45 | 0.58 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.47 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 127 |
| Dechlorosoma suillum PS | 0.58 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | 0.49 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS07375 | | 3-isopropylmalate dehydratase large subunit | 0.43 | LRK54_RS10300 | | threonine ammonia-lyase, biosynthetic | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS07105 | | 3-isopropylmalate dehydratase large subunit | 0.43 | LRK55_RS09940 | | threonine ammonia-lyase, biosynthetic | low | > 63 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.51 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | 0.48 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | 0.99 | 25 |
| Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS15960 | | 3-isopropylmalate dehydratase large subunit | 0.46 | ABZR86_RS15925 | | threonine ammonia-lyase, biosynthetic | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_13585 | leuC | 3-isopropylmalate dehydratase large subunit | 0.44 | OKGIIK_13620 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 52 |
Not shown: 34 genomes with orthologs for Sama_0337 only; 0 genomes with orthologs for Sama_3278 only