Conservation of cofitness between Sama_2218 and Sama_1064 in Shewanella amazonensis SB2B

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2218 maleylacetoacetate isomerase (RefSeq) 1.0 Sama_1064 phosphoribosylaminoimidazole carboxylase (RefSeq) 0.39 8
Shewanella sp. ANA-3 0.68 Shewana3_2777 maleylacetoacetate isomerase (RefSeq) 0.86 Shewana3_3155 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.68 SO1671 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.85 SO3554 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.64 Shew_1439 maleylacetoacetate isomerase (RefSeq) 0.60 Shew_1248 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Acinetobacter radioresistens SK82 0.57 MPMX26_02378 Maleylpyruvate isomerase 0.54 MPMX26_03051 N5-carboxyaminoimidazole ribonucleotide mutase low > 36
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS05735 maleylacetoacetate isomerase 0.62 LRK54_RS13810 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodanobacter denitrificans MT42 0.56 LRK55_RS05490 maleylacetoacetate isomerase 0.62 LRK55_RS13525 5-(carboxyamino)imidazole ribonucleotide mutase
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS18680 maleylacetoacetate isomerase 0.60 ABZR86_RS09835 5-(carboxyamino)imidazole ribonucleotide mutase
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS01655 maleylacetoacetate isomerase 0.40 QEN71_RS02445 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas stutzeri RCH2 0.54 Psest_3511 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.60 Psest_4069 phosphoribosylaminoimidazole carboxylase, PurE protein
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1449 maleylacetoacetate isomerase 0.57 B158DRAFT_0611 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_01115 maiA maleylacetoacetate isomerase 0.58 OKGIIK_03045 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Lysobacter sp. OAE881 0.54 ABIE51_RS04250 maleylacetoacetate isomerase 0.49 ABIE51_RS15395 5-(carboxyamino)imidazole ribonucleotide mutase
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS01970 maleylacetoacetate isomerase 0.36 RR42_RS03225 N5-carboxyaminoimidazole ribonucleotide mutase
Castellaniella sp019104865 MT123 0.52 ABCV34_RS13685 maleylacetoacetate isomerase 0.38 ABCV34_RS00560 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas sp. S08-1 0.52 OH686_21095 maleylacetoacetate isomerase 0.65 OH686_13375 N5-carboxyaminoimidazole ribonucleotide mutase
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_01970 maleylacetoacetate isomerase (EC 5.2.1.2) 0.41 H281DRAFT_04186 5-(carboxyamino)imidazole ribonucleotide mutase
Alteromonas macleodii MIT1002 0.52 MIT1002_01149 Maleylpyruvate isomerase 0.49 MIT1002_00521 N5-carboxyaminoimidazole ribonucleotide mutase low > 70
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_06790 maleylacetoacetate isomerase 0.60 CSW01_00265 5-(carboxyamino)imidazole ribonucleotide mutase low > 62
Paraburkholderia graminis OAS925 0.52 ABIE53_000699 maleylpyruvate isomerase 0.42 ABIE53_003424 5-(carboxyamino)imidazole ribonucleotide mutase
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS02805 maleylacetoacetate isomerase 0.40 BPHYT_RS16250 N5-carboxyaminoimidazole ribonucleotide mutase low > 109
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS06920 maleylacetoacetate isomerase 0.41 ABZR87_RS08085 5-(carboxyamino)imidazole ribonucleotide mutase
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS05615 maleylacetoacetate isomerase 0.45 HSERO_RS03365 N5-carboxyaminoimidazole ribonucleotide mutase
Ralstonia solanacearum PSI07 0.49 RPSI07_RS22255 maleylacetoacetate isomerase 0.43 RPSI07_RS21135 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum UW163 0.49 UW163_RS02530 maleylacetoacetate isomerase 0.44 UW163_RS01415 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS11050 maleylacetoacetate isomerase 0.44 RALBFv3_RS12195 5-(carboxyamino)imidazole ribonucleotide mutase
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_0507 maleylacetoacetate isomerase 0.58 Ga0059261_1427 phosphoribosylaminoimidazole carboxylase, PurE protein
Ralstonia solanacearum GMI1000 0.48 RS_RS01895 maleylacetoacetate isomerase 0.44 RS_RS02880 5-(carboxyamino)imidazole ribonucleotide mutase
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS12095 maleylacetoacetate isomerase 0.63 A4249_RS08940 5-(carboxyamino)imidazole ribonucleotide mutase
Azospirillum sp. SherDot2 0.46 MPMX19_02062 Maleylpyruvate isomerase 0.57 MPMX19_01417 N5-carboxyaminoimidazole ribonucleotide mutase
Variovorax sp. OAS795 0.46 ABID97_RS12400 maleylacetoacetate isomerase 0.42 ABID97_RS01705 5-(carboxyamino)imidazole ribonucleotide mutase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF4799 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.36 GFF2771 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Escherichia coli ECRC102 0.44 NIAGMN_21370 maiA maleylacetoacetate isomerase 0.60 NIAGMN_05890 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC98 0.44 JDDGAC_27560 maiA maleylacetoacetate isomerase 0.60 JDDGAC_11485 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 86
Escherichia coli ECRC100 0.44 OKFHMN_23605 maiA maleylacetoacetate isomerase 0.60 OKFHMN_07835 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 80
Escherichia coli ECRC99 0.44 KEDOAH_04580 maiA maleylacetoacetate isomerase 0.60 KEDOAH_20135 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC101 0.44 MCAODC_14655 maiA maleylacetoacetate isomerase 0.60 MCAODC_27055 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 87
Escherichia coli ECRC62 0.44 BNILDI_14095 maiA maleylacetoacetate isomerase 0.60 BNILDI_22255 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF3802 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.60 GFF4439 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) low > 78
Klebsiella michiganensis M5al 0.44 BWI76_RS19575 maleylacetoacetate isomerase 0.60 BWI76_RS07070 5-(carboxyamino)imidazole ribonucleotide mutase low > 92
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.4525.1 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.48 Xcc-8004.2011.1 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) low > 74
Pseudomonas putida KT2440 0.42 PP_4619 Maleylacetoacetate isomerase 0.61 PP_5336 N5-carboxyaminoimidazole ribonucleotide mutase
Rhodopseudomonas palustris CGA009 0.41 TX73_024280 maleylacetoacetate isomerase 0.49 TX73_021640 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_5292 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.54 Pf6N2E2_4082 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4960 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.62 PfGW456L13_746 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1023 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.62 Pf1N1B4_2027 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Caulobacter crescentus NA1000 0.39 CCNA_03683 maleylpyruvate isomerase 0.63 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_16835 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.62 AO356_11080 N5-carboxyaminoimidazole ribonucleotide mutase
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_03683 maleylpyruvate isomerase 0.63 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit low > 67
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_15560 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.63 AO353_09940 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas sp. RS175 0.39 PFR28_00223 Maleylpyruvate isomerase 0.62 PFR28_04496 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens SBW25 0.38 PFLU_RS05095 maleylacetoacetate isomerase 0.62 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS05095 maleylacetoacetate isomerase 0.62 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas simiae WCS417 0.38 PS417_05025 maleylacetoacetate isomerase 0.63 PS417_28120 N5-carboxyaminoimidazole ribonucleotide mutase
Phaeobacter inhibens DSM 17395 0.38 PGA1_c00380 putative maleylacetoacetate isomerase 0.53 PGA1_c24860 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE low > 62
Sinorhizobium meliloti 1021 0.37 SMc03206 maleylacetoacetate isomerase (glutathione transferase zeta 1) protein 0.53 SMc04001 phosphoribosylaminoimidazole carboxylase catalytic subunit protein low > 103

Not shown: 2 genomes with orthologs for Sama_2218 only; 45 genomes with orthologs for Sama_1064 only