Conservation of cofitness between Shew_2573 and Shew_3759 in Shewanella loihica PV-4

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2573 carbamoyl-phosphate synthase L chain, ATP-binding (RefSeq) 1.0 Shew_3759 imidazolonepropionase (RefSeq) 0.57 15
Shewanella sp. ANA-3 0.77 Shewana3_1669 3-methylcrotonoyl-CoA carboxylase, alpha subunit (RefSeq) 0.90 Shewana3_0098 imidazolonepropionase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.76 SO1894 acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file) 0.89 SO0095 hutI Imidazolonepropionase (EC 3.5.2.7) (from data) low > 76
Shewanella amazonensis SB2B 0.69 Sama_1359 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.84 Sama_0080 imidazolonepropionase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.50 MIT1002_01666 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.49 MIT1002_00902 Imidazolonepropionase low > 70
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2507 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.54 B158DRAFT_1437 imidazolonepropionase (EC 3.5.2.7)
Azospirillum brasilense Sp245 0.46 AZOBR_RS22285 3-methylcrotonyl-CoA carboxylase subunit alpha 0.53 AZOBR_RS21725 imidazolonepropionase
Azospirillum sp. SherDot2 0.46 MPMX19_03940 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.59 MPMX19_04938 Imidazolonepropionase low > 112
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.49 Psyr_4835 imidazolonepropionase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.49 Psyr_4835 imidazolonepropionase low > 86
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS06260 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.54 ABZR87_RS01015 imidazolonepropionase low > 80
Ralstonia solanacearum UW163 0.44 UW163_RS03120 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.53 UW163_RS08245 imidazolonepropionase
Ralstonia solanacearum PSI07 0.44 RPSI07_RS22860 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.54 RPSI07_RS11925 imidazolonepropionase low > 81
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS10460 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.53 RALBFv3_RS05380 imidazolonepropionase low > 76
Ralstonia solanacearum GMI1000 0.44 RS_RS01300 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.53 RS_RS13240 imidazolonepropionase low > 80
Pseudomonas putida KT2440 0.44 PP_4067 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha 0.50 PP_5030 Imidazolonepropionase low > 96
Pseudomonas sp. SVBP6 0.44 COO64_RS24740 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.51 COO64_RS13425 hutI imidazolonepropionase low > 93
Pseudomonas sp. BP01 0.44 JOY50_RS06805 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.51 JOY50_RS09535 hutI imidazolonepropionase low > 84
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS26895 3-methylcrotonyl-CoA carboxylase 0.52 RR42_RS16905 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 128
Pseudomonas aeruginosa PA14 0.43 IKLFDK_09835 methylcrotonyl-CoA carboxylase subunit alpha 0.50 IKLFDK_28060 imidazolonepropionase low > 101
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3984 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.50 Pf1N1B4_1579 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 87
Agrobacterium fabrum C58 0.43 Atu3479 3-methylcrotonyl-CoA carboxylase subunit alpha 0.48 Atu3934 imidazolonepropionase low > 89
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_2588 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.50 PfGW456L13_317 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 87
Pseudomonas sp. RS175 0.43 PFR28_01257 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.50 PFR28_04972 Imidazolonepropionase low > 88
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_2194 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.51 Pf6N2E2_3798 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 103
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS12855 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.52 QEN71_RS23495 imidazolonepropionase low > 153
Pseudomonas simiae WCS417 0.43 PS417_17030 3-methylcrotonyl-CoA carboxylase 0.51 PS417_01760 imidazolonepropionase
Pseudomonas sp. DMC3 0.43 GFF1471 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.50 GFF3061 Imidazolonepropionase low > 89
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_01595 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.51 AO356_09595 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.31 26
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.318.1 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.46 Xcc-8004.3295.1 Imidazolonepropionase (EC 3.5.2.7) low > 74
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_20335 3-methylcrotonyl-CoA carboxylase 0.50 AO353_12280 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 101
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3016 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.49 Ac3H11_2550 Imidazolonepropionase (EC 3.5.2.7) (from data)
Rhodanobacter sp000427505 FW510-R12 0.42 LRK53_RS07685 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.49 LRK53_RS12565 imidazolonepropionase low > 60
Lysobacter sp. OAE881 0.42 ABIE51_RS13200 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.48 ABIE51_RS06250 imidazolonepropionase low > 62
Pseudomonas sp. S08-1 0.42 OH686_00840 Methylcrotonyl-CoA carboxylase biotin-containing subunit 0.49 OH686_16735 imidazolonepropionase low > 80
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.51 PFLU_RS01815 imidazolonepropionase low > 109
Pseudomonas fluorescens SBW25 0.42 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.51 PFLU_RS01815 imidazolonepropionase low > 109
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_09335 3-methylcrotonyl-CoA carboxylase 0.51 OKGIIK_08425 hutI imidazolonepropionase low > 52
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS23275 3-methylcrotonyl-CoA carboxylase subunit alpha 0.52 BPHYT_RS07575 imidazolonepropionase low > 109
Castellaniella sp019104865 MT123 0.42 ABCV34_RS12350 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.50 ABCV34_RS12775 imidazolonepropionase low > 48
Rhodanobacter denitrificans MT42 0.41 LRK55_RS02035 biotin carboxylase N-terminal domain-containing protein 0.51 LRK55_RS15980 imidazolonepropionase low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS02280 ATP-grasp domain-containing protein 0.52 LRK54_RS16230 imidazolonepropionase low > 59
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_01343 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.52 H281DRAFT_04869 imidazolonepropionase low > 103
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS20625 biotin carboxylase N-terminal domain-containing protein 0.51 ABZR86_RS07870 imidazolonepropionase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF1711 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.46 GFF3588 Imidazolonepropionase (EC 3.5.2.7) 0.66 74
Variovorax sp. SCN45 0.40 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.51 GFF6402 Imidazolonepropionase (EC 3.5.2.7) low > 127
Variovorax sp. OAS795 0.40 ABID97_RS25115 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.51 ABID97_RS03435 imidazolonepropionase low > 91
Sinorhizobium meliloti 1021 0.40 SM_b21124 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.43 SM_b21166 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 103
Phaeobacter inhibens DSM 17395 0.39 PGA1_c10330 methylcrotonoyl-CoA carboxylase subunit alpha 0.49 PGA1_c36350 Imidazolonepropionase (EC 3.5.2.7) (from data)
Rhodospirillum rubrum S1H 0.38 Rru_A1941 acyl-CoA carboxylase alpha chain (NCBI) 0.53 Rru_A1303 Imidazolonepropionase (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_4056 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.47 Ga0059261_3964 Imidazolonepropionase (EC 3.5.2.7) (from data) low > 68
Rhizobium sp. OAE497 0.38 ABIE40_RS20775 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.46 ABIE40_RS20350 imidazolonepropionase low > 107
Bosea sp. OAE506 0.37 ABIE41_RS14850 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.56 ABIE41_RS23640 imidazolonepropionase low > 77
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit 0.49 CCNA_01011 imidazolonepropionase low > 67
Caulobacter crescentus NA1000 0.35 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit 0.49 CCNA_01011 imidazolonepropionase low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS03810 biotin carboxylase N-terminal domain-containing protein 0.50 A4249_RS06605 imidazolonepropionase low > 48

Not shown: 11 genomes with orthologs for Shew_2573 only; 22 genomes with orthologs for Shew_3759 only