Conservation of cofitness between Shew_2883 and Shew_2839 in Shewanella loihica PV-4

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2883 BolA family protein (RefSeq) 1.0 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.39 16
Shewanella amazonensis SB2B 0.62 Sama_2545 putative cell division protein BolA (RefSeq) 0.89 Sama_2504 carbamoyl phosphate synthase small subunit (RefSeq) low > 62
Shewanella sp. ANA-3 0.59 Shewana3_0934 transcriptional regulator BolA (RefSeq) 0.88 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO1099 bolA bolA protein (NCBI ptt file) 0.90 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.50 DZA65_RS06000 transcriptional regulator BolA 0.77 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 75
Dickeya dianthicola 67-19 0.50 HGI48_RS05675 transcriptional regulator BolA 0.77 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 71
Dickeya dadantii 3937 0.50 DDA3937_RS05630 transcriptional regulator BolA 0.76 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 74
Erwinia tracheiphila SCR3 0.45 LU632_RS18360 bolA transcriptional regulator BolA 0.72 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 74
Pectobacterium carotovorum WPP14 0.45 HER17_RS15860 transcriptional regulator BolA 0.76 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 75
Serratia liquefaciens MT49 0.45 IAI46_05000 transcriptional regulator BolA 0.76 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4351 Cell division protein BolA 0.77 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) low > 78
Pantoea sp. MT58 0.44 IAI47_14665 transcriptional regulator BolA 0.74 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 76
Rahnella sp. WP5 0.44 EX31_RS22235 transcriptional regulator BolA 0.76 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.49 88
Enterobacter sp. TBS_079 0.44 MPMX20_01026 DNA-binding transcriptional regulator BolA 0.75 MPMX20_00739 Carbamoyl-phosphate synthase small chain low > 85
Klebsiella michiganensis M5al 0.44 BWI76_RS06510 BolA family transcriptional regulator 0.77 BWI76_RS04465 carbamoyl-phosphate synthase small subunit low > 92
Escherichia coli BL21 0.43 ECD_00386 stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC 0.77 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase low > 60
Escherichia coli BW25113 0.43 b0435 bolA possible regulator of murein genes (VIMSS) 0.77 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.43 ECOLIN_RS02610 transcriptional regulator BolA 0.77 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 52
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2536 Stress-induced morphogen (activity unknown) 0.76 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit
Escherichia coli ECRC98 0.42 JDDGAC_12000 bolA transcriptional regulator BolA 0.77 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC99 0.42 KEDOAH_19620 bolA transcriptional regulator BolA 0.77 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECOR27 0.42 NOLOHH_01280 bolA transcriptional regulator BolA 0.77 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit low > 57
Escherichia fergusonii Becca 0.42 EFB2_03622 DNA-binding transcriptional regulator BolA 0.77 EFB2_04013 Carbamoyl-phosphate synthase small chain low > 86
Escherichia coli ECRC62 0.42 BNILDI_22695 bolA transcriptional regulator BolA 0.77 BNILDI_08325 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC101 0.42 MCAODC_27570 bolA transcriptional regulator BolA 0.77 MCAODC_01460 carA carbamoyl phosphate synthase small subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_03238 DNA-binding transcriptional regulator BolA 0.77 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain low > 73
Alteromonas macleodii MIT1002 0.42 MIT1002_00691 transcriptional regulator BolA 0.73 MIT1002_01466 Carbamoyl-phosphate synthase small chain low > 70
Escherichia coli ECRC102 0.42 NIAGMN_06400 bolA transcriptional regulator BolA 0.77 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC101 0.42 OKFHMN_08345 bolA transcriptional regulator BolA 0.77 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECOR38 0.42 HEPCGN_06960 bolA transcriptional regulator BolA 0.77 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit low > 85
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_11680 protein BolA 0.79 CSW01_12105 carbamoyl-phosphate synthase small subunit low > 62
Marinobacter adhaerens HP15 0.42 HP15_1187 BolA-like protein 0.71 HP15_3078 carbamoyl-phosphate synthase small chain low > 73
Acinetobacter radioresistens SK82 0.39 MPMX26_00070 DNA-binding transcriptional regulator BolA 0.66 MPMX26_00767 Carbamoyl-phosphate synthase small chain low > 36
Pseudomonas sp. S08-1 0.38 OH686_21030 Cell division protein BolA 0.69 OH686_17075 Carbamoyl-phosphate synthase small chain
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_2162 Cell division protein BolA 0.69 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_2534 Cell division protein BolA 0.70 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas sp. RS175 0.37 PFR28_00891 DNA-binding transcriptional regulator BolA 0.69 PFR28_00076 Carbamoyl-phosphate synthase small chain
Sinorhizobium meliloti 1021 0.36 SMc00698 transcriptional regulator 0.47 SMc01569 carbamoyl phosphate synthase small subunit low > 103
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_03535 BolA family transcriptional regulator 0.70 AO356_07485 carbamoyl phosphate synthase small subunit
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_365 Cell division protein BolA 0.69 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_02140 BolA family transcriptional regulator 0.70 AO353_05635 carbamoyl phosphate synthase small subunit
Pseudomonas simiae WCS417 0.35 PS417_19190 BolA family transcriptional regulator 0.69 PS417_24045 carbamoyl phosphate synthase small subunit
Pseudomonas putida KT2440 0.34 PP_1757 DNA-binding transcriptional dual regulator 0.69 PP_4724 Carbamoyl-phosphate synthase small chain low > 96
Pseudomonas stutzeri RCH2 0.34 Psest_2680 transcriptional regulator, BolA protein family 0.70 Psest_0967 carbamoyl-phosphate synthase, small subunit
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_3659 transcriptional regulator, BolA protein family 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_3659 transcriptional regulator, BolA protein family 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit
Pseudomonas fluorescens SBW25 0.33 PFLU_RS21160 BolA family transcriptional regulator 0.69 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS21160 BolA family transcriptional regulator 0.69 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Agrobacterium fabrum C58 0.33 Atu3624 stress induced morphogen 0.46 Atu2170 carbamoylphosphate synthase small chain
Rhizobium sp. OAE497 0.33 ABIE40_RS17660 BolA family protein 0.45 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS18930 BolA family transcriptional regulator 0.65 RR42_RS13520 carbamoyl phosphate synthase small subunit
Rhodopseudomonas palustris CGA009 0.29 TX73_002600 BolA family transcriptional regulator 0.48 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1274 Stress-induced morphogen (activity unknown) 0.47 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit
Ralstonia solanacearum GMI1000 0.27 RS_RS14805 BolA family transcriptional regulator 0.64 RS_RS07620 carbamoyl-phosphate synthase small subunit
Azospirillum brasilense Sp245 0.27 AZOBR_RS03200 BolA family transcriptional regulator 0.50 AZOBR_RS10920 carbamoyl phosphate synthase small subunit
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_05649 transcriptional regulator, BolA protein family 0.63 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit
Paraburkholderia graminis OAS925 0.26 ABIE53_003704 acid stress-induced BolA-like protein IbaG/YrbA 0.64 ABIE53_003005 carbamoyl-phosphate synthase small subunit
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS17725 BolA family transcriptional regulator 0.63 BPHYT_RS14195 carbamoyl phosphate synthase small subunit low > 109
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.2361.1 Cell division protein BolA 0.68 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS02845 BolA family protein 0.64 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Magnetospirillum magneticum AMB-1 0.25 AMB_RS19805 BolA family transcriptional regulator 0.50 AMB_RS03600 carbamoyl-phosphate synthase small subunit
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS27880 BolA family protein 0.67 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Bosea sp. OAE506 0.25 ABIE41_RS07950 BolA family protein 0.47 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Acidovorax sp. GW101-3H11 0.24 Ac3H11_4720 YrbA protein 0.62 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_03106 BolA protein 0.46 CCNA_02925 carbamoyl-phosphate synthase small chain low > 67
Caulobacter crescentus NA1000 0.24 CCNA_03106 BolA protein 0.46 CCNA_02925 carbamoyl-phosphate synthase small chain

Not shown: 0 genomes with orthologs for Shew_2883 only; 38 genomes with orthologs for Shew_2839 only