Conservation of cofitness between BT2843 and BT1342 in Bacteroides thetaiotaomicron VPI-5482

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT2843 integrase (NCBI ptt file) 1.0 BT1342 putative UDP-glucuronic acid epimerase (NCBI ptt file) 0.54 6
Phocaeicola vulgatus CL09T03C04 0.75 HMPREF1058_RS09680 site-specific tyrosine recombinase XerD 0.55 HMPREF1058_RS18480 NAD-dependent epimerase low > 67
Phocaeicola dorei CL03T12C01 0.75 ABI39_RS07000 site-specific tyrosine recombinase XerD 0.55 ABI39_RS14815 NAD-dependent epimerase low > 72
Mucilaginibacter yixingensis YX-36 DSM 26809 0.49 ABZR88_RS10220 site-specific tyrosine recombinase XerD 0.56 ABZR88_RS17530 NAD-dependent epimerase low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.48 CA264_00850 site-specific tyrosine recombinase XerD 0.57 CA264_00975 NAD-dependent epimerase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_1809 tyrosine recombinase XerD 0.59 Echvi_3804 Nucleoside-diphosphate-sugar epimerases low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.47 CA265_RS09520 site-specific tyrosine recombinase XerD 0.57 CA265_RS07970 NAD-dependent epimerase low > 88
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_04365 recombinase XerD 0.17 AO353_06770 NAD-dependent dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3011 Tyrosine recombinase XerD 0.51 Pf1N1B4_5885 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 87
Pseudomonas sp. RS175 0.34 PFR28_00331 Tyrosine recombinase XerD 0.50 PFR28_02769 UDP-N-acetylglucosamine 4-epimerase low > 88
Pseudomonas fluorescens SBW25 0.34 PFLU_RS24560 site-specific tyrosine recombinase XerD 0.17 PFLU_RS02390 NAD-dependent epimerase/dehydratase family protein — —
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_3145 Tyrosine recombinase XerD 0.51 Pf6N2E2_1139 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) — —
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_06385 recombinase XerD 0.50 AO356_26320 protein CapI low > 104
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS24560 site-specific tyrosine recombinase XerD 0.17 PFLU_RS02390 NAD-dependent epimerase/dehydratase family protein — —
Pseudomonas simiae WCS417 0.34 PS417_22895 tyrosine recombinase XerD 0.18 PS417_02315 NAD-dependent dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_1286 tyrosine recombinase XerD subunit 0.47 Psyr_5106 NAD-dependent epimerase/dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_1286 tyrosine recombinase XerD subunit 0.47 Psyr_5106 NAD-dependent epimerase/dehydratase low > 86
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU1654 xerD site-specific recombinase, phage integrase family (TIGR) 0.55 DVU3356 NAD-dependent epimerase/dehydratase family protein (TIGR) — —
Pseudomonas sp. S08-1 0.33 OH686_17750 tyrosine recombinase XerD 0.18 OH686_15630 UDP-glucose 4-epimerase — —
Shewanella amazonensis SB2B 0.32 Sama_2739 integrase/recombinase XerD (RefSeq) 0.51 Sama_2235 NAD dependent epimerase/dehydratase family protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.32 MIT1002_00786 Tyrosine recombinase XerD 0.58 MIT1002_02835 dTDP-glucose 4,6-dehydratase 2 — —
Dechlorosoma suillum PS 0.32 Dsui_1217 tyrosine recombinase XerD 0.55 Dsui_0401 nucleoside-diphosphate-sugar epimerase low > 51
Shewanella sp. ANA-3 0.31 Shewana3_3331 tyrosine recombinase XerD (RefSeq) 0.55 Shewana3_4089 NAD-dependent epimerase/dehydratase (RefSeq) low > 73
Desulfovibrio vulgaris Miyazaki F 0.31 DvMF_0359 tyrosine recombinase XerD (RefSeq) 0.54 DvMF_2048 NAD-dependent epimerase/dehydratase (RefSeq) — —
Marinobacter adhaerens HP15 0.31 HP15_762 site-specific tyrosine recombinase XerD 0.55 HP15_2023 UDP-glucuronic acid epimerase — —
Rahnella sp. WP5 0.31 EX31_RS13480 site-specific tyrosine recombinase XerD 0.55 EX31_RS10090 NAD-dependent epimerase 0.49 38
Shewanella oneidensis MR-1 0.31 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) 0.56 SO4686 NAD dependent epimerase/dehydratase family protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.31 IAI46_20730 site-specific tyrosine recombinase XerD 0.57 IAI46_14235 NAD-dependent epimerase — —
Dickeya dianthicola 67-19 0.31 HGI48_RS03440 site-specific tyrosine recombinase XerD 0.56 HGI48_RS06820 NAD-dependent epimerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF5461 Tyrosine recombinase XerD 0.52 GFF124 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 90
Dickeya dianthicola ME23 0.31 DZA65_RS03485 site-specific tyrosine recombinase XerD 0.55 DZA65_RS07160 NAD-dependent epimerase — —
Klebsiella michiganensis M5al 0.30 BWI76_RS23815 site-specific tyrosine recombinase XerD 0.57 BWI76_RS18995 NAD-dependent epimerase — —
Enterobacter sp. TBS_079 0.30 MPMX20_03753 Tyrosine recombinase XerD 0.57 MPMX20_03010 UDP-glucose 4-epimerase 0.30 66
Acinetobacter radioresistens SK82 0.30 MPMX26_00169 Tyrosine recombinase XerD 0.17 MPMX26_00051 UDP-N-acetylglucosamine 4-epimerase — —
Enterobacter asburiae PDN3 0.30 EX28DRAFT_2945 tyrosine recombinase XerD 0.58 EX28DRAFT_0531 Nucleoside-diphosphate-sugar epimerases low > 76
Dickeya dadantii 3937 0.30 DDA3937_RS03300 site-specific tyrosine recombinase XerD 0.55 DDA3937_RS06785 NAD-dependent epimerase — —
Pantoea sp. MT58 0.30 IAI47_03820 site-specific tyrosine recombinase XerD 0.56 IAI47_09040 NAD-dependent epimerase low > 76
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.847.1 Site-specific tyrosine recombinase 0.43 Xcc-8004.4890.1 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS15025 tyrosine recombinase XerC 0.54 ABZR86_RS09700 NAD-dependent epimerase low > 74
Magnetospirillum magneticum AMB-1 0.29 AMB_RS19880 site-specific tyrosine recombinase XerD 0.47 AMB_RS10910 nucleoside-diphosphate sugar epimerase — —
Lysobacter sp. OAE881 0.29 ABIE51_RS04495 site-specific tyrosine recombinase XerD 0.50 ABIE51_RS07830 NAD-dependent epimerase low > 62
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD 0.52 OKGIIK_10115 Capsular biosynthesis protein CpsI — —
Erwinia tracheiphila SCR3 0.29 LU632_RS05975 xerD site-specific tyrosine recombinase XerD 0.53 LU632_RS12910 NAD-dependent epimerase — —
Rhodanobacter denitrificans MT42 0.29 LRK55_RS04515 site-specific tyrosine recombinase XerD 0.52 LRK55_RS02985 NAD-dependent epimerase — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS04735 site-specific tyrosine recombinase XerD 0.52 LRK54_RS03235 NAD-dependent epimerase — —
Sinorhizobium meliloti 1021 0.29 SMc00691 site-specific tyrosine recombinase XerD 0.43 SMc02640 UDP-glucuronic acid epimerase low > 103
Rhizobium sp. OAE497 0.29 ABIE40_RS17685 site-specific tyrosine recombinase XerD 0.43 ABIE40_RS14855 NAD-dependent epimerase low > 107
Rhodospirillum rubrum S1H 0.29 Rru_A3738 Phage integrase (NCBI) 0.48 Rru_A3576 UDP-glucuronate 5'-epimerase (NCBI) — —
Azospirillum brasilense Sp245 0.28 AZOBR_RS03240 recombinase XerD 0.44 AZOBR_RS09110 UDP-glucose/glucuronate epimerase — —
Rhodopseudomonas palustris CGA009 0.28 TX73_002625 site-specific tyrosine recombinase XerD 0.49 TX73_020625 NAD-dependent epimerase 0.44 10
Caulobacter crescentus NA1000 0.27 CCNA_03101 site-specific tyrosine recombinase XerD 0.42 CCNA_02463 UDP-N-acetylglucosamine 4-epimerase — —
Azospirillum sp. SherDot2 0.27 MPMX19_02643 Tyrosine recombinase XerD 0.45 MPMX19_01802 UDP-N-acetylglucosamine 4-epimerase — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03101 site-specific tyrosine recombinase XerD 0.42 CCNA_02463 UDP-N-acetylglucosamine 4-epimerase — —
Agrobacterium fabrum C58 0.26 Atu3629 site-specific tyrosine recombinase XerD 0.43 Atu4148 UDP-glucuronic acid epimerase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS04165 site-specific tyrosine recombinase XerD 0.42 A4249_RS02195 SDR family NAD(P)-dependent oxidoreductase — —
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_3595 Site-specific recombinase XerD 0.42 Ga0059261_4077 Nucleoside-diphosphate-sugar epimerases low > 68
Bosea sp. OAE506 0.26 ABIE41_RS06100 site-specific tyrosine recombinase XerD 0.46 ABIE41_RS10525 NAD-dependent epimerase low > 77

Not shown: 46 genomes with orthologs for BT2843 only; 0 genomes with orthologs for BT1342 only