| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b0426 | yajQ | orf, hypothetical protein (VIMSS) | 1.0 | b2284 | nuoF | NADH:ubiquinone oxidoreductase, chain F (NCBI) | 0.27 | 15 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_01340 | yajQ | nucleotide binding protein YajQ | 1.00 | NOLOHH_14480 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia fergusonii Becca | 1.00 | EFB2_03631 | | hypothetical protein | 1.00 | EFB2_01575 | | NADH-quinone oxidoreductase subunit F | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03250 | | hypothetical protein | 1.00 | OHPLBJKB_01422 | | NADH-quinone oxidoreductase subunit F | low | > 73 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_27615 | yajQ | nucleotide binding protein YajQ | 1.00 | MCAODC_13900 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_19575 | yajQ | nucleotide binding protein YajQ | 1.00 | KEDOAH_05335 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS02565 | | nucleotide binding protein YajQ | 1.00 | ECOLIN_RS13265 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_12045 | yajQ | nucleotide binding protein YajQ | 1.00 | JDDGAC_26825 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_08390 | yajQ | nucleotide binding protein YajQ | 1.00 | OKFHMN_22860 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_22755 | yajQ | nucleotide binding protein YajQ | 1.00 | BNILDI_13400 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_06445 | yajQ | nucleotide binding protein YajQ | 1.00 | NIAGMN_20630 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_07020 | yajQ | nucleotide binding protein YajQ | 1.00 | HEPCGN_22065 | nuoF | NADH-quinone oxidoreductase subunit NuoF | low | > 85 |
| Escherichia coli BL21 | 1.00 | ECD_00374 | | phage Phi6 host factor, ATP/GTP binding protein | 1.00 | ECD_02209 | | NADH:ubiquinone oxidoreductase, chain F | low | > 60 |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_2545 | | Uncharacterized protein conserved in bacteria | 0.96 | EX28DRAFT_0325 | | NADH-quinone oxidoreductase, F subunit | low | > 76 |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS06410 | | YajQ family cyclic di-GMP-binding protein | 0.96 | BWI76_RS20170 | | NADH-quinone oxidoreductase subunit F | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.91 | GFF4337 | | FIG001943: hypothetical protein YajQ | 0.99 | GFF1887 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_01017 | | hypothetical protein | 0.96 | MPMX20_03214 | | NADH-quinone oxidoreductase subunit F | low | > 85 |
| Erwinia tracheiphila SCR3 | 0.79 | LU632_RS18450 | | YajQ family cyclic di-GMP-binding protein | 0.90 | LU632_RS07985 | nuoF | NADH-quinone oxidoreductase subunit NuoF | low | > 74 |
| Rahnella sp. WP5 | 0.79 | EX31_RS22185 | | YajQ family cyclic di-GMP-binding protein | 0.90 | EX31_RS19415 | | NADH-quinone oxidoreductase subunit NuoF | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.79 | HER17_RS15905 | | YajQ family cyclic di-GMP-binding protein | 0.89 | HER17_RS07145 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Serratia liquefaciens MT49 | 0.78 | IAI46_04955 | | YajQ family cyclic di-GMP-binding protein | 0.91 | IAI46_17690 | | NADH-quinone oxidoreductase subunit NuoF | low | > 86 |
| Pantoea sp. MT58 | 0.78 | IAI47_14710 | | YajQ family cyclic di-GMP-binding protein | 0.91 | IAI47_06380 | | NADH-quinone oxidoreductase subunit NuoF | low | > 76 |
| Dickeya dianthicola 67-19 | 0.77 | HGI48_RS05620 | | YajQ family cyclic di-GMP-binding protein | 0.88 | HGI48_RS14290 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Dickeya dianthicola ME23 | 0.76 | DZA65_RS05945 | | YajQ family cyclic di-GMP-binding protein | 0.88 | DZA65_RS14965 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Dickeya dadantii 3937 | 0.76 | DDA3937_RS05560 | | YajQ family cyclic di-GMP-binding protein | 0.88 | DDA3937_RS14315 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Kangiella aquimarina DSM 16071 | 0.63 | B158DRAFT_0029 | | Uncharacterized protein conserved in bacteria | 0.40 | B158DRAFT_0122 | | NADH-quinone oxidoreductase, F subunit | low | > 40 |
| Shewanella oneidensis MR-1 | 0.63 | SO3815 | | conserved hypothetical protein (NCBI ptt file) | 0.80 | SO1017 | nuoF | NADH dehydrogenase I, F subunit (NCBI ptt file) | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.4605.1 | | FIG001943: hypothetical protein YajQ | 0.35 | Xcc-8004.1988.1 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Lysobacter sp. OAE881 | 0.48 | ABIE51_RS18465 | | YajQ family cyclic di-GMP-binding protein | 0.37 | ABIE51_RS08335 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_17960 | | nucleotide-binding protein | 0.74 | AO356_22050 | | NADH dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.47 | Pf6N2E2_5522 | | FIG001943: hypothetical protein YajQ | 0.74 | Pf6N2E2_273 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Rhodanobacter sp. FW510-T8 | 0.46 | OKGIIK_03500 | yajQ | YajQ family cyclic di-GMP-binding protein | 0.36 | OKGIIK_05790 | nuoF | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Pseudomonas sp. S08-1 | 0.46 | OH686_08210 | | UPF0234 protein Yitk | 0.75 | OH686_00135 | | NADH oxidoreductase (quinone), F subunit | low | > 80 |
| Acinetobacter radioresistens SK82 | 0.46 | MPMX26_02644 | | hypothetical protein | 0.62 | MPMX26_02551 | | NADH-quinone oxidoreductase subunit F | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_1840 | | FIG001943: hypothetical protein YajQ | 0.75 | PfGW456L13_2629 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Pseudomonas putida KT2440 | 0.46 | PP_1352 | | UPF0234 protein PP_1352 | 0.76 | PP_4123 | | NADH-quinone oxidoreductase subunit F | — | — |
| Pseudomonas simiae WCS417 | 0.46 | PS417_22510 | | nucleotide-binding protein | 0.75 | PS417_16595 | | NADH dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_03640 | | nucleotide-binding protein | 0.75 | AO353_27760 | | NADH dehydrogenase | — | — |
| Pseudomonas sp. RS175 | 0.46 | PFR28_03425 | | hypothetical protein | 0.75 | PFR28_02631 | | NADH-quinone oxidoreductase subunit F | — | — |
| Rhodanobacter denitrificans MT42 | 0.46 | LRK55_RS14390 | | YajQ family cyclic di-GMP-binding protein | 0.36 | LRK55_RS00880 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS24150 | | YajQ family cyclic di-GMP-binding protein | 0.75 | PFLU_RS18635 | | NADH-quinone oxidoreductase subunit NuoF | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS24150 | | YajQ family cyclic di-GMP-binding protein | 0.75 | PFLU_RS18635 | | NADH-quinone oxidoreductase subunit NuoF | low | > 109 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS00410 | | YajQ family cyclic di-GMP-binding protein | 0.35 | ABZR86_RS06090 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_650 | | FIG001943: hypothetical protein YajQ | 0.74 | Pf1N1B4_4037 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_4087 | | Protein of unknown function DUF520 | 0.77 | Psyr_3201 | | NADH dehydrogenase subunit F | — | — |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS15080 | | YajQ family cyclic di-GMP-binding protein | 0.38 | ABCV34_RS08725 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_4087 | | Protein of unknown function DUF520 | 0.77 | Psyr_3201 | | NADH dehydrogenase subunit F | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS14675 | | YajQ family cyclic di-GMP-binding protein | 0.36 | LRK54_RS01105 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Variovorax sp. SCN45 | 0.44 | GFF3099 | | UPF0234 protein Yitk | 0.37 | GFF4755 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS21685 | | YajQ family cyclic di-GMP-binding protein | 0.37 | ABID97_RS20470 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.44 | GFF292 | | FIG001943: hypothetical protein YajQ | 0.36 | GFF3686 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_2620 | | FIG001943: hypothetical protein YajQ | 0.36 | Ac3H11_1447 | | NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.43 | ABZR88_RS04840 | | YajQ family cyclic di-GMP-binding protein | 0.39 | ABZR88_RS17145 | | NADH-quinone oxidoreductase subunit NuoF | 0.41 | 41 |
| Magnetospirillum magneticum AMB-1 | 0.43 | AMB_RS18375 | | nucleotide-binding protein | 0.36 | AMB_RS13985 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS12780 | | nucleotide-binding protein | 0.36 | RS_RS10320 | | NADH-quinone oxidoreductase subunit F | — | — |
| Ralstonia solanacearum PSI07 | 0.41 | RPSI07_RS12140 | | YajQ family cyclic di-GMP-binding protein | 0.35 | RPSI07_RS14360 | | NADH-quinone oxidoreductase subunit F | — | — |
| Herbaspirillum seropedicae SmR1 | 0.41 | HSERO_RS07165 | | nucleotide-binding protein | 0.37 | HSERO_RS08845 | | NADH dehydrogenase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS05160 | | YajQ family cyclic di-GMP-binding protein | 0.36 | RALBFv3_RS02950 | | NADH-quinone oxidoreductase subunit F | — | — |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS00820 | | YajQ family cyclic di-GMP-binding protein | 0.36 | ABZR87_RS14855 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS08465 | | YajQ family cyclic di-GMP-binding protein | 0.36 | UW163_RS10775 | | NADH-quinone oxidoreductase subunit F | — | — |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS21810 | | nucleotide-binding protein | 0.37 | AZOBR_RS07190 | | NADH dehydrogenase | — | — |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_04413 | | hypothetical protein | 0.37 | MPMX19_01741 | | NADH-quinone oxidoreductase subunit F | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS17155 | | nucleotide-binding protein | 0.37 | RR42_RS05535 | | NADH dehydrogenase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.39 | CA264_15545 | | YajQ family cyclic di-GMP-binding protein | 0.56 | CA264_04250 | | NADH oxidoreductase (quinone) subunit F | low | > 74 |
| Mycobacterium tuberculosis H37Rv | 0.38 | Rv0566c | | Conserved protein | 0.44 | Rv3150 | | Probable NADH dehydrogenase I (chain F) NuoF (NADH-ubiquinone oxidoreductase chain F) | low | > 58 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.38 | H281DRAFT_04122 | | hypothetical protein | 0.37 | H281DRAFT_04572 | | NADH dehydrogenase subunit F | — | — |
| Paraburkholderia graminis OAS925 | 0.38 | ABIE53_003357 | | uncharacterized protein YajQ (UPF0234 family) | 0.37 | ABIE53_001595 | | NADH-quinone oxidoreductase subunit F | — | — |
| Dechlorosoma suillum PS | 0.38 | Dsui_3245 | | hypothetical protein | 0.39 | Dsui_3045 | | NADH-quinone oxidoreductase, F subunit | — | — |
| Burkholderia phytofirmans PsJN | 0.38 | BPHYT_RS15930 | | nucleotide-binding protein | 0.37 | BPHYT_RS06650 | | NADH dehydrogenase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.37 | CA265_RS09840 | | YajQ family cyclic di-GMP-binding protein | 0.38 | CA265_RS23555 | | NADH-quinone oxidoreductase subunit F | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS02775 | | YajQ family cyclic di-GMP-binding protein | 0.35 | QEN71_RS24125 | | NADH-quinone oxidoreductase subunit NuoF | — | — |
Not shown: 10 genomes with orthologs for b0426 only; 12 genomes with orthologs for b2284 only