Conservation of cofitness between b4015 and b0198 in Escherichia coli BW25113

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b4015 aceA isocitrate lyase (NCBI) 1.0 b0198 metI DL-methionine transporter subunit (NCBI) 0.19 20
Escherichia coli BL21 1.00 ECD_03887 isocitrate lyase 1.00 ECD_00197 DL-methionine transporter subunit low > 60
Escherichia coli ECOR38 1.00 HEPCGN_11905 aceA isocitrate lyase 1.00 HEPCGN_07995 metI D-methionine transport system permease protein MetI low > 85
Escherichia coli ECOR27 1.00 NOLOHH_05410 aceA isocitrate lyase 1.00 NOLOHH_02400 metI D-methionine transport system permease protein MetI low > 57
Escherichia coli ECRC62 1.00 BNILDI_06110 aceA isocitrate lyase 1.00 BNILDI_09270 metI D-methionine transport system permease protein MetI — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04035 Isocitrate lyase 1.00 OHPLBJKB_03463 D-methionine transport system permease protein MetI low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS26870 isocitrate lyase 1.00 ECOLIN_RS01090 methionine ABC transporter permease MetI — —
Escherichia fergusonii Becca 1.00 EFB2_04595 Isocitrate lyase 1.00 EFB2_03845 D-methionine transport system permease protein MetI low > 86
Escherichia coli ECRC99 1.00 KEDOAH_14895 aceA isocitrate lyase 1.00 KEDOAH_18100 metI D-methionine transport system permease protein MetI — —
Escherichia coli ECRC102 1.00 NIAGMN_11015 aceA isocitrate lyase 1.00 NIAGMN_07905 metI D-methionine transport system permease protein MetI — —
Escherichia coli ECRC101 1.00 OKFHMN_13265 aceA isocitrate lyase 1.00 OKFHMN_10055 metI D-methionine transport system permease protein MetI — —
Escherichia coli ECRC101 1.00 MCAODC_03765 aceA isocitrate lyase 1.00 MCAODC_00570 metI D-methionine transport system permease protein MetI — —
Escherichia coli ECRC98 1.00 JDDGAC_16890 aceA isocitrate lyase 1.00 JDDGAC_13650 metI D-methionine transport system permease protein MetI — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF1352 Isocitrate lyase (EC 4.1.3.1) 0.82 GFF22 Methionine ABC transporter permease protein low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS01665 Isocitrate lyase (EC 4.1.3.1) (from data) 0.86 BWI76_RS05360 methionine ABC transporter permease low > 92
Enterobacter asburiae PDN3 0.95 EX28DRAFT_4329 isocitrate lyase 0.87 EX28DRAFT_3786 ABC-type metal ion transport system, permease component low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_00232 Isocitrate lyase 0.87 MPMX20_00882 D-methionine transport system permease protein MetI low > 85
Pectobacterium carotovorum WPP14 0.89 HER17_RS02295 isocitrate lyase 0.83 HER17_RS04375 methionine ABC transporter permease MetI low > 75
Dickeya dianthicola 67-19 0.89 HGI48_RS19145 isocitrate lyase 0.80 HGI48_RS16920 methionine ABC transporter permease MetI low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS20265 isocitrate lyase 0.80 DZA65_RS17995 methionine ABC transporter permease MetI low > 75
Dickeya dadantii 3937 0.88 DDA3937_RS19055 isocitrate lyase 0.80 DDA3937_RS16850 methionine ABC transporter permease MetI low > 74
Rahnella sp. WP5 0.87 EX31_RS11745 isocitrate lyase 0.79 EX31_RS12885 methionine ABC transporter permease MetI low > 89
Serratia liquefaciens MT49 0.87 IAI46_23190 isocitrate lyase 0.81 IAI46_20080 methionine ABC transporter permease MetI low > 86
Pantoea sp. MT58 0.84 IAI47_18005 isocitrate lyase 0.82 IAI47_15390 methionine ABC transporter permease MetI low > 76
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_03830 isocitrate lyase 0.52 CSW01_04640 methionine ABC transporter permease low > 62
Dechlorosoma suillum PS 0.75 Dsui_0011 isocitrate lyase 0.35 Dsui_2067 ABC-type metal ion transport system, permease component low > 51
Variovorax sp. OAS795 0.75 ABID97_RS11115 isocitrate lyase 0.32 ABID97_RS21740 methionine ABC transporter permease low > 91
Pseudomonas fluorescens SBW25 0.74 PFLU_RS18610 isocitrate lyase 0.44 PFLU_RS01170 ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS18610 isocitrate lyase 0.44 PFLU_RS01170 ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_27735 isocitrate lyase 0.43 AO353_11630 ABC transporter permease low > 101
Variovorax sp. SCN45 0.74 GFF4829 Isocitrate lyase (EC 4.1.3.1) 0.32 GFF3113 Methionine ABC transporter permease protein low > 127
Pseudomonas simiae WCS417 0.74 PS417_16570 isocitrate lyase 0.40 PS417_01060 ABC transporter permease low > 88
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_2633 Isocitrate lyase (EC 4.1.3.1) 0.42 PfGW456L13_454 Methionine ABC transporter permease protein low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.74 GFF4147 Isocitrate lyase (EC 4.1.3.1) 0.48 GFF5038 Methionine ABC transporter permease protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3196 isocitrate lyase 0.38 Psyr_0282 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_4042 Isocitrate lyase (EC 4.1.3.1) (from data) 0.38 Pf1N1B4_1703 Methionine ABC transporter permease protein low > 87
Pseudomonas sp. RS175 0.74 PFR28_02625 Isocitrate lyase 0.42 PFR28_04846 D-methionine transport system permease protein MetI low > 88
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3196 isocitrate lyase 0.38 Psyr_0282 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_279 Isocitrate lyase (EC 4.1.3.1) 0.42 Pf6N2E2_3928 Methionine ABC transporter permease protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_22080 isocitrate lyase 0.42 AO356_10280 ABC transporter permease low > 104
Acidovorax sp. GW101-3H11 0.73 Ac3H11_2831 Isocitrate lyase (EC 4.1.3.1) (from data) 0.44 Ac3H11_632 Methionine ABC transporter permease protein low > 79
Pseudomonas putida KT2440 0.73 PP_4116 isocitrate lyase 0.41 PP_0219 L,D-methionine D-methionine ABC transporter - permease subunit low > 96
Castellaniella sp019104865 MT123 0.71 ABCV34_RS06915 isocitrate lyase 0.41 ABCV34_RS09540 methionine ABC transporter permease low > 48
Paraburkholderia graminis OAS925 0.69 ABIE53_002536 isocitrate lyase 0.44 ABIE53_003138 D-methionine transport system permease protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_00580 isocitrate lyase 0.44 H281DRAFT_03905 D-methionine transport system permease protein low > 103
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS06270 isocitrate lyase 0.48 QEN71_RS04165 methionine ABC transporter permease low > 153
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS10565 isocitrate lyase 0.43 HSERO_RS04975 methionine ABC transporter permease low > 78
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS12200 isocitrate lyase 0.45 RR42_RS04560 methionine ABC transporter permease low > 128
Rhodanobacter denitrificans MT42 0.68 LRK55_RS10225 isocitrate lyase 0.39 LRK55_RS14445 methionine ABC transporter permease low > 63
Rhodanobacter denitrificans FW104-10B01 0.68 LRK54_RS10585 isocitrate lyase 0.39 LRK54_RS14730 ABC transporter permease low > 59
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.311.1 Isocitrate lyase (EC 4.1.3.1) 0.37 Xcc-8004.4602.1 Methionine ABC transporter permease protein low > 74
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS12285 isocitrate lyase 0.48 BPHYT_RS14815 methionine ABC transporter permease low > 109
Rhodanobacter sp. FW510-T8 0.67 OKGIIK_13320 aceA isocitrate lyase 0.42 OKGIIK_03555 metP metal ABC transporter permease low > 52
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS13490 isocitrate lyase 0.40 ABZR86_RS00470 methionine ABC transporter permease low > 74
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS00150 isocitrate lyase 0.46 RALBFv3_RS13845 ABC transporter permease low > 76
Ralstonia solanacearum UW163 0.67 UW163_RS13480 isocitrate lyase 0.46 UW163_RS15965 ABC transporter permease — —
Ralstonia solanacearum PSI07 0.67 RPSI07_RS17335 isocitrate lyase 0.43 RPSI07_RS19625 ABC transporter permease low > 81
Ralstonia solanacearum GMI1000 0.66 RS_RS06810 isocitrate lyase 0.44 RS_RS04580 ABC transporter permease low > 80
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS11590 isocitrate lyase 0.45 ABZR87_RS09535 methionine ABC transporter permease low > 80
Azospirillum sp. SherDot2 0.59 MPMX19_05830 Isocitrate lyase 0.46 MPMX19_05548 D-methionine transport system permease protein MetI low > 112
Sinorhizobium meliloti 1021 0.57 SMc00768 isocitrate lyase 0.39 SMc03158 ABC transporter permease low > 103
Rhizobium sp. OAE497 0.57 ABIE40_RS03255 isocitrate lyase 0.39 ABIE40_RS23110 methionine ABC transporter permease low > 107
Agrobacterium fabrum C58 0.57 Atu0607 isocitrate lyase 0.43 Atu4488 ABC transporter permease low > 89
Azospirillum brasilense Sp245 0.56 AZOBR_RS02405 isocitrate lyase 0.42 AZOBR_RS19470 DL-methionine transporter permease subunit — —
Caulobacter crescentus NA1000 0.17 CCNA_01841 isocitrate lyase 0.32 CCNA_02750 ABC transporter permease protein low > 66
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_01841 isocitrate lyase 0.32 CCNA_02750 ABC transporter permease protein low > 67
Acinetobacter radioresistens SK82 0.16 MPMX26_02319 Isocitrate lyase 0.41 MPMX26_01860 Methionine import system permease protein MetP low > 36
Rhodopseudomonas palustris CGA009 0.15 TX73_022775 isocitrate lyase 0.42 TX73_007325 ABC transporter permease — —

Not shown: 10 genomes with orthologs for b4015 only; 8 genomes with orthologs for b0198 only