Conservation of cofitness between b2762 and b0072 in Escherichia coli BW25113

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2762 cysH phosphoadenosine phosphosulfate reductase (NCBI) 1.0 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.92 19
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00971 Phosphoadenosine phosphosulfate reductase 1.00 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15400 phosphoadenosine phosphosulfate reductase 1.00 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit low > 52
Escherichia coli BL21 1.00 ECD_02607 phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent 1.00 ECD_00074 3-isopropylmalate dehydratase large subunit
Escherichia coli ECOR38 1.00 HEPCGN_19085 cysH phosphoadenosine phosphosulfate reductase 1.00 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 85
Escherichia coli ECRC101 0.99 OKFHMN_20380 cysH phosphoadenosine phosphosulfate reductase 1.00 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC102 0.99 NIAGMN_18150 cysH phosphoadenosine phosphosulfate reductase 1.00 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR27 0.99 NOLOHH_12195 cysH phosphoadenosine phosphosulfate reductase 1.00 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 57
Escherichia coli ECRC98 0.99 JDDGAC_24045 cysH phosphoadenosine phosphosulfate reductase 1.00 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 0.99 MCAODC_10905 cysH phosphoadenosine phosphosulfate reductase 1.00 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC99 0.99 KEDOAH_07745 cysH phosphoadenosine phosphosulfate reductase 1.00 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC62 0.99 BNILDI_10745 cysH phosphoadenosine phosphosulfate reductase 1.00 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia fergusonii Becca 0.99 EFB2_01155 Phosphoadenosine phosphosulfate reductase 1.00 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Enterobacter asburiae PDN3 0.96 EX28DRAFT_2851 phosphoadenosine phosphosulfate reductase, thioredoxin dependent 0.95 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.55 57
Enterobacter sp. TBS_079 0.96 MPMX20_03641 Phosphoadenosine phosphosulfate reductase 0.94 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.69 28
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4818 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) 0.94 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Klebsiella michiganensis M5al 0.95 BWI76_RS22755 phosphoadenosine phosphosulfate reductase 0.95 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.77 33
Pantoea sp. MT58 0.85 IAI47_04160 phosphoadenylyl-sulfate reductase 0.87 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.95 4
Pectobacterium carotovorum WPP14 0.84 HER17_RS04245 phosphoadenylyl-sulfate reductase 0.86 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.92 19
Serratia liquefaciens MT49 0.83 IAI46_03695 phosphoadenylyl-sulfate reductase 0.86 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Erwinia tracheiphila SCR3 0.83 LU632_RS06410 phosphoadenylyl-sulfate reductase 0.79 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit 0.61 45
Rahnella sp. WP5 0.80 EX31_RS07895 phosphoadenylyl-sulfate reductase 0.87 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.95 17
Dickeya dadantii 3937 0.80 DDA3937_RS16935 phosphoadenylyl-sulfate reductase 0.85 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.72 22
Dickeya dianthicola ME23 0.79 DZA65_RS18080 phosphoadenylyl-sulfate reductase 0.85 DZA65_RS19210 3-isopropylmalate dehydratase large subunit low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS17005 phosphoadenylyl-sulfate reductase 0.85 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.57 32
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_02020 phosphoadenosine phosphosulfate reductase 0.80 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Shewanella amazonensis SB2B 0.64 Sama_2837 phosphoadenosine phosphosulfate reductase (RefSeq) 0.72 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.95 20
Alteromonas macleodii MIT1002 0.64 MIT1002_03378 Phosphoadenosine phosphosulfate reductase 0.69 MIT1002_00947 3-isopropylmalate dehydratase large subunit
Shewanella loihica PV-4 0.64 Shew_0667 phosphoadenosine phosphosulfate reductase (RefSeq) 0.71 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.88 10
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS00920 phosphoadenylyl-sulfate reductase 0.54 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Rhodanobacter denitrificans MT42 0.63 LRK55_RS00695 phosphoadenylyl-sulfate reductase 0.54 LRK55_RS07105 3-isopropylmalate dehydratase large subunit low > 63
Shewanella oneidensis MR-1 0.63 SO3736 cysH phosphoadenosine phosphosulfate reductase (NCBI ptt file) 0.73 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.85 14
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_05970 cysH phosphoadenylyl-sulfate reductase 0.49 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit low > 52
Shewanella sp. ANA-3 0.62 Shewana3_0857 phosphoadenosine phosphosulfate reductase (RefSeq) 0.73 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.90 29
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.1256.1 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) 0.63 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 74
Lysobacter sp. OAE881 0.60 ABIE51_RS15835 phosphoadenylyl-sulfate reductase 0.53 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.92 46
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS05895 phosphoadenylyl-sulfate reductase 0.51 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.97 8
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_2162 phosphoadenosine phosphosulfate reductase, thioredoxin dependent 0.63 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit low > 40
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_2506 par phosphoadenosine phosphosulfate reductase 0.51 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit
Pseudomonas sp. S08-1 0.23 OH686_01725 Phosphoadenylyl-sulfate reductase [thioredoxin] 0.63 OH686_04480 3-isopropylmalate dehydratase large subunit
Sinorhizobium meliloti 1021 0.23 SMc00092 phosphoadenosine phosphosulfate reductase 0.66 SMc03823 isopropylmalate isomerase large subunit 0.94 7
Rhizobium sp. OAE497 0.22 ABIE40_RS04475 phosphoadenylyl-sulfate reductase 0.64 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.89 9
Agrobacterium fabrum C58 0.21 Atu0818 phosphoadenosine phosphosulfate reductase 0.64 Atu2709 3-isopropylmalate dehydratase, large subunit 0.56 15
Azospirillum brasilense Sp245 0.21 AZOBR_RS10145 phosphoadenosine phosphosulfate reductase 0.67 AZOBR_RS03545 isopropylmalate isomerase
Azospirillum sp. SherDot2 0.21 MPMX19_00649 Phosphoadenosine phosphosulfate reductase 0.69 MPMX19_01998 3-isopropylmalate dehydratase large subunit 0.78 24
Caulobacter crescentus NA1000 0.20 CCNA_01179 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.88 37
Caulobacter crescentus NA1000 Δfur 0.20 CCNA_01179 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_0984 phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase 0.54 Echvi_2059 3-isopropylmalate dehydratase, large subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS04945 phosphoadenylyl-sulfate reductase 0.58 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_02550 phosphoadenosine phosphosulfate reductase 0.54 CA264_09435 3-isopropylmalate dehydratase large subunit
Magnetospirillum magneticum AMB-1 0.19 AMB_RS11190 phosphoadenylyl-sulfate reductase 0.65 AMB_RS20560 3-isopropylmalate dehydratase large subunit
Phaeobacter inhibens DSM 17395 0.18 PGA1_c20770 phosphoadenosine phosphosulfate reductase CysH 0.62 PGA1_c29780 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_00935 phosphoadenosine phosphosulfate reductase 0.61 AO353_20620 isopropylmalate isomerase
Pseudomonas sp. RS175 0.18 PFR28_02935 Phosphoadenosine phosphosulfate reductase 0.62 PFR28_02824 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS22740 phosphoadenylyl-sulfate reductase 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens SBW25 0.18 PFLU_RS22740 phosphoadenylyl-sulfate reductase 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_20830 phosphoadenosine phosphosulfate reductase 0.62 AO356_21400 isopropylmalate isomerase 0.57 52
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_6054 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) 0.62 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas simiae WCS417 0.17 PS417_21125 phosphoadenosine phosphosulfate reductase 0.61 PS417_18600 isopropylmalate isomerase 0.48 37
Castellaniella sp019104865 MT123 0.17 ABCV34_RS14110 phosphoadenylyl-sulfate reductase 0.62 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit low > 48
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_4125 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) 0.62 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.77 12
Pseudomonas putida KT2440 0.17 PP_2328 Phosphoadenosine phosphosulfate reductase 0.61 PP_1985 3-isopropylmalate dehydratase large subunit 0.70 8
Bosea sp. OAE506 0.17 ABIE41_RS15375 phosphoadenylyl-sulfate reductase 0.63 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.17 H281DRAFT_00116 phosphoadenylylsulfate reductase (thioredoxin) 0.62 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.55 17
Acinetobacter radioresistens SK82 0.17 MPMX26_00649 Phosphoadenosine phosphosulfate reductase 0.62 MPMX26_00345 3-isopropylmalate dehydratase large subunit low > 36
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS04110 phosphoadenosine phosphosulfate reductase 0.57 CA265_RS15830 3-isopropylmalate dehydratase large subunit 0.92 28
Burkholderia phytofirmans PsJN 0.17 BPHYT_RS04735 phosphoadenosine phosphosulfate reductase 0.62 BPHYT_RS33915 isopropylmalate isomerase
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS15560 phosphoadenosine phosphosulfate reductase 0.61 HSERO_RS16515 isopropylmalate isomerase 0.93 1
Paraburkholderia graminis OAS925 0.16 ABIE53_001228 phosphoadenosine phosphosulfate reductase 0.62 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.87 9
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS25245 phosphoadenylyl-sulfate reductase 0.62 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.76 41
Pseudomonas stutzeri RCH2 0.16 Psest_2328 phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase 0.63 Psest_2591 3-isopropylmalate dehydratase, large subunit

Not shown: 0 genomes with orthologs for b2762 only; 32 genomes with orthologs for b0072 only