Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2397.1 | | two-component system regulatory protein | insig. | 100 | 100 |
o | Lysobacter sp. OAE881 | ABIE51_RS10620 | | response regulator transcription factor | insig. | 61 | 95 |
| Lysobacter sp. OAE881 | ABIE51_RS10325 | | response regulator transcription factor | insig. | 57 | 94 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3917 | | two component transcriptional regulator, LuxR family | insig. | 55 | 95 |
| Lysobacter sp. OAE881 | ABIE51_RS10320 | | response regulator transcription factor | insig. | 50 | 98 |
| Lysobacter sp. OAE881 | ABIE51_RS02650 | | response regulator transcription factor | insig. | 47 | 95 |
| Lysobacter sp. OAE881 | ABIE51_RS14590 | | response regulator transcription factor | sig. | 44 | 92 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3859.1 | | Two-component system regulatory protein | sig. | 43 | 92 |
| Rhodanobacter denitrificans MT42 | LRK55_RS14195 | | response regulator transcription factor | no data | 41 | 94 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14480 | | response regulator transcription factor | strong | 41 | 94 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_03330 | citB | DNA-binding response regulator | cofit | 41 | 94 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21335 | | response regulator transcription factor | sig. | 42 | 94 |
| Pseudomonas sp. RS175 | PFR28_01868 | | Transcriptional regulatory protein DegU | no data | 40 | 97 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 37 | 100 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 37 | 100 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_22075 | | hypothetical protein | strong | 39 | 95 |
| Pseudomonas sp. RS175 | PFR28_01628 | | Nitrate/nitrite response regulator protein NarL | insig. | 40 | 93 |
o | Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 40 | 94 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS30910 | | response regulator transcription factor | insig. | 40 | 95 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5052 | | Two-component response regulator | no data | 37 | 94 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 37 | 96 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 37 | 96 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25185 | | hypothetical protein | sig. | 40 | 92 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_725 | | Nitrate/nitrite response regulator protein | strong | 40 | 92 |
| Pseudomonas simiae WCS417 | PS417_15740 | | hypothetical protein | insig. | 40 | 92 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1128 | | Two-component response regulator | insig. | 38 | 96 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_26265 | | LuxR family transcriptional regulator | no data | 36 | 97 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5741 | | Nitrate/nitrite response regulator protein | no data | 40 | 92 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS08905 | | XRE family transcriptional regulator | insig. | 39 | 94 |
| Pseudomonas fluorescens SBW25 | PFLU_RS14300 | | response regulator transcription factor | no data | 37 | 94 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS14300 | | response regulator transcription factor | sig. | 37 | 94 |
| Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 37 | 94 |
| Variovorax sp. OAS795 | ABID97_RS28185 | | response regulator transcription factor | insig. | 37 | 92 |
| Shewanella oneidensis MR-1 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 37 | 94 |
o | Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 37 | 96 |
| Rahnella sp. WP5 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 34 | 96 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_30010 | | transcriptional regulator | insig. | 38 | 89 |
| Shewanella loihica PV-4 | Shew_1824 | | response regulator (RefSeq) | no data | 36 | 94 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 34 | 96 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 34 | 96 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_02965 | | LuxR family transcriptional regulator | insig. | 35 | 95 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_19270 | | LuxR family transcriptional regulator | strong | 34 | 95 |
| Dickeya dianthicola 67-19 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 34 | 96 |
| Dickeya dianthicola ME23 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 34 | 96 |
| Dickeya dadantii 3937 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 34 | 96 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5823 | | Nitrate/nitrite response regulator protein | no data | 39 | 96 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 37 | 94 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 33 | 94 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1021 | | two component transcriptional regulator, LuxR family (RefSeq) | strong | 38 | 93 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2277 | | DNA-binding response regulator, LuxR family | insig. | 34 | 94 |
| Pseudomonas sp. RS175 | PFR28_01009 | | Transcriptional regulatory protein DegU | insig. | 34 | 95 |
| Serratia liquefaciens MT49 | IAI46_18680 | | two-component system response regulator NarL | insig. | 39 | 92 |
| Lysobacter sp. OAE881 | ABIE51_RS11810 | | response regulator | insig. | 36 | 94 |
| Shewanella amazonensis SB2B | Sama_1607 | | response regulator (RefSeq) | strong | 35 | 94 |
o | Rhizobium sp. OAE497 | ABIE40_RS23610 | | response regulator transcription factor | insig. | 41 | 88 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | strong | 36 | 95 |
| Erwinia tracheiphila SCR3 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 96 |
| Pectobacterium carotovorum WPP14 | HER17_RS09115 | | nitrate/nitrite response regulator protein NarP | insig. | 39 | 94 |
| Sinorhizobium meliloti 1021 | SM_b21520 | | two-component response regulator protein | insig. | 38 | 91 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4961.1 | | Two-component system regulatory protein | insig. | 40 | 94 |
| Escherichia fergusonii Becca | EFB2_01663 | | Nitrate/nitrite response regulator protein NarL | insig. | 37 | 94 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12820 | | nitrate/nitrite response regulator protein NarP | no data | 37 | 94 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS09580 | | response regulator transcription factor | insig. | 38 | 94 |
| Pseudomonas sp. RS175 | PFR28_01410 | | Response regulator GacA | strong | 38 | 94 |
| Escherichia coli BL21 | ECD_02120 | | response regulator in two-component regulatory system with NarQ | insig. | 37 | 94 |
| Escherichia coli ECOR27 | NOLOHH_14895 | narP | nitrate/nitrite response regulator protein NarP | cofit | 37 | 94 |
| Escherichia coli ECOR38 | HEPCGN_22585 | narP | nitrate/nitrite response regulator protein NarP | insig. | 37 | 94 |
| Escherichia coli ECRC100 | OKFHMN_23320 | narP | nitrate/nitrite response regulator protein NarP | cofit | 37 | 94 |
| Escherichia coli ECRC101 | MCAODC_14370 | narP | nitrate/nitrite response regulator protein NarP | insig. | 37 | 94 |
| Escherichia coli ECRC102 | NIAGMN_21085 | narP | nitrate/nitrite response regulator protein NarP | insig. | 37 | 94 |
| Escherichia coli ECRC62 | BNILDI_13815 | narP | nitrate/nitrite response regulator protein NarP | insig. | 37 | 94 |
| Escherichia coli ECRC98 | JDDGAC_27280 | narP | nitrate/nitrite response regulator protein NarP | cofit | 37 | 94 |
| Escherichia coli ECRC99 | KEDOAH_04865 | narP | nitrate/nitrite response regulator protein NarP | no data | 37 | 94 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01518 | | Nitrate/nitrite response regulator protein NarL | cofit | 37 | 94 |
o | Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 36 | 94 |
| Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 36 | 94 |
| Serratia liquefaciens MT49 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 34 | 96 |
| Pseudomonas fluorescens SBW25 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 94 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 94 |
o | Mycobacterium tuberculosis H37Rv | Rv0844c | | Possible nitrate/nitrite response transcriptional regulatory protein NarL | insig. | 38 | 94 |
| Pseudomonas fluorescens SBW25 | PFLU_RS11480 | | response regulator | insig. | 36 | 89 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS11480 | | response regulator | sig. | 36 | 89 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS34135 | | two-component system response regulator NarL | insig. | 36 | 94 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS08760 | | XRE family transcriptional regulator | no data | 35 | 93 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | insig. | 35 | 95 |
| Pseudomonas fluorescens SBW25 | PFLU_RS21600 | | response regulator transcription factor | insig. | 34 | 95 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS21600 | | response regulator transcription factor | sig. | 34 | 95 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 34 | 96 |
| Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 33 | 96 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1492 | | Nitrate/nitrite response regulator protein | no data | 38 | 95 |
| Rhodanobacter denitrificans MT42 | LRK55_RS02890 | | response regulator transcription factor | insig. | 38 | 94 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS03140 | | response regulator transcription factor | insig. | 38 | 94 |
| Escherichia coli BW25113 | b2193 | narP | DNA-binding response regulator in two-component regulatory system with NarQ or NarX (NCBI) | insig. | 37 | 94 |
| Marinobacter adhaerens HP15 | HP15_1567 | | two component transcriptional regulator, LuxR family | strong | 35 | 94 |
| Pseudomonas simiae WCS417 | PS417_19630 | | LuxR family transcriptional regulator | cofit | 34 | 95 |
o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS21030 | | hypothetical protein | insig. | 32 | 94 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_10010 | citB | DNA-binding response regulator | insig. | 38 | 94 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 34 | 94 |
| Shewanella sp. ANA-3 | Shewana3_1152 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 34 | 97 |
| Shewanella amazonensis SB2B | Sama_0646 | | response regulator receiver protein (RefSeq) | sig. | 33 | 94 |