Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Ralstonia solanacearum GMI1000 | RS_RS00100 | | DNA-binding response regulator | strong | 100 | 100 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS23850 | | DNA-binding response regulator | cofit | 95 | 100 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09500 | | DNA-binding response regulator | insig. | 95 | 100 |
o | Ralstonia solanacearum UW163 | UW163_RS04080 | | DNA-binding response regulator | insig. | 95 | 100 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS05230 | | response regulator transcription factor | insig. | 91 | 99 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS32890 | | response regulator transcription factor | insig. | 67 | 98 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03153 | | two component transcriptional regulator, LuxR family | insig. | 66 | 95 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS20525 | | LuxR family transcriptional regulator | cofit | 63 | 99 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS22230 | | LuxR family transcriptional regulator | sig. | 66 | 95 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS09785 | | LuxR family transcriptional regulator | sig. | 62 | 95 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1296 | | DNA-binding response regulator, LuxR family | strong | 49 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42420 | | response regulator transcription factor | insig. | 55 | 95 |
o | Variovorax sp. OAS795 | ABID97_RS22515 | | response regulator transcription factor | strong | 55 | 98 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 47 | 97 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3272 | | DNA-binding response regulator, LuxR family | insig. | 54 | 100 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_25670 | | regulator | sig. | 49 | 99 |
o | Pseudomonas sp. RS175 | PFR28_01618 | | Oxygen regulatory protein NreC | strong | 49 | 97 |
o | Variovorax sp. SCN45 | GFF5818 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 53 | 98 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 47 | 99 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_25245 | | regulator | strong | 47 | 99 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 44 | 99 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 43 | 99 |
o | Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 42 | 98 |
o | Agrobacterium fabrum C58 | Atu5267 | | two component response regulator | no data | 44 | 97 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 40 | 97 |
o | Shewanella amazonensis SB2B | Sama_1873 | | response regulator receiver protein (RefSeq) | insig. | 37 | 98 |
o | Alteromonas macleodii MIT1002 | MIT1002_03526 | | Nitrogen regulation protein C | insig. | 38 | 97 |
o | Pseudomonas stutzeri RCH2 | Psest_2048 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 41 | 97 |
| Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 41 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 38 | 99 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 41 | 99 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 35 | 94 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 37 | 95 |
| Pseudomonas sp. RS175 | PFR28_01009 | | Transcriptional regulatory protein DegU | insig. | 39 | 95 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_02965 | | LuxR family transcriptional regulator | insig. | 40 | 95 |
o | Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 40 | 95 |
| Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 40 | 99 |
| Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 39 | 97 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_19270 | | LuxR family transcriptional regulator | strong | 38 | 95 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2277 | | DNA-binding response regulator, LuxR family | insig. | 40 | 93 |
| Pseudomonas fluorescens SBW25 | PFLU_RS21600 | | response regulator transcription factor | insig. | 39 | 95 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS21600 | | response regulator transcription factor | sig. | 39 | 95 |
| Pseudomonas simiae WCS417 | PS417_19630 | | LuxR family transcriptional regulator | cofit | 39 | 95 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | insig. | 38 | 95 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS06015 | | hisitidine kinase | strong | 39 | 95 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1021 | | two component transcriptional regulator, LuxR family (RefSeq) | strong | 38 | 96 |
| Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 39 | 97 |
| Pseudomonas stutzeri RCH2 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 38 | 96 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 37 | 97 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 37 | 97 |
| Dickeya dianthicola ME23 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 97 |
| Dickeya dadantii 3937 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 38 | 97 |
| Dickeya dianthicola 67-19 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 38 | 97 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 36 | 97 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 37 | 97 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | strong | 37 | 97 |
| Enterobacter sp. TBS_079 | MPMX20_02839 | | Response regulator UvrY | strong | 37 | 97 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS18195 | | XRE family transcriptional regulator | insig. | 37 | 98 |
| Pseudomonas putida KT2440 | PP_2672 | | Transcriptional activator protein ExaE | strong | 37 | 98 |
| Pseudomonas fluorescens SBW25 | PFLU_RS14300 | | response regulator transcription factor | no data | 38 | 97 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS14300 | | response regulator transcription factor | sig. | 38 | 97 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | cofit | 37 | 97 |
| Pantoea sp. MT58 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 37 | 97 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5052 | | Two-component response regulator | no data | 38 | 97 |
| Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 37 | 97 |
| Dechlorosoma suillum PS | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 38 | 98 |
| Paraburkholderia graminis OAS925 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | strong | 35 | 97 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS16770 | | DNA-binding response regulator | insig. | 34 | 97 |
| Ralstonia solanacearum UW163 | UW163_RS18125 | | DNA-binding response regulator | insig. | 34 | 97 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_28065 | | LuxR family transcriptional regulator | strong | 38 | 98 |
| Magnetospirillum magneticum AMB-1 | AMB_RS18540 | | DNA-binding response regulator | cofit | 37 | 97 |
| Rahnella sp. WP5 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 36 | 97 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | strong | 36 | 97 |
| Escherichia coli ECOR27 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 97 |
| Escherichia coli ECRC62 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 35 | 97 |
| Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | sig. | 35 | 97 |
| Paraburkholderia graminis OAS925 | ABIE53_004143 | | DNA-binding NarL/FixJ family response regulator | sig. | 69 | 45 |
| Burkholderia phytofirmans PsJN | BPHYT_RS31295 | | LuxR family transcriptional regulator | insig. | 35 | 95 |
| Ralstonia solanacearum PSI07 | RPSI07_RS06675 | | DNA-binding response regulator | insig. | 34 | 97 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS36960 | | response regulator transcription factor | insig. | 35 | 95 |
o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS05670 | | response regulator transcription factor | strong | 39 | 96 |
| Pseudomonas sp. RS175 | PFR28_01811 | | Transcriptional activator protein ExaE | insig. | 37 | 98 |
| Pseudomonas simiae WCS417 | PS417_17470 | | LuxR family transcriptional regulator | insig. | 37 | 98 |
| Serratia liquefaciens MT49 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 36 | 97 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 36 | 97 |
| Erwinia tracheiphila SCR3 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 36 | 97 |
| Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 37 | 95 |
| Escherichia fergusonii Becca | EFB2_02032 | | Response regulator UvrY | cofit | 35 | 97 |
| Escherichia coli ECOR38 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | cofit | 35 | 97 |
| Escherichia coli ECRC101 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | insig. | 35 | 97 |
| Escherichia coli ECRC101 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | insig. | 35 | 97 |
| Escherichia coli ECRC102 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 97 |
| Escherichia coli ECRC98 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 97 |
| Escherichia coli ECRC99 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | no data | 35 | 97 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01815 | | Response regulator UvrY | insig. | 35 | 97 |
| Escherichia coli Nissle 1917 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | no data | 35 | 97 |
| Paraburkholderia graminis OAS925 | ABIE53_004144 | | DNA-binding NarL/FixJ family response regulator | sig. | 60 | 48 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3299 | | two component transcriptional regulator, LuxR family | sig. | 37 | 95 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3299 | | two component transcriptional regulator, LuxR family | insig. | 37 | 95 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1391 | | DNA-binding response regulator, LuxR family | strong | 37 | 98 |