Homologs of Psyr_2282 from Pseudomonas syringae pv. syringae B728a

Hydrophobe/amphiphile efflux-1 HAE1
SEED: RND efflux system, inner membrane transporter CmeB
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 strong 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 strong 100 100
o Pseudomonas putida KT2440 PP_2818 Multidrug efflux RND transporter MexD strong 76 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2954 RND efflux system, inner membrane transporter CmeB strong 64 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1661 RND efflux system, inner membrane transporter CmeB strong 64 97
o Pseudomonas fluorescens FW300-N2C3 AO356_28730 acriflavine resistance protein B strong 64 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4772 RND efflux system, inner membrane transporter CmeB strong 63 97
o Pseudomonas sp. RS175 PFR28_02463 Multidrug resistance protein MexB insig. 64 97
o Pseudomonas fluorescens FW300-N2E3 AO353_26845 acriflavine resistance protein B strong 63 97
o Pseudomonas fluorescens SBW25 PFLU_RS13280 multidrug efflux RND transporter permease subunit insig. 63 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13280 multidrug efflux RND transporter permease subunit sig. 63 97
  Pseudomonas sp. RS175 PFR28_02080 Multidrug resistance protein MexB insig. 62 98
o Pseudomonas simiae WCS417 PS417_12585 acriflavine resistance protein B strong 64 97
o Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 59 98
  Pseudomonas fluorescens SBW25 PFLU_RS15665 multidrug efflux RND transporter permease subunit insig. 61 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15665 multidrug efflux RND transporter permease subunit insig. 61 98
  Pseudomonas putida KT2440 PP_3456 Multidrug resistance protein MexB strong 63 97
o Ralstonia solanacearum PSI07 RPSI07_RS23905 hydrophobe/amphiphile efflux-1 family RND transporter strong 58 97
o Ralstonia solanacearum GMI1000 RS_RS00045 multidrug efflux RND transporter permease subunit strong 58 97
o Castellaniella sp019104865 MT123 ABCV34_RS04225 efflux RND transporter permease subunit strong 58 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09445 multidrug efflux RND transporter permease subunit strong 58 97
o Ralstonia solanacearum UW163 UW163_RS04135 multidrug efflux RND transporter permease subunit insig. 58 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS05315 efflux RND transporter permease subunit strong 59 97
o Sinorhizobium meliloti 1021 SMc02867 multidrug-efflux system transmembrane protein strong 57 99
o Dickeya dadantii 3937 DDA3937_RS07155 multidrug efflux RND transporter permease subunit insig. 57 96
o Agrobacterium fabrum C58 Atu3202 RND multidrug efflux transporter strong 59 97
o Rhodopseudomonas palustris CGA009 TX73_020235 efflux RND transporter permease subunit cofit 57 99
o Rhodospirillum rubrum S1H Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) insig. 56 100
  Herbaspirillum seropedicae SmR1 HSERO_RS19775 acriflavine resistance protein B strong 57 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3840 RND efflux system, inner membrane transporter CmeB insig. 57 99
o Dechlorosoma suillum PS Dsui_3182 hydrophobe/amphiphile efflux-1 (HAE1) family transporter no data 56 98
  Variovorax sp. OAS795 ABID97_RS00325 efflux RND transporter permease subunit strong 57 97
o Acidovorax sp. GW101-3H11 Ac3H11_4448 RND efflux system, inner membrane transporter CmeB strong 57 97
o Azospirillum brasilense Sp245 AZOBR_RS05000 acriflavine resistance protein B insig. 57 97
o Variovorax sp. SCN45 GFF3725 RND efflux system, inner membrane transporter insig. 57 97
  Ralstonia solanacearum GMI1000 RS_RS18645 multidrug efflux RND transporter permease subunit insig. 57 97
  Rhodopseudomonas palustris CGA009 TX73_007700 multidrug efflux RND transporter permease subunit insig. 53 100
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21905 hydrophobe/amphiphile efflux-1 family RND transporter insig. 57 97
  Cupriavidus basilensis FW507-4G11 RR42_RS20650 multidrug efflux RND transporter permease subunit strong 54 100
  Rhodopseudomonas palustris CGA009 TX73_014175 multidrug efflux RND transporter permease subunit insig. 55 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS02525 efflux RND transporter permease subunit strong 50 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS29865 efflux RND transporter permease subunit insig. 51 100
  Cupriavidus basilensis FW507-4G11 RR42_RS32420 multidrug efflux RND transporter permease subunit insig. 52 99
  Azospirillum sp. SherDot2 MPMX19_05884 Multidrug efflux pump subunit AcrB insig. 51 99
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 51 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04170 multidrug efflux pump strong 50 100
  Azospirillum brasilense Sp245 AZOBR_RS30185 multidrug transporter insig. 51 99
  Pectobacterium carotovorum WPP14 HER17_RS15740 multidrug efflux RND transporter permease subunit cofit 52 97
  Burkholderia phytofirmans PsJN BPHYT_RS16170 multidrug efflux RND transporter permease subunit no data 50 100
  Pseudomonas fluorescens FW300-N2E3 AO353_17295 multidrug transporter strong 51 99
  Serratia liquefaciens MT49 IAI46_18690 multidrug efflux RND transporter permease AcrD insig. 49 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB strong 51 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS09795 efflux RND transporter permease subunit insig. 52 97
  Pantoea sp. MT58 IAI47_05310 multidrug efflux RND transporter permease AcrD insig. 49 99
  Paraburkholderia graminis OAS925 ABIE53_003408 multidrug efflux pump strong 50 100
  Enterobacter asburiae PDN3 EX28DRAFT_3319 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 50 97
  Pseudomonas fluorescens FW300-N2C3 AO356_04880 multidrug transporter strong 51 99
  Shewanella oneidensis MR-1 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) strong 50 99
  Pseudomonas stutzeri RCH2 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 50 100
  Rahnella sp. WP5 EX31_RS22470 multidrug efflux RND transporter permease subunit cofit 50 97
  Enterobacter sp. TBS_079 MPMX20_04175 Multidrug export protein AcrF insig. 50 97
  Pectobacterium carotovorum WPP14 HER17_RS01560 multidrug efflux RND transporter permease AcrD cofit 50 97
  Enterobacter asburiae PDN3 EX28DRAFT_0191 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 49 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB strong 51 98
  Escherichia coli Nissle 1917 ECOLIN_RS02750 efflux RND transporter permease AcrB insig. 50 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4379 RND efflux system, inner membrane transporter CmeB sig. 50 97
  Enterobacter sp. TBS_079 MPMX20_03331 Multidrug efflux pump subunit AcrB insig. 49 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB strong 50 100
  Escherichia coli BL21 ECD_00413 multidrug efflux system protein strong 50 97
  Escherichia fergusonii Becca EFB2_03596 Multidrug efflux pump subunit AcrB insig. 50 97
  Escherichia coli ECOR27 NOLOHH_01140 acrB efflux RND transporter permease AcrB cofit 50 97
  Escherichia coli ECOR38 HEPCGN_06820 acrB efflux RND transporter permease AcrB strong 50 97
  Escherichia coli ECRC62 BNILDI_22555 acrB efflux RND transporter permease AcrB insig. 50 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03212 Multidrug efflux pump subunit AcrB cofit 50 97
  Escherichia coli BW25113 b0462 acrB multidrug efflux system protein (NCBI) strong 50 97
  Escherichia coli ECRC101 OKFHMN_08205 acrB efflux RND transporter permease AcrB insig. 50 97
  Escherichia coli ECRC101 MCAODC_27430 acrB efflux RND transporter permease AcrB insig. 50 97
  Escherichia coli ECRC102 NIAGMN_06260 acrB efflux RND transporter permease AcrB insig. 50 97
  Escherichia coli ECRC99 KEDOAH_19760 acrB efflux RND transporter permease AcrB no data 50 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1794.1 RND efflux system, inner membrane transporter CmeB insig. 50 100
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2116 RND efflux system, inner membrane transporter CmeB insig. 50 97
  Shewanella sp. ANA-3 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 50 98
  Enterobacter asburiae PDN3 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 50 97
  Klebsiella michiganensis M5al BWI76_RS06775 multidrug efflux RND transporter permease subunit strong 50 97
  Pseudomonas putida KT2440 PP_1385 Probable efflux pump membrane transporter TtgB strong 51 98
  Pseudomonas sp. RS175 PFR28_00631 putative efflux pump membrane transporter TtgB strong 50 99
  Dickeya dadantii 3937 DDA3937_RS05735 multidrug efflux RND transporter permease subunit strong 50 97
  Enterobacter sp. TBS_079 MPMX20_01064 Multidrug efflux pump subunit AcrB strong 50 97
  Klebsiella michiganensis M5al BWI76_RS25585 multidrug efflux RND transporter permease subunit insig. 49 97
  Escherichia coli BL21 ECD_02361 aminoglycoside/multidrug efflux system insig. 49 99
  Escherichia coli BW25113 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) strong 49 99
  Shewanella loihica PV-4 Shew_0032 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 50 97
  Shewanella amazonensis SB2B Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) strong 49 99
  Escherichia fergusonii Becca EFB2_01418 Multidrug efflux pump subunit AcrB insig. 48 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2188 RND efflux system, inner membrane transporter CmeB cofit 49 99
  Escherichia coli ECOR38 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD cofit 48 99
  Escherichia coli ECRC101 OKFHMN_21970 acrD multidrug efflux RND transporter permease AcrD insig. 48 99
  Escherichia coli ECRC101 MCAODC_12500 acrD multidrug efflux RND transporter permease AcrD insig. 48 99
  Escherichia coli ECRC102 NIAGMN_19740 acrD multidrug efflux RND transporter permease AcrD insig. 48 99
  Escherichia coli ECRC62 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD insig. 48 99