Homologs of Psyr_2243 from Pseudomonas syringae pv. syringae B728a

Endoribonuclease L-PSP
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_2243 Endoribonuclease L-PSP sig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2243 Endoribonuclease L-PSP insig. 100 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01492 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 73 100
o Pseudomonas simiae WCS417 PS417_07990 endoribonuclease L-PSP insig. 75 98
o Herbaspirillum seropedicae SmR1 HSERO_RS06570 endoribonuclease L-PSP insig. 47 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01079 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 38 96
  Ralstonia solanacearum GMI1000 RS_RS23495 RidA family protein no data 43 83
  Ralstonia solanacearum GMI1000 RS_RS23625 RidA family protein no data 43 83
o Rhodospirillum rubrum S1H Rru_A1711 Endoribonuclease L-PSP (NCBI) insig. 39 95
o Agrobacterium fabrum C58 Atu1475 hypothetical protein insig. 41 95
o Cupriavidus basilensis FW507-4G11 RR42_RS24575 endoribonuclease L-PSP insig. 38 94
o Rhodopseudomonas palustris CGA009 TX73_012895 RidA family protein insig. 41 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07135 RidA family protein cofit 38 95
o Enterobacter sp. TBS_079 MPMX20_02480 RutC family protein YjgH insig. 38 95
o Ralstonia solanacearum UW163 UW163_RS18330 RidA family protein insig. 41 83
o Acinetobacter baumannii LAC-4 RR41_RS04140 RidA family protein insig. 37 97
  Ralstonia solanacearum PSI07 RPSI07_RS14130 RidA family protein insig. 40 83
o Azospirillum brasilense Sp245 AZOBR_RS18540 endoribonuclease L-PSP no data 39 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2536 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein insig. 38 95
o Sinorhizobium meliloti 1021 SMa0089 hypothetical protein sig. 38 95
o Escherichia coli BL21 ECD_04115 UPF0131 family protein insig. 37 95
o Escherichia coli ECRC100 OKFHMN_11860 ridA Endoribonuclease L-PSP cofit 37 95
o Escherichia coli ECRC101 MCAODC_02365 ridA Endoribonuclease L-PSP insig. 37 95
o Escherichia coli ECRC102 NIAGMN_09710 ridA Endoribonuclease L-PSP cofit 37 95
o Escherichia coli ECRC98 JDDGAC_15500 ridA Endoribonuclease L-PSP insig. 37 95
o Escherichia coli ECRC99 KEDOAH_16295 ridA Endoribonuclease L-PSP no data 37 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03788 RutC family protein YjgH insig. 37 95
o Lysobacter sp. OAE881 ABIE51_RS10300 RidA family protein insig. 35 95
o Escherichia coli ECOR27 NOLOHH_04120 yjgH RutC family protein YjgH insig. 37 95
o Escherichia coli ECRC62 BNILDI_07390 yjgH RutC family protein YjgH insig. 37 95
o Escherichia coli BW25113 b4248 yjgH predicted mRNA endoribonuclease (NCBI) insig. 37 95
o Rhizobium sp. OAE497 ABIE40_RS04205 RidA family protein insig. 35 95
o Azospirillum sp. SherDot2 MPMX19_03734 RutC family protein YjgH insig. 35 95
  Enterobacter sp. TBS_079 MPMX20_01193 RutC family protein YjgH insig. 28 95
o Pseudomonas sp. RS175 PFR28_02561 RutC family protein YjgH insig. 35 95
o Variovorax sp. SCN45 GFF138 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein insig. 35 95
o Pseudomonas fluorescens FW300-N2C3 AO356_22385 enamine deaminase RidA insig. 35 95
o Bosea sp. OAE506 ABIE41_RS18885 RidA family protein insig. 36 95
o Paraburkholderia graminis OAS925 ABIE53_001473 enamine deaminase RidA (YjgF/YER057c/UK114 family) insig. 35 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_347 Endoribonuclease L-PSP insig. 34 95
o Variovorax sp. OAS795 ABID97_RS28685 RidA family protein insig. 34 95
o Pseudomonas stutzeri RCH2 Psest_3002 Putative translation initiation inhibitor, yjgF family insig. 33 95
o Pseudomonas sp. S08-1 OH686_18475 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein insig. 33 95
o Pseudomonas sp. DMC3 GFF2977 RutC family protein YjgH cofit 33 95
o Pseudomonas segetis P6 ACVTMO_RS20125 RidA family protein insig. 32 95
o Dechlorosoma suillum PS Dsui_3425 putative translation initiation inhibitor, yjgF family no data 35 95
o Enterobacter asburiae PDN3 EX28DRAFT_0570 Putative translation initiation inhibitor, yjgF family insig. 34 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4708.1 Putative translation initiation inhibitor, yjgF family insig. 34 95
o Klebsiella pneumoniae MKP103 KDGMDA_25720 RidA family protein sig. 33 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09760 RidA family protein insig. 35 95
o Klebsiella michiganensis M5al BWI76_RS18475 hypothetical protein insig. 33 95
o Pseudomonas aeruginosa MRSN321 DY961_RS28350 RidA family protein insig. 34 95
o Pseudomonas aeruginosa PA14 IKLFDK_21515 RidA family protein insig. 34 95
o Pseudomonas orientalis W4I3 QF045_RS20890 RidA family protein insig. 32 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2434 Putative translation initiation inhibitor, yjgF family insig. 31 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS16800 RidA family protein insig. 30 95
  Pseudomonas sp. BP01 JOY50_RS08980 RidA family protein cofit 35 81
  Pseudomonas segetis P6 ACVTMO_RS00185 RidA family protein strong 37 81
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 35 81
o Pseudomonas aeruginosa PUPa3 DQ20_RS49195 RidA family protein insig. 32 95
  Pseudomonas fluorescens SBW25 PFLU_RS29515 RidA family protein strong 33 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29515 RidA family protein strong 33 81
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00035 2-iminobutanoate/2-iminopropanoate deaminase strong 33 81
  Pseudomonas orientalis W4I3 QF045_RS02190 RidA family protein strong 33 81
  Pseudomonas simiae WCS417 PS417_27835 endoribonuclease strong 33 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 34 81
  Pseudomonas sp. S08-1 OH686_13545 RidA/YER057c/UK114 superfamily protein strong 34 71
  Pseudomonas sp. DMC3 GFF420 2-iminobutanoate/2-iminopropanoate deaminase strong 33 81
  Pseudomonas sp. RS175 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase strong 33 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 33 81
  Pseudomonas fluorescens FW300-N2C3 AO356_12475 reactive intermediate/imine deaminase strong 33 81
  Pseudomonas fluorescens FW300-N2C3 AO356_22550 hypothetical protein insig. 34 82
  Pseudomonas sp. SVBP6 COO64_RS01560 RidA family protein strong 33 81
  Pseudomonas fluorescens GW456-L13 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 33 81
  Pseudomonas fluorescens FW300-N2E3 AO353_09285 reactive intermediate/imine deaminase strong 33 81
  Shewanella oneidensis MR-1 SO0358 endoribonuclease L-PSP, putative (NCBI ptt file) strong 34 71
  Rhizobium sp. OAE497 ABIE40_RS29345 Rid family hydrolase insig. 30 82
  Shewanella sp. ANA-3 Shewana3_3813 putative endoribonuclease L-PSP (RefSeq) cofit 34 71
  Pseudomonas syringae pv. syringae B728a Psyr_0208 endoribonuclease L-PSP strong 32 81
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0208 endoribonuclease L-PSP strong 32 81
  Pseudomonas aeruginosa MRSN321 DY961_RS25225 RidA family protein insig. 35 79
  Pseudomonas aeruginosa PA14 IKLFDK_26470 enamine deaminase RidA sig. 35 79
  Pseudomonas aeruginosa PUPa3 DQ20_RS43535 RidA family protein insig. 35 79
  Dechlorosoma suillum PS Dsui_0312 endoribonuclease L-PSP, putative no data 31 81
  Pseudomonas aeruginosa MRSN321 DY961_RS12585 RidA family protein strong 30 81
  Pseudomonas aeruginosa PA14 IKLFDK_26760 reactive intermediate/imine deaminase strong 30 81
  Pseudomonas aeruginosa PUPa3 DQ20_RS49540 RidA family protein strong 30 81
  Cupriavidus basilensis FW507-4G11 RR42_RS05085 2-aminomuconate deaminase strong 29 84
  Pseudomonas orientalis W4I3 QF045_RS17680 RidA family protein insig. 35 79
  Klebsiella michiganensis M5al BWI76_RS12855 enamine deaminase RidA insig. 35 79
  Acinetobacter radioresistens SK82 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase strong 32 75
  Burkholderia phytofirmans PsJN BPHYT_RS11730 endoribonuclease no data 35 79
  Pseudomonas simiae WCS417 PS417_18945 endoribonuclease insig. 33 79
  Pseudomonas segetis P6 ACVTMO_RS22180 RidA family protein insig. 31 82
o Synechocystis sp000284455 PCC 6803 SGL_RS16000 RidA family protein insig. 24 96
  Pseudomonas sp. BP01 JOY50_RS07275 RidA family protein no data 35 79
  Pseudomonas fluorescens SBW25 PFLU_RS20985 RidA family protein insig. 33 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20985 RidA family protein insig. 33 79
  Pseudomonas sp. S08-1 OH686_23590 RidA/YER057c/UK114 superfamily protein insig. 30 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04942 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 36 79