Homologs of Psyr_2133 from Pseudomonas syringae pv. syringae B728a

Pseudouridine synthase
SEED: Similar to ribosomal large subunit pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas syringae pv. syringae B728a Psyr_2133 Pseudouridine synthase insig. 100 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2133 Pseudouridine synthase insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS08610 pseudouridine synthase cofit 79 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08610 pseudouridine synthase strong 79 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01863 hypothetical protein cofit 78 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2270 Similar to ribosomal large subunit pseudouridine synthase A insig. 78 95
o Pseudomonas simiae WCS417 PS417_08655 pseudouridine synthase insig. 77 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2426 Similar to ribosomal large subunit pseudouridine synthase A sig. 78 95
o Pseudomonas sp. DMC3 GFF4577 hypothetical protein insig. 77 95
o Pseudomonas fluorescens FW300-N2C3 AO356_03000 pseudouridine synthase insig. 78 95
o Pseudomonas sp. RS175 PFR28_01002 hypothetical protein sig. 78 95
o Pseudomonas fluorescens FW300-N2E3 AO353_19240 pseudouridine synthase sig. 78 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_239 Similar to ribosomal large subunit pseudouridine synthase A insig. 76 95
o Pseudomonas sp. BP01 JOY50_RS22025 pseudouridine synthase insig. 74 93
o Pseudomonas sp. SVBP6 COO64_RS05220 pseudouridine synthase insig. 74 95
o Pseudomonas putida KT2440 PP_2110 putative ribosomal large subunit pseudouridine synthase insig. 71 96
o Pseudomonas aeruginosa PA14 IKLFDK_09995 pseudouridine synthase insig. 67 95
o Rhodanobacter denitrificans MT42 LRK55_RS15670 RluA family pseudouridine synthase insig. 67 90
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15915 RluA family pseudouridine synthase insig. 67 90
o Pseudomonas stutzeri RCH2 Psest_3527 Pseudouridylate synthases, 23S RNA-specific insig. 64 93
o Pseudomonas sp. S08-1 OH686_18350 Pseudouridine synthase , type insig. 61 98
o Pseudomonas segetis P6 MPMX49_03789 hypothetical protein insig. 61 92
o Rhodanobacter sp. FW510-T8 OKGIIK_09070 Pseudouridine synthase insig. 64 96
o Lysobacter sp. OAE881 ABIE51_RS09995 pseudouridine synthase insig. 59 90
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5337.1 Similar to ribosomal large subunit pseudouridine synthase A insig. 58 89
o Acidovorax sp. GW101-3H11 Ac3H11_4190 Similar to ribosomal large subunit pseudouridine synthase A insig. 52 90
o Variovorax sp. SCN45 GFF1987 Pseudouridine synthase (EC 4.2.1.70), PA2043 type insig. 50 90
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5185 Similar to ribosomal large subunit pseudouridine synthase A insig. 49 91
o Variovorax sp. OAS795 ABID97_RS25165 pseudouridine synthase insig. 49 90
o Herbaspirillum seropedicae SmR1 HSERO_RS13490 pseudouridine synthase insig. 50 88
o Acinetobacter baumannii LAC-4 RR41_RS07060 pseudouridylate synthase insig. 43 90
o Acinetobacter radioresistens SK82 MPMX26_01205 hypothetical protein strong 42 89
o Kangiella aquimarina DSM 16071 B158DRAFT_1363 Pseudouridylate synthases, 23S RNA-specific insig. 42 88
o Shewanella amazonensis SB2B Sama_0506 pseudouridine synthase (RefSeq) insig. 41 91
o Shewanella loihica PV-4 Shew_3348 pseudouridine synthase (RefSeq) insig. 39 88
o Shewanella sp. ANA-3 Shewana3_3712 pseudouridine synthase (RefSeq) cofit 40 90
o Mycobacterium tuberculosis H37Rv Rv3300c Conserved hypothetical protein insig. 41 87
  Bifidobacterium breve UCC2003 BBR_RS13075 23S rRNA pseudouridylate synthase insig. 38 66
  Shewanella sp. ANA-3 Shewana3_1430 pseudouridine synthase (RefSeq) sig. 35 64
  Synechocystis sp000284455 PCC 6803 SGL_RS04000 RluA family pseudouridine synthase insig. 27 75
  Acidovorax sp. GW101-3H11 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 28 92
  Desulfovibrio vulgaris Hildenborough JW710 DVU1024 rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) insig. 29 90
  Acinetobacter radioresistens SK82 MPMX26_01026 Dual-specificity RNA pseudouridine synthase RluA cofit 31 65
  Shewanella loihica PV-4 Shew_1460 pseudouridine synthase (RefSeq) no data 32 53
  Vibrio cholerae E7946 ATCC 55056 CSW01_12700 RNA pseudouridine synthase insig. 31 62
  Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 27 86
  Dinoroseobacter shibae DFL-12 Dshi_3106 pseudouridine synthase (RefSeq) insig. 31 65
  Pseudomonas sp. SVBP6 COO64_RS11055 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 29 66
  Phaeobacter inhibens DSM 17395 PGA1_c33080 ribosomal large subunit pseudouridine synthase A sig. 33 64
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10060 RluA family pseudouridine synthase insig. 28 84
  Pseudomonas simiae WCS417 PS417_03820 ribosomal large subunit pseudouridine synthase D no data 28 65
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 27 85
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00969 Ribosomal large subunit pseudouridine synthase D cofit 28 66
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18680 pseudouridine synthase no data 32 63
  Phaeobacter inhibens DSM 17395 PGA1_c09000 ribosomal large subunit pseudouridine synthase D strong 26 66
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13190 RluA family pseudouridine synthase insig. 29 65
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3705 Pseudouridylate synthases, 23S RNA-specific insig. 31 54
  Pseudomonas aeruginosa PA14 IKLFDK_16600 RNA pseudouridine synthase insig. 29 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5127 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 28 66
  Pseudomonas stutzeri RCH2 Psest_0709 pseudouridine synthase, RluA family strong 25 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 27 85
  Pseudomonas sp. DMC3 GFF4004 Ribosomal large subunit pseudouridine synthase D cofit 29 66
  Variovorax sp. SCN45 GFF7036 LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) insig. 30 64
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04097 Dual-specificity RNA pseudouridine synthase RluA cofit 29 65
  Variovorax sp. SCN45 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 29 64
  Pseudomonas sp. S08-1 OH686_16410 LSU rRNA pseudouridine(1911/1915/1917) synthase cofit 30 53
  Acinetobacter radioresistens SK82 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C insig. 31 64
  Pseudomonas syringae pv. syringae B728a Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 28 65
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 28 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 28 66
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03255 pseudouridine synthase insig. 28 64
  Pseudomonas sp. RS175 PFR28_03748 Ribosomal large subunit pseudouridine synthase D strong 28 66
  Pseudomonas fluorescens FW300-N2C3 AO356_15925 ribosomal large subunit pseudouridine synthase D strong 28 66
  Pseudomonas simiae WCS417 PS417_19475 pseudouridine synthase sig. 29 65
  Pseudomonas fluorescens SBW25 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 28 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 28 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 28 66
  Pseudomonas syringae pv. syringae B728a Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 28 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 28 62
  Caulobacter crescentus NA1000 CCNA_00485 ribosomal large subunit pseudouridine synthase D strong 27 67
  Caulobacter crescentus NA1000 Δfur CCNA_00485 ribosomal large subunit pseudouridine synthase D cofit 27 67
  Agrobacterium fabrum C58 Atu4041 ribosomal large subunit pseudouridine synthase A sig. 34 53
  Bacteroides stercoris CC31F HMPREF1181_RS13725 RNA pseudouridine synthase insig. 31 63
  Acinetobacter baumannii LAC-4 RR41_RS16980 RluA family pseudouridine synthase sig. 30 69
  Bacteroides ovatus ATCC 8483 BACOVA_05306 pseudouridine synthase, RluA family insig. 29 63
  Acinetobacter baumannii LAC-4 RR41_RS05195 RluA family pseudouridine synthase insig. 27 65
  Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 31 65
  Pseudomonas fluorescens SBW25 PFLU_RS21445 RluA family pseudouridine synthase insig. 29 65
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21445 RluA family pseudouridine synthase sig. 29 65
  Rhodanobacter denitrificans MT42 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 28 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 28 87
  Pseudomonas segetis P6 MPMX49_03922 Ribosomal large subunit pseudouridine synthase D strong 26 73
  Pseudomonas fluorescens FW300-N2E3 AO353_14220 ribosomal large subunit pseudouridine synthase D strong 28 53
  Shewanella amazonensis SB2B Sama_0606 pseudouridylate synthase (RefSeq) sig. 29 65
  Pseudomonas aeruginosa PA14 IKLFDK_00810 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 28 86
  Pseudomonas sp. SVBP6 COO64_RS06925 RluA family pseudouridine synthase insig. 27 65
  Acidovorax sp. GW101-3H11 Ac3H11_174 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 32 66
  Pseudomonas aeruginosa PA14 IKLFDK_15135 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 28 84
  Shewanella loihica PV-4 Shew_0783 pseudouridylate synthase (RefSeq) no data 30 65
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 29 81