Homologs of Pf6N2E2_576 from Pseudomonas fluorescens FW300-N2E2

diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_576 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_24440 diguanylate cyclase insig. 96 99
o Pseudomonas sp. RS175 PFR28_02365 hypothetical protein insig. 88 100
o Pseudomonas sp. DMC3 GFF1013 hypothetical protein cofit 76 100
o Paraburkholderia graminis OAS925 ABIE53_003022 diguanylate cyclase (GGDEF)-like protein insig. 70 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04383 diguanylate cyclase with GAF sensor insig. 70 99
o Burkholderia phytofirmans PsJN BPHYT_RS14290 diguanylate cyclase insig. 70 100
o Cupriavidus basilensis FW507-4G11 RR42_RS29290 diguanylate cyclase insig. 66 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS25945 sensor domain-containing diguanylate cyclase insig. 63 100
o Herbaspirillum seropedicae SmR1 HSERO_RS18375 diguanylate cyclase sig. 56 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17930 sensor domain-containing diguanylate cyclase cofit 52 100
o Pantoea sp. MT58 IAI47_01420 sensor domain-containing diguanylate cyclase insig. 52 100
o Shewanella amazonensis SB2B Sama_1949 diguanylate cyclase, putative (RefSeq) insig. 54 99
o Shewanella oneidensis MR-1 SO3759 GGDEF domain protein (NCBI ptt file) insig. 48 98
o Shewanella sp. ANA-3 Shewana3_0833 diguanylate cyclase with GAF sensor (RefSeq) cofit 47 98
o Klebsiella pneumoniae MKP103 KDGMDA_25930 sensor domain-containing diguanylate cyclase sig. 48 96
o Klebsiella michiganensis M5al BWI76_RS13230 GGDEF domain-containing protein no data 47 97
o Enterobacter sp. TBS_079 MPMX20_02274 hypothetical protein sig. 45 99
  Klebsiella pneumoniae MKP103 KDGMDA_00790 sensor domain-containing diguanylate cyclase insig. 45 97
o Enterobacter asburiae PDN3 EX28DRAFT_1193 diguanylate cyclase (GGDEF) domain cofit 45 99
o Synechocystis sp000284455 PCC 6803 SGL_RS05600 diguanylate cyclase insig. 41 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4586 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no data 64 62
o Pseudomonas aeruginosa PUPa3 DQ20_RS32375 diguanylate cyclase sig. 41 100
o Pseudomonas aeruginosa MRSN321 DY961_RS03260 diguanylate cyclase strong 41 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS18625 sensor domain-containing diguanylate cyclase insig. 40 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3350 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 66 53
o Sphingobium sp. HT1-2 GFF3817 Multi-sensor hybrid histidine kinase insig. 43 78
o Pseudomonas putida KT2440 PP_2505 GAF domain/GGDEF domain protein insig. 39 98
o Pseudomonas sp. S08-1 OH686_07535 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 100
  Rhizobium sp. OAE497 ABIE40_RS08030 sensor domain-containing diguanylate cyclase insig. 35 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2240.1 Diguanylate cyclase (GGDEF domain) with GAF sensor insig. 39 83
  Synechocystis sp000284455 PCC 6803 SGL_RS05595 GAF domain-containing protein insig. 53 48
  Azospirillum sp. SherDot2 MPMX19_06088 Sensor histidine kinase RcsC insig. 57 48
  Azospirillum sp. SherDot2 MPMX19_04031 hypothetical protein insig. 50 63
  Alteromonas macleodii MIT1002 MIT1002_02990 Aerobic respiration control sensor protein ArcB cofit 53 48
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1772 FOG: GGDEF domain insig. 52 49
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01515 hypothetical protein insig. 51 46
  Pseudomonas stutzeri RCH2 Psest_4297 PAS domain S-box sig. 52 50
o Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 33 96
  Synechococcus elongatus PCC 7942 Synpcc7942_1643 diguanylate cyclase with GAF sensor insig. 51 47
  Xanthobacter sp. DMC5 GFF1211 hypothetical protein insig. 35 98
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00665 PAS domain-containing protein insig. 53 48
  Marinobacter adhaerens HP15 HP15_3728 sensory box/GGDEF/GAF/EAL domain protein insig. 51 47
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2395 FOG: GGDEF domain insig. 50 49
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2699 sensor histidine kinase insig. 47 54
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4719.1 Diguanylate cyclase (GGDEF domain) with GAF sensor insig. 53 49
o Lysobacter sp. OAE881 ABIE51_RS04020 sensor domain-containing diguanylate cyclase insig. 32 98
  Cellulophaga baltica 18 M666_RS10850 GAF domain-containing sensor histidine kinase insig. 46 48
  Herbaspirillum seropedicae SmR1 HSERO_RS06845 phosphodiesterase insig. 52 52
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00645 PAS domain-containing protein insig. 44 54
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3043.1 hypothetical protein insig. 55 45
  Pseudomonas syringae pv. syringae B728a Psyr_3060 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 48 53
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3060 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 48 53
  Alteromonas macleodii MIT1002 MIT1002_02202 Cyclic di-GMP phosphodiesterase Gmr insig. 48 49
  Shewanella amazonensis SB2B Sama_1202 GGDEF domain-containing protein (RefSeq) insig. 34 91
  Variovorax sp. SCN45 GFF1120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 54 42
  Pseudomonas fluorescens SBW25 PFLU_RS26810 GAF domain-containing protein insig. 48 54
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26810 GAF domain-containing protein insig. 48 54
o Sinorhizobium meliloti 1021 SM_b20389 hypothetical protein insig. 31 89
  Rahnella sp. WP5 EX31_RS13715 diguanylate cyclase insig. 48 48
  Bosea sp. OAE506 ABIE41_RS00530 GAF domain-containing protein insig. 51 44
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5385.1 FIG01211599: hypothetical protein insig. 49 47
  Xanthobacter sp. DMC5 GFF4573 hypothetical protein insig. 35 89
  Pseudomonas syringae pv. syringae B728a Psyr_3329 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 47 47
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3329 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 47 47
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1252.1 Sensor histidine kinase insig. 49 48
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.816.1 histidine kinase/response regulator hybrid protein insig. 47 48
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4828 Sensor histidine kinase insig. 32 87
  Pseudomonas syringae pv. syringae B728a Psyr_4221 diguanylate cyclase/phosphodiesterase insig. 42 53
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4221 diguanylate cyclase/phosphodiesterase insig. 42 53
  Rhizobium sp. OAE497 ABIE40_RS02550 sensor domain-containing diguanylate cyclase insig. 30 98
  Azospirillum sp. SherDot2 MPMX19_04032 hypothetical protein insig. 51 46
  Herbaspirillum seropedicae SmR1 HSERO_RS08510 phosphodiesterase insig. 46 52
  Pseudomonas fluorescens SBW25 PFLU_RS12290 GAF domain-containing protein insig. 48 47
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12290 GAF domain-containing protein insig. 48 47
  Alteromonas macleodii MIT1002 MIT1002_01327 putative periplasmic ligand-binding sensor domain protein insig. 49 46
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02694 DNA binding domain-containing protein, excisionase family sig. 46 46
  Pseudomonas aeruginosa PUPa3 DQ20_RS35680 sensor domain-containing phosphodiesterase insig. 41 55
  Pseudomonas aeruginosa MRSN321 DY961_RS04780 sensor domain-containing phosphodiesterase insig. 41 55
  Pantoea sp. MT58 IAI47_21810 EAL domain-containing protein insig. 43 49
  Rhizobium sp. OAE497 ABIE40_RS16800 GAF domain-containing protein insig. 43 51
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.812.1 histidine kinase-response regulator hybrid protein insig. 46 46
  Lysobacter sp. OAE881 ABIE51_RS08835 GAF domain-containing protein insig. 46 46
  Acidovorax sp. GW101-3H11 Ac3H11_4997 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 53
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12775 EAL domain-containing protein insig. 42 49
  Dickeya dianthicola 67-19 HGI48_RS11510 EAL domain-containing protein cofit 38 61
  Shewanella sp. ANA-3 Shewana3_4330 diguanylate cyclase with GAF sensor (RefSeq) insig. 31 90
  Dickeya dadantii 3937 DDA3937_RS11465 EAL domain-containing protein strong 38 61
  Xanthobacter sp. DMC5 GFF459 hypothetical protein insig. 44 47
  Caulobacter crescentus NA1000 CCNA_03066 GAF/PAS-family sensor histidine kinase insig. 44 46
  Caulobacter crescentus NA1000 Δfur CCNA_03066 GAF/PAS-family sensor histidine kinase cofit 44 46
o Shewanella loihica PV-4 Shew_3341 diguanylate cyclase with GAF sensor (RefSeq) insig. 29 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00329 DNA binding domain-containing protein, excisionase family insig. 46 46
  Dickeya dianthicola ME23 DZA65_RS11845 EAL domain-containing protein cofit 38 61
  Herbaspirillum seropedicae SmR1 HSERO_RS01405 diguanylate cyclase insig. 32 84
  Rhodopseudomonas palustris CGA009 TX73_020770 HWE histidine kinase domain-containing protein insig. 44 52
  Pseudomonas aeruginosa PA14 IKLFDK_12640 sensor domain-containing phosphodiesterase insig. 42 48
  Pectobacterium carotovorum WPP14 HER17_RS11575 EAL domain-containing protein cofit 38 57
  Dickeya dianthicola 67-19 HGI48_RS12245 diguanylate cyclase insig. 43 47
  Herbaspirillum seropedicae SmR1 HSERO_RS08430 diguanylate cyclase strong 45 41