Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pseudomonas putida KT2440 | PP_3592 | | Transcriptional regulator, RpiR family | strong | 100 | 100 |
o | Rhodanobacter denitrificans MT42 | LRK55_RS11800 | | MurR/RpiR family transcriptional regulator | cofit | 36 | 96 |
o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12065 | | MurR/RpiR family transcriptional regulator | strong | 36 | 90 |
o | Rahnella sp. WP5 | EX31_RS10250 | | MurR/RpiR family transcriptional regulator | insig. | 36 | 92 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS15565 | | MurR/RpiR family transcriptional regulator | strong | 33 | 91 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS24260 | | RpiR family transcriptional regulator | insig. | 32 | 91 |
o | Paraburkholderia graminis OAS925 | ABIE53_004340 | | DNA-binding MurR/RpiR family transcriptional regulator | insig. | 33 | 91 |
o | Serratia liquefaciens MT49 | IAI46_12015 | | MurR/RpiR family transcriptional regulator | insig. | 34 | 91 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06098 | | transcriptional regulator, RpiR family | insig. | 32 | 91 |
o | Enterobacter sp. TBS_079 | MPMX20_02354 | | hypothetical protein | insig. | 30 | 89 |
o | Enterobacter asburiae PDN3 | EX28DRAFT_1118 | | transcriptional regulator, RpiR family | insig. | 31 | 88 |
o | Rhizobium sp. OAE497 | ABIE40_RS16980 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 85 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS26840 | | DNA-binding protein | strong | 23 | 82 |
| Serratia liquefaciens MT49 | IAI46_12855 | | MurR/RpiR family transcriptional regulator | insig. | 22 | 78 |
o | Sinorhizobium meliloti 1021 | SMc02353 | | hypothetical protein | insig. | 22 | 91 |
| Agrobacterium fabrum C58 | Atu2145 | | transcriptional regulator, RpiR family | sig. | 22 | 90 |
o | Variovorax sp. SCN45 | GFF6654 | | Transcriptional regulator, RpiR family | insig. | 23 | 86 |
| Ralstonia solanacearum PSI07 | RPSI07_RS14095 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 77 |
| Sinorhizobium meliloti 1021 | SMc01602 | | hypothetical protein | insig. | 25 | 77 |
o | Alteromonas macleodii MIT1002 | MIT1002_01597 | | putative DNA-binding transcriptional regulator | cofit | 23 | 88 |
| Rhizobium sp. OAE497 | ABIE40_RS20155 | | MurR/RpiR family transcriptional regulator | cofit | 22 | 82 |
| Ralstonia solanacearum GMI1000 | RS_RS08795 | | MurR/RpiR family transcriptional regulator | sig. | 27 | 79 |
o | Castellaniella sp019104865 MT123 | ABCV34_RS13380 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 81 |
| Agrobacterium fabrum C58 | Atu4454 | | RpiR family transcriptional regulator | insig. | 25 | 80 |
o | Pantoea sp. MT58 | IAI47_15275 | | MurR/RpiR family transcriptional regulator HpxU | insig. | 23 | 90 |
| Rahnella sp. WP5 | EX31_RS07425 | | MurR/RpiR family transcriptional regulator | insig. | 20 | 84 |
| Azospirillum sp. SherDot2 | MPMX19_04844 | | HTH-type transcriptional regulator HexR | insig. | 26 | 82 |
| Serratia liquefaciens MT49 | IAI46_24010 | | MurR/RpiR family transcriptional regulator | insig. | 22 | 74 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c27130 | | putative HTH-type transcriptional regulator | strong | 23 | 81 |
| Pectobacterium carotovorum WPP14 | HER17_RS14445 | | MurR/RpiR family transcriptional regulator | cofit | 22 | 84 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS17530 | | RpiR family transcriptional regulator | strong | 26 | 79 |
| Rhizobium sp. OAE497 | ABIE40_RS12055 | | MurR/RpiR family transcriptional regulator | sig. | 22 | 84 |
| Dickeya dadantii 3937 | DDA3937_RS03665 | | MurR/RpiR family transcriptional regulator | sig. | 22 | 76 |
o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5851 | | Transcriptional regulator, RpiR family | insig. | 24 | 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF883 | | Predicted transcriptional regulator of the myo-inositol catabolic operon | strong | 22 | 64 |
| Dickeya dianthicola 67-19 | HGI48_RS03725 | | SIS domain-containing protein | sig. | 23 | 64 |
| Dickeya dianthicola ME23 | DZA65_RS03850 | | MurR/RpiR family transcriptional regulator | insig. | 22 | 64 |
| Pantoea sp. MT58 | IAI47_01475 | | MurR/RpiR family transcriptional regulator | strong | 22 | 69 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26180 | | hypothetical protein | insig. | 21 | 87 |
| Burkholderia phytofirmans PsJN | BPHYT_RS15550 | | transcriptional regulator | sig. | 23 | 93 |
| Erwinia tracheiphila SCR3 | LU632_RS02360 | | MurR/RpiR family transcriptional regulator | insig. | 21 | 69 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS16875 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 84 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02617 | | transcriptional regulator, RpiR family | insig. | 24 | 83 |
| Azospirillum brasilense Sp245 | AZOBR_RS30190 | | transcriptional regulator | insig. | 24 | 83 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_27890 | | RpiR family transcriptional regulator | strong | 24 | 90 |
| Klebsiella michiganensis M5al | BWI76_RS18110 | | transcriptional regulator HexR | sig. | 23 | 68 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS33775 | | MurR/RpiR family transcriptional regulator | strong | 25 | 79 |
| Bosea sp. OAE506 | ABIE41_RS16720 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 81 |
| Klebsiella michiganensis M5al | BWI76_RS03080 | | (Fe-S)-cluster assembly protein | strong | 23 | 61 |
| Pantoea sp. MT58 | IAI47_03370 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 84 |
| Paraburkholderia graminis OAS925 | ABIE53_005821 | | DNA-binding MurR/RpiR family transcriptional regulator | strong | 24 | 80 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0146 | | transcriptional regulator, RpiR family | insig. | 20 | 84 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS06120 | | transcriptional regulator | sig. | 24 | 70 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS17585 | | DNA-binding protein | no data | 22 | 82 |
| Dickeya dianthicola 67-19 | HGI48_RS16735 | | SIS domain-containing protein | cofit | 22 | 88 |
| Klebsiella michiganensis M5al | BWI76_RS14460 | | MurR/RpiR family transcriptional regulator | strong | 26 | 64 |
| Fusobacterium nucleatum SB010 | HUW76_09985 | | MurR/RpiR family transcriptional regulator | cofit | 20 | 78 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05904 | | transcriptional regulator, RpiR family | no data | 24 | 82 |
| Serratia liquefaciens MT49 | IAI46_04245 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 69 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0703 | | transcriptional regulator, RpiR family | insig. | 25 | 68 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_08905 | | MurR/RpiR family transcriptional regulator | insig. | 36 | 22 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04279 | | transcriptional regulator, RpiR family | sig. | 23 | 86 |
| Enterobacter sp. TBS_079 | MPMX20_02758 | | HTH-type transcriptional regulator HexR | strong | 24 | 68 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1959 | | Transcriptional regulator, RpiR family | insig. | 23 | 71 |
| Enterobacter sp. TBS_079 | MPMX20_01667 | | hypothetical protein | sig. | 21 | 91 |
| Burkholderia phytofirmans PsJN | BPHYT_RS27175 | | DNA-binding protein | insig. | 24 | 82 |
| Rahnella sp. WP5 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | sig. | 22 | 68 |
| Enterobacter sp. TBS_079 | MPMX20_03376 | | HTH-type transcriptional regulator MurR | strong | 19 | 84 |
| Burkholderia phytofirmans PsJN | BPHYT_RS16740 | | transcriptional regulator | strong | 23 | 81 |
| Agrobacterium fabrum C58 | Atu4514 | | RpiR family transcriptional regulator | strong | 22 | 81 |
| Pectobacterium carotovorum WPP14 | HER17_RS04535 | | MurR/RpiR family transcriptional regulator | insig. | 20 | 89 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2175 | | Transcriptional regulator, RpiR family | strong | 24 | 85 |
| Dickeya dianthicola ME23 | DZA65_RS17825 | | MurR/RpiR family transcriptional regulator | insig. | 21 | 88 |
| Sinorhizobium meliloti 1021 | SMc01164 | | hypothetical protein | strong | 30 | 27 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS26925 | | MurR/RpiR family transcriptional regulator | sig. | 26 | 50 |
| Variovorax sp. OAS795 | ABID97_RS15420 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 82 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | sig. | 32 | 25 |
| Azospirillum sp. SherDot2 | MPMX19_06075 | | HTH-type transcriptional regulator HexR | no data | 25 | 80 |
| Rhizobium sp. OAE497 | ABIE40_RS21085 | | MurR/RpiR family transcriptional regulator | strong | 24 | 74 |
| Escherichia fergusonii Becca | EFB2_00784 | | hypothetical protein | insig. | 23 | 69 |
| Escherichia coli ECRC101 | OKFHMN_18860 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 23 | 69 |
| Escherichia coli ECRC101 | MCAODC_09375 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 23 | 69 |
| Escherichia coli ECRC102 | NIAGMN_16625 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 23 | 69 |
| Escherichia coli ECRC98 | JDDGAC_22495 | rpiR | MurR/RpiR family transcriptional regulator | no data | 23 | 69 |
| Escherichia coli ECRC99 | KEDOAH_09285 | rpiR | MurR/RpiR family transcriptional regulator | no data | 23 | 69 |
| Pseudomonas sp. S08-1 | OH686_23395 | | hypothetical protein | strong | 23 | 87 |
| Shewanella loihica PV-4 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 22 | 68 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2466 | | Sialic acid utilization regulator, RpiR family | insig. | 39 | 21 |
| Escherichia coli Nissle 1917 | ECOLIN_RS17460 | | MurR/RpiR family transcriptional regulator | cofit | 23 | 69 |
| Ralstonia solanacearum GMI1000 | RS_RS06905 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 87 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03750 | | transcriptional regulator, RpiR family | insig. | 25 | 83 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2055 | | Probable transcriptional regulator | strong | 23 | 67 |
| Caulobacter crescentus NA1000 | CCNA_01355 | | transcriptional regulator IolR | strong | 19 | 69 |
| Caulobacter crescentus NA1000 Δfur | CCNA_01355 | | transcriptional regulator IolR | cofit | 19 | 69 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | strong | 32 | 25 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3062 | | transcriptional regulator, RpiR family | insig. | 24 | 69 |
| Rhizobium sp. OAE497 | ABIE40_RS05995 | | MurR/RpiR family transcriptional regulator | strong | 23 | 64 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1364 | | Phosphogluconate repressor HexR, RpiR family | insig. | 21 | 82 |
| Klebsiella michiganensis M5al | BWI76_RS00065 | | MurR/RpiR family transcriptional regulator | strong | 23 | 63 |
| Ralstonia solanacearum PSI07 | RPSI07_RS17960 | | MurR/RpiR family transcriptional regulator | insig. | 22 | 68 |