Homologs of PP_3592 from Pseudomonas putida KT2440

Transcriptional regulator, RpiR family
SEED: Transcriptional regulators

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_3592 Transcriptional regulator, RpiR family strong 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS11800 MurR/RpiR family transcriptional regulator cofit 36 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS12065 MurR/RpiR family transcriptional regulator strong 36 90
o Rahnella sp. WP5 EX31_RS10250 MurR/RpiR family transcriptional regulator insig. 36 92
o Paraburkholderia sabiae LMG 24235 QEN71_RS15565 MurR/RpiR family transcriptional regulator strong 33 91
o Burkholderia phytofirmans PsJN BPHYT_RS24260 RpiR family transcriptional regulator insig. 32 91
o Paraburkholderia graminis OAS925 ABIE53_004340 DNA-binding MurR/RpiR family transcriptional regulator insig. 33 91
o Serratia liquefaciens MT49 IAI46_12015 MurR/RpiR family transcriptional regulator insig. 34 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06098 transcriptional regulator, RpiR family insig. 32 91
o Enterobacter sp. TBS_079 MPMX20_02354 hypothetical protein insig. 30 89
o Enterobacter asburiae PDN3 EX28DRAFT_1118 transcriptional regulator, RpiR family insig. 31 88
o Rhizobium sp. OAE497 ABIE40_RS16980 MurR/RpiR family transcriptional regulator insig. 26 85
o Cupriavidus basilensis FW507-4G11 RR42_RS26840 DNA-binding protein strong 23 82
  Serratia liquefaciens MT49 IAI46_12855 MurR/RpiR family transcriptional regulator insig. 22 78
o Sinorhizobium meliloti 1021 SMc02353 hypothetical protein insig. 22 91
  Agrobacterium fabrum C58 Atu2145 transcriptional regulator, RpiR family sig. 22 90
o Variovorax sp. SCN45 GFF6654 Transcriptional regulator, RpiR family insig. 23 86
  Ralstonia solanacearum PSI07 RPSI07_RS14095 MurR/RpiR family transcriptional regulator insig. 27 77
  Sinorhizobium meliloti 1021 SMc01602 hypothetical protein insig. 25 77
o Alteromonas macleodii MIT1002 MIT1002_01597 putative DNA-binding transcriptional regulator cofit 23 88
  Rhizobium sp. OAE497 ABIE40_RS20155 MurR/RpiR family transcriptional regulator cofit 22 82
  Ralstonia solanacearum GMI1000 RS_RS08795 MurR/RpiR family transcriptional regulator sig. 27 79
o Castellaniella sp019104865 MT123 ABCV34_RS13380 MurR/RpiR family transcriptional regulator insig. 23 81
  Agrobacterium fabrum C58 Atu4454 RpiR family transcriptional regulator insig. 25 80
o Pantoea sp. MT58 IAI47_15275 MurR/RpiR family transcriptional regulator HpxU insig. 23 90
  Rahnella sp. WP5 EX31_RS07425 MurR/RpiR family transcriptional regulator insig. 20 84
  Azospirillum sp. SherDot2 MPMX19_04844 HTH-type transcriptional regulator HexR insig. 26 82
  Serratia liquefaciens MT49 IAI46_24010 MurR/RpiR family transcriptional regulator insig. 22 74
o Phaeobacter inhibens DSM 17395 PGA1_c27130 putative HTH-type transcriptional regulator strong 23 81
  Pectobacterium carotovorum WPP14 HER17_RS14445 MurR/RpiR family transcriptional regulator cofit 22 84
  Herbaspirillum seropedicae SmR1 HSERO_RS17530 RpiR family transcriptional regulator strong 26 79
  Rhizobium sp. OAE497 ABIE40_RS12055 MurR/RpiR family transcriptional regulator sig. 22 84
  Dickeya dadantii 3937 DDA3937_RS03665 MurR/RpiR family transcriptional regulator sig. 22 76
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5851 Transcriptional regulator, RpiR family insig. 24 85
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF883 Predicted transcriptional regulator of the myo-inositol catabolic operon strong 22 64
  Dickeya dianthicola 67-19 HGI48_RS03725 SIS domain-containing protein sig. 23 64
  Dickeya dianthicola ME23 DZA65_RS03850 MurR/RpiR family transcriptional regulator insig. 22 64
  Pantoea sp. MT58 IAI47_01475 MurR/RpiR family transcriptional regulator strong 22 69
  Cupriavidus basilensis FW507-4G11 RR42_RS26180 hypothetical protein insig. 21 87
  Burkholderia phytofirmans PsJN BPHYT_RS15550 transcriptional regulator sig. 23 93
  Erwinia tracheiphila SCR3 LU632_RS02360 MurR/RpiR family transcriptional regulator insig. 21 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS16875 MurR/RpiR family transcriptional regulator insig. 24 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02617 transcriptional regulator, RpiR family insig. 24 83
  Azospirillum brasilense Sp245 AZOBR_RS30190 transcriptional regulator insig. 24 83
  Pseudomonas fluorescens FW300-N2E3 AO353_27890 RpiR family transcriptional regulator strong 24 90
  Klebsiella michiganensis M5al BWI76_RS18110 transcriptional regulator HexR sig. 23 68
  Paraburkholderia sabiae LMG 24235 QEN71_RS33775 MurR/RpiR family transcriptional regulator strong 25 79
  Bosea sp. OAE506 ABIE41_RS16720 MurR/RpiR family transcriptional regulator insig. 24 81
  Klebsiella michiganensis M5al BWI76_RS03080 (Fe-S)-cluster assembly protein strong 23 61
  Pantoea sp. MT58 IAI47_03370 MurR/RpiR family transcriptional regulator insig. 24 84
  Paraburkholderia graminis OAS925 ABIE53_005821 DNA-binding MurR/RpiR family transcriptional regulator strong 24 80
  Enterobacter asburiae PDN3 EX28DRAFT_0146 transcriptional regulator, RpiR family insig. 20 84
  Cupriavidus basilensis FW507-4G11 RR42_RS06120 transcriptional regulator sig. 24 70
  Herbaspirillum seropedicae SmR1 HSERO_RS17585 DNA-binding protein no data 22 82
  Dickeya dianthicola 67-19 HGI48_RS16735 SIS domain-containing protein cofit 22 88
  Klebsiella michiganensis M5al BWI76_RS14460 MurR/RpiR family transcriptional regulator strong 26 64
  Fusobacterium nucleatum SB010 HUW76_09985 MurR/RpiR family transcriptional regulator cofit 20 78
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05904 transcriptional regulator, RpiR family no data 24 82
  Serratia liquefaciens MT49 IAI46_04245 MurR/RpiR family transcriptional regulator insig. 23 69
  Enterobacter asburiae PDN3 EX28DRAFT_0703 transcriptional regulator, RpiR family insig. 25 68
  Vibrio cholerae E7946 ATCC 55056 CSW01_08905 MurR/RpiR family transcriptional regulator insig. 36 22
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04279 transcriptional regulator, RpiR family sig. 23 86
  Enterobacter sp. TBS_079 MPMX20_02758 HTH-type transcriptional regulator HexR strong 24 68
  Acidovorax sp. GW101-3H11 Ac3H11_1959 Transcriptional regulator, RpiR family insig. 23 71
  Enterobacter sp. TBS_079 MPMX20_01667 hypothetical protein sig. 21 91
  Burkholderia phytofirmans PsJN BPHYT_RS27175 DNA-binding protein insig. 24 82
  Rahnella sp. WP5 EX31_RS10635 MurR/RpiR family transcriptional regulator sig. 22 68
  Enterobacter sp. TBS_079 MPMX20_03376 HTH-type transcriptional regulator MurR strong 19 84
  Burkholderia phytofirmans PsJN BPHYT_RS16740 transcriptional regulator strong 23 81
  Agrobacterium fabrum C58 Atu4514 RpiR family transcriptional regulator strong 22 81
  Pectobacterium carotovorum WPP14 HER17_RS04535 MurR/RpiR family transcriptional regulator insig. 20 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2175 Transcriptional regulator, RpiR family strong 24 85
  Dickeya dianthicola ME23 DZA65_RS17825 MurR/RpiR family transcriptional regulator insig. 21 88
  Sinorhizobium meliloti 1021 SMc01164 hypothetical protein strong 30 27
  Paraburkholderia sabiae LMG 24235 QEN71_RS26925 MurR/RpiR family transcriptional regulator sig. 26 50
  Variovorax sp. OAS795 ABID97_RS15420 MurR/RpiR family transcriptional regulator insig. 24 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family sig. 32 25
  Azospirillum sp. SherDot2 MPMX19_06075 HTH-type transcriptional regulator HexR no data 25 80
  Rhizobium sp. OAE497 ABIE40_RS21085 MurR/RpiR family transcriptional regulator strong 24 74
  Escherichia fergusonii Becca EFB2_00784 hypothetical protein insig. 23 69
  Escherichia coli ECRC101 OKFHMN_18860 rpiR MurR/RpiR family transcriptional regulator insig. 23 69
  Escherichia coli ECRC101 MCAODC_09375 rpiR MurR/RpiR family transcriptional regulator insig. 23 69
  Escherichia coli ECRC102 NIAGMN_16625 rpiR MurR/RpiR family transcriptional regulator insig. 23 69
  Escherichia coli ECRC98 JDDGAC_22495 rpiR MurR/RpiR family transcriptional regulator no data 23 69
  Escherichia coli ECRC99 KEDOAH_09285 rpiR MurR/RpiR family transcriptional regulator no data 23 69
  Pseudomonas sp. S08-1 OH686_23395 hypothetical protein strong 23 87
  Shewanella loihica PV-4 Shew_2049 DNA-binding transcriptional regulator HexR (RefSeq) strong 22 68
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2466 Sialic acid utilization regulator, RpiR family insig. 39 21
  Escherichia coli Nissle 1917 ECOLIN_RS17460 MurR/RpiR family transcriptional regulator cofit 23 69
  Ralstonia solanacearum GMI1000 RS_RS06905 MurR/RpiR family transcriptional regulator insig. 23 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03750 transcriptional regulator, RpiR family insig. 25 83
  Acidovorax sp. GW101-3H11 Ac3H11_2055 Probable transcriptional regulator strong 23 67
  Caulobacter crescentus NA1000 CCNA_01355 transcriptional regulator IolR strong 19 69
  Caulobacter crescentus NA1000 Δfur CCNA_01355 transcriptional regulator IolR cofit 19 69
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_590 Phosphogluconate repressor HexR, RpiR family strong 32 25
  Enterobacter asburiae PDN3 EX28DRAFT_3062 transcriptional regulator, RpiR family insig. 24 69
  Rhizobium sp. OAE497 ABIE40_RS05995 MurR/RpiR family transcriptional regulator strong 23 64
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1364 Phosphogluconate repressor HexR, RpiR family insig. 21 82
  Klebsiella michiganensis M5al BWI76_RS00065 MurR/RpiR family transcriptional regulator strong 23 63
  Ralstonia solanacearum PSI07 RPSI07_RS17960 MurR/RpiR family transcriptional regulator insig. 22 68