| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas putida KT2440 | PP_3592 | | Transcriptional regulator, RpiR family | strong | 100 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS07380 | | MurR/RpiR family transcriptional regulator | insig. | 97 | 94 |
| o | Pseudomonas sp. SVBP6 | COO64_RS14535 | | MurR/RpiR family transcriptional regulator | insig. | 79 | 94 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS11800 | | MurR/RpiR family transcriptional regulator | cofit | 36 | 96 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12065 | | MurR/RpiR family transcriptional regulator | strong | 36 | 90 |
| o | Rahnella sp. WP5 | EX31_RS10250 | | MurR/RpiR family transcriptional regulator | insig. | 36 | 92 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS15565 | | MurR/RpiR family transcriptional regulator | strong | 33 | 91 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS24260 | | RpiR family transcriptional regulator | insig. | 32 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_004340 | | DNA-binding MurR/RpiR family transcriptional regulator | insig. | 33 | 91 |
| | Serratia liquefaciens MT49 | IAI46_12015 | | MurR/RpiR family transcriptional regulator | insig. | 34 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06098 | | transcriptional regulator, RpiR family | insig. | 32 | 91 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02401 | | hypothetical protein | cofit | 31 | 88 |
| | Enterobacter sp. TBS_079 | MPMX20_02354 | | hypothetical protein | insig. | 30 | 89 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1118 | | transcriptional regulator, RpiR family | insig. | 31 | 88 |
| | Pseudomonas segetis P6 | ACVTMO_RS19695 | | MurR/RpiR family transcriptional regulator | cofit | 28 | 86 |
| | Rhizobium sp. OAE497 | ABIE40_RS16980 | | MurR/RpiR family transcriptional regulator | insig. | 26 | 85 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25830 | qapR;inference=COORDINATES | transcriptional repressor QapR | strong | 26 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58260 | qapR;inference=COORDINATES | transcriptional repressor QapR | strong | 26 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25880 | | transcriptional repressor QapR | strong | 26 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26840 | | DNA-binding protein | strong | 23 | 82 |
| | Serratia liquefaciens MT49 | IAI46_12855 | | MurR/RpiR family transcriptional regulator | insig. | 22 | 78 |
| | Sinorhizobium meliloti 1021 | SMc02353 | | hypothetical protein | insig. | 22 | 91 |
| | Agrobacterium fabrum C58 | Atu2145 | | transcriptional regulator, RpiR family | sig. | 22 | 90 |
| | Variovorax sp. SCN45 | GFF6654 | | Transcriptional regulator, RpiR family | insig. | 23 | 86 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS14095 | | MurR/RpiR family transcriptional regulator | insig. | 27 | 77 |
| | Sinorhizobium meliloti 1021 | SMc01602 | | hypothetical protein | insig. | 25 | 77 |
| | Alteromonas macleodii MIT1002 | MIT1002_01597 | | putative DNA-binding transcriptional regulator | cofit | 23 | 88 |
| | Rhizobium sp. OAE497 | ABIE40_RS20155 | | MurR/RpiR family transcriptional regulator | cofit | 22 | 82 |
| | Ralstonia solanacearum GMI1000 | RS_RS08795 | | MurR/RpiR family transcriptional regulator | sig. | 27 | 79 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS13380 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 81 |
| | Agrobacterium fabrum C58 | Atu4454 | | RpiR family transcriptional regulator | insig. | 25 | 80 |
| | Pantoea sp. MT58 | IAI47_15275 | | MurR/RpiR family transcriptional regulator HpxU | insig. | 23 | 90 |
| | Rahnella sp. WP5 | EX31_RS07425 | | MurR/RpiR family transcriptional regulator | insig. | 20 | 84 |
| | Serratia liquefaciens MT49 | IAI46_24010 | | MurR/RpiR family transcriptional regulator | strong | 22 | 74 |
| | Azospirillum sp. SherDot2 | MPMX19_04844 | | HTH-type transcriptional regulator HexR | insig. | 26 | 82 |
| | Pseudomonas sp. DMC3 | GFF992 | | hypothetical protein | cofit | 25 | 85 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS09880 | | MurR/RpiR family transcriptional regulator HpxU | cofit | 24 | 91 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c27130 | | putative HTH-type transcriptional regulator | strong | 23 | 81 |
| | Pectobacterium carotovorum WPP14 | HER17_RS14445 | | MurR/RpiR family transcriptional regulator | cofit | 22 | 84 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS17530 | | RpiR family transcriptional regulator | strong | 26 | 79 |
| | Rhizobium sp. OAE497 | ABIE40_RS12055 | | MurR/RpiR family transcriptional regulator | sig. | 22 | 84 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS17985 | | MurR/RpiR family transcriptional regulator | strong | 23 | 69 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5851 | | Transcriptional regulator, RpiR family | insig. | 24 | 85 |
| | Dickeya dadantii 3937 | DDA3937_RS03665 | | MurR/RpiR family transcriptional regulator | sig. | 22 | 76 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF883 | | Predicted transcriptional regulator of the myo-inositol catabolic operon | strong | 22 | 64 |
| | Dickeya dianthicola 67-19 | HGI48_RS03725 | | SIS domain-containing protein | sig. | 23 | 64 |
| | Dickeya dianthicola ME23 | DZA65_RS03850 | | MurR/RpiR family transcriptional regulator | insig. | 22 | 64 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26180 | | hypothetical protein | insig. | 21 | 87 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS15550 | | transcriptional regulator | sig. | 23 | 93 |
| | Pantoea sp. MT58 | IAI47_01475 | | MurR/RpiR family transcriptional regulator | strong | 22 | 69 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_06545 | rpiR | MurR/RpiR family transcriptional regulator | sig. | 21 | 69 |
| | Erwinia tracheiphila SCR3 | LU632_RS02360 | | MurR/RpiR family transcriptional regulator | insig. | 21 | 69 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS16875 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 84 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02617 | | transcriptional regulator, RpiR family | insig. | 24 | 83 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30190 | | transcriptional regulator | insig. | 24 | 83 |
| | Erwinia amylovora T8 | OLJFJH_04440 | | MurR/RpiR family transcriptional regulator | strong | 21 | 69 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_27890 | | RpiR family transcriptional regulator | strong | 24 | 90 |
| | Klebsiella michiganensis M5al | BWI76_RS18110 | | transcriptional regulator HexR | sig. | 23 | 68 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33775 | | MurR/RpiR family transcriptional regulator | strong | 25 | 79 |
| | Bosea sp. OAE506 | ABIE41_RS16720 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 81 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS07690 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 68 |
| | Klebsiella michiganensis M5al | BWI76_RS03080 | | (Fe-S)-cluster assembly protein | strong | 23 | 61 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_25375 | | transcriptional regulator HexR | insig. | 23 | 68 |
| | Pantoea sp. MT58 | IAI47_03370 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 84 |
| | Paraburkholderia graminis OAS925 | ABIE53_005821 | | DNA-binding MurR/RpiR family transcriptional regulator | strong | 24 | 80 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0146 | | transcriptional regulator, RpiR family | insig. | 20 | 84 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS06120 | | transcriptional regulator | sig. | 24 | 70 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS17585 | | DNA-binding protein | no data | 22 | 82 |
| | Dickeya dianthicola 67-19 | HGI48_RS16735 | | SIS domain-containing protein | cofit | 22 | 88 |
| | Klebsiella michiganensis M5al | BWI76_RS14460 | | MurR/RpiR family transcriptional regulator | strong | 26 | 64 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_11575 | | MurR/RpiR family transcriptional regulator | sig. | 22 | 61 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS20540 | | MurR/RpiR family transcriptional regulator | strong | 22 | 61 |
| | Fusobacterium nucleatum SB010 | HUW76_09985 | | MurR/RpiR family transcriptional regulator | cofit | 20 | 78 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0703 | | transcriptional regulator, RpiR family | insig. | 25 | 68 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05904 | | transcriptional regulator, RpiR family | no data | 24 | 82 |
| | Serratia liquefaciens MT49 | IAI46_04245 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 69 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04279 | | transcriptional regulator, RpiR family | sig. | 23 | 86 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_08905 | | MurR/RpiR family transcriptional regulator | insig. | 36 | 22 |
| | Enterobacter sp. TBS_079 | MPMX20_02758 | | HTH-type transcriptional regulator HexR | strong | 24 | 68 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1959 | | Transcriptional regulator, RpiR family | insig. | 23 | 71 |
| | Enterobacter sp. TBS_079 | MPMX20_01667 | | hypothetical protein | sig. | 21 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS27175 | | DNA-binding protein | insig. | 24 | 82 |
| | Rahnella sp. WP5 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | sig. | 22 | 68 |
| | Enterobacter sp. TBS_079 | MPMX20_03376 | | HTH-type transcriptional regulator MurR | strong | 19 | 84 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25475 | hexR;go_function=DNA-binding | transcriptional regulator HexR | sig. | 22 | 86 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26230 | | transcriptional regulator | strong | 22 | 86 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS57925 | hexR;go_function=DNA-binding | transcriptional regulator HexR | strong | 22 | 86 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_28415 | | MurR/RpiR family transcriptional regulator | insig. | 39 | 21 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS04755 | | MurR/RpiR family transcriptional regulator | insig. | 39 | 21 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2175 | | Transcriptional regulator, RpiR family | strong | 24 | 85 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16740 | | transcriptional regulator | strong | 23 | 81 |
| | Agrobacterium fabrum C58 | Atu4514 | | RpiR family transcriptional regulator | strong | 22 | 81 |
| | Dickeya dianthicola ME23 | DZA65_RS17825 | | MurR/RpiR family transcriptional regulator | insig. | 21 | 88 |
| | Pectobacterium carotovorum WPP14 | HER17_RS04535 | | MurR/RpiR family transcriptional regulator | insig. | 20 | 89 |
| | Sinorhizobium meliloti 1021 | SMc01164 | | hypothetical protein | strong | 30 | 27 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS26925 | | MurR/RpiR family transcriptional regulator | sig. | 26 | 50 |
| | Variovorax sp. OAS795 | ABID97_RS15420 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 82 |
| | Pseudomonas orientalis W4I3 | QF045_RS24250 | | MurR/RpiR family transcriptional regulator | insig. | 34 | 27 |
| | Azospirillum sp. SherDot2 | MPMX19_06075 | | HTH-type transcriptional regulator HexR | no data | 25 | 80 |
| | Escherichia coli ECRC100 | OKFHMN_18860 | rpiR | MurR/RpiR family transcriptional regulator | cofit | 23 | 69 |
| | Escherichia coli ECRC101 | MCAODC_09375 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 23 | 69 |
| | Escherichia coli ECRC102 | NIAGMN_16625 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 23 | 69 |
| | Escherichia coli ECRC98 | JDDGAC_22495 | rpiR | MurR/RpiR family transcriptional regulator | insig. | 23 | 69 |
| | Escherichia coli ECRC99 | KEDOAH_09285 | rpiR | MurR/RpiR family transcriptional regulator | no data | 23 | 69 |
| | Pseudomonas sp. S08-1 | OH686_23395 | | hypothetical protein | strong | 23 | 87 |
| | Shewanella loihica PV-4 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | strong | 22 | 68 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | sig. | 32 | 25 |
| | Rhizobium sp. OAE497 | ABIE40_RS21085 | | MurR/RpiR family transcriptional regulator | strong | 24 | 74 |
| | Escherichia fergusonii Becca | EFB2_00784 | | hypothetical protein | insig. | 23 | 69 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2466 | | Sialic acid utilization regulator, RpiR family | insig. | 39 | 21 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS17460 | | MurR/RpiR family transcriptional regulator | cofit | 23 | 69 |
| | Ralstonia solanacearum GMI1000 | RS_RS06905 | | MurR/RpiR family transcriptional regulator | insig. | 23 | 87 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03750 | | transcriptional regulator, RpiR family | insig. | 25 | 83 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2055 | | Probable transcriptional regulator | strong | 23 | 67 |
| | Caulobacter crescentus NA1000 | CCNA_01355 | | transcriptional regulator IolR | strong | 19 | 69 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01355 | | transcriptional regulator IolR | cofit | 19 | 69 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | strong | 32 | 25 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3062 | | transcriptional regulator, RpiR family | insig. | 24 | 69 |
| | Klebsiella michiganensis M5al | BWI76_RS00065 | | MurR/RpiR family transcriptional regulator | strong | 23 | 63 |
| | Rhizobium sp. OAE497 | ABIE40_RS05995 | | MurR/RpiR family transcriptional regulator | strong | 23 | 64 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1364 | | Phosphogluconate repressor HexR, RpiR family | insig. | 21 | 82 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS17960 | | MurR/RpiR family transcriptional regulator | insig. | 22 | 68 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00230 | | MurR/RpiR family transcriptional regulator | insig. | 24 | 69 |
| | Ralstonia solanacearum UW163 | UW163_RS13560 | | MurR/RpiR family transcriptional regulator | no data | 24 | 69 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02611 | | transcriptional regulator, RpiR family | strong | 25 | 80 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_01500 | | RpiR family transcriptional regulator | strong | 24 | 85 |
| | Lysobacter sp. OAE881 | ABIE51_RS13700 | | MurR/RpiR family transcriptional regulator | sig. | 36 | 26 |
| | Pseudomonas sp. RS175 | PFR28_00572 | | HTH-type transcriptional regulator HexR | strong | 30 | 28 |
| | Dickeya dadantii 3937 | DDA3937_RS16665 | | MurR/RpiR family transcriptional regulator | sig. | 23 | 88 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS09180 | | transcriptional regulator | insig. | 21 | 85 |
| | Escherichia coli BL21 | ECD_02455 | | putative DNA-binding transcriptional regulator | insig. | 34 | 24 |
| | Escherichia coli ECOR27 | NOLOHH_13125 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 34 | 24 |
| | Escherichia coli ECRC100 | OKFHMN_21450 | yfhH | MurR/RpiR family transcriptional regulator | cofit | 34 | 24 |
| | Escherichia coli ECRC101 | MCAODC_11980 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 34 | 24 |
| | Escherichia coli ECRC102 | NIAGMN_19220 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 34 | 24 |
| | Escherichia coli ECRC62 | BNILDI_11925 | yfhH | MurR/RpiR family transcriptional regulator | cofit | 34 | 24 |
| | Escherichia coli ECRC98 | JDDGAC_25115 | yfhH | MurR/RpiR family transcriptional regulator | insig. | 34 | 24 |
| | Escherichia coli ECRC99 | KEDOAH_06770 | yfhH | MurR/RpiR family transcriptional regulator | no data | 34 | 24 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01146 | | HTH-type transcriptional regulator MurR | insig. | 34 | 24 |
| | Escherichia coli BW25113 | b2561 | yfhH | orf, hypothetical protein (VIMSS) | insig. | 34 | 24 |
| | Rahnella sp. WP5 | EX31_RS21125 | | MurR/RpiR family transcriptional regulator | insig. | 20 | 69 |