Homologs of PP_3467 from Pseudomonas putida KT2440

Sigma-54 dependent transcriptional regulator
SEED: sigma-54 dependent transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_3467 Sigma-54 dependent transcriptional regulator strong 100 100
o Pseudomonas fluorescens FW300-N2E3 AO353_19490 Fis family transcriptional regulator insig. 65 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2355 sigma-54 dependent transcriptional regulator insig. 64 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_175 sigma-54 dependent transcriptional regulator insig. 64 99
o Paraburkholderia graminis OAS925 ABIE53_004383 transcriptional regulator of acetoin/glycerol metabolism strong 43 89
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00325 GAF modulated sigma54 specific transcriptional regulator, Fis family insig. 43 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS30230 sigma-54-dependent Fis family transcriptional regulator insig. 41 89
o Dechlorosoma suillum PS Dsui_1463 transcriptional activator of acetoin/glycerol metabolism cofit 42 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS15930 sigma-54-dependent Fis family transcriptional regulator strong 37 94
o Herbaspirillum seropedicae SmR1 HSERO_RS09475 Fis family transcriptional regulator sig. 38 94
  Rhodospirillum rubrum S1H Rru_A0932 Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains (NCBI) cofit 40 97
  Cupriavidus basilensis FW507-4G11 RR42_RS11445 Fis family transcriptional regulator sig. 39 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5398 Nitrogen regulation protein NR(I) strong 38 94
o Variovorax sp. OAS795 ABID97_RS15005 sigma-54-dependent Fis family transcriptional regulator insig. 37 90
  Cupriavidus basilensis FW507-4G11 RR42_RS34270 Fis family transcriptional regulator insig. 40 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS12445 sigma-54-dependent Fis family transcriptional regulator cofit 40 89
  Burkholderia phytofirmans PsJN BPHYT_RS28085 Fis family transcriptional regulator insig. 40 89
o Acidovorax sp. GW101-3H11 Ac3H11_4391 Transcriptional activator of acetoin/glycerol metabolism sig. 40 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01211 Transcriptional regulator of acetoin/glycerol metabolism insig. 39 89
  Paraburkholderia graminis OAS925 ABIE53_005725 transcriptional regulator of acetoin/glycerol metabolism strong 39 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS34130 sigma-54-dependent Fis family transcriptional regulator insig. 38 93
  Ralstonia solanacearum PSI07 RPSI07_RS09460 sigma-54-dependent Fis family transcriptional regulator insig. 42 85
  Pseudomonas sp. RS175 PFR28_03884 Acetoin catabolism regulatory protein insig. 41 94
  Pseudomonas fluorescens SBW25 PFLU_RS26740 sigma-54-dependent Fis family transcriptional regulator insig. 41 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26740 sigma-54-dependent Fis family transcriptional regulator strong 41 94
  Pseudomonas simiae WCS417 PS417_24805 Fis family transcriptional regulator strong 41 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4981 Nitrogen regulation protein NR(I) insig. 40 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1343 Nitrogen regulation protein NR(I) insig. 41 90
  Shewanella sp. ANA-3 Shewana3_0251 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) cofit 38 93
  Pseudomonas stutzeri RCH2 Psest_2888 Transcriptional activator of acetoin/glycerol metabolism insig. 40 94
  Pseudomonas fluorescens SBW25 PFLU_RS18275 sigma-54-dependent Fis family transcriptional regulator insig. 38 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18275 sigma-54-dependent Fis family transcriptional regulator insig. 38 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07820 sigma-54-dependent Fis family transcriptional regulator insig. 43 85
  Pseudomonas simiae WCS417 PS417_16245 Fis family transcriptional regulator insig. 38 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_663 Transcriptional activator of acetoin dehydrogenase operon AcoR insig. 40 99
  Pseudomonas fluorescens FW300-N2E3 AO353_06555 Fis family transcriptional regulator insig. 40 85
  Pseudomonas fluorescens FW300-N2C3 AO356_15230 Fis family transcriptional regulator insig. 40 94
  Pseudomonas fluorescens FW300-N2E3 AO353_25170 Fis family transcriptional regulator insig. 39 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1750 Sigma-54 dependent transcriptional regulator insig. 43 80
  Pseudomonas fluorescens FW300-N2C3 AO356_24870 Fis family transcriptional regulator insig. 39 99
  Ralstonia solanacearum GMI1000 RS_RS15720 sigma-54-dependent Fis family transcriptional regulator insig. 42 85
  Pseudomonas sp. RS175 PFR28_01767 Acetoin catabolism regulatory protein insig. 39 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2675 Nitrogen regulation protein NR(I) insig. 40 90
  Pseudomonas sp. S08-1 OH686_03705 sigma-54-dependent transcriptional regulator insig. 35 94
  Pseudomonas putida KT2440 PP_0546 sigma-54 dependent transcriptional regulator sig. 37 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.877.1 hypothetical protein insig. 40 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS32795 sigma-54-dependent Fis family transcriptional regulator insig. 39 80
  Shewanella oneidensis MR-1 SO4479 sigma-54 dependent transcriptional regulator (NCBI ptt file) insig. 37 93
o Klebsiella michiganensis M5al BWI76_RS21990 ATPase AAA strong 40 84
  Variovorax sp. OAS795 ABID97_RS12605 sigma-54-dependent Fis family transcriptional regulator sig. 38 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4007 sigma-54 dependent transcriptional regulator insig. 37 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2611 sigma-54 dependent transcriptional regulator insig. 36 94
  Pseudomonas simiae WCS417 PS417_11760 Fis family transcriptional regulator insig. 39 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01307 Transcriptional regulator of acetoin/glycerol metabolism insig. 39 80
  Rhodopseudomonas palustris CGA009 TX73_006200 sigma-54-dependent Fis family transcriptional regulator insig. 38 96
  Pseudomonas fluorescens FW300-N2C3 AO356_21605 Fis family transcriptional regulator insig. 36 94
  Marinobacter adhaerens HP15 HP15_2165 sigma-54 dependent transcriptional regulator insig. 36 94
  Variovorax sp. SCN45 GFF6444 no description insig. 37 99
  Paraburkholderia graminis OAS925 ABIE53_005506 transcriptional regulator of acetoin/glycerol metabolism strong 40 80
  Cupriavidus basilensis FW507-4G11 RR42_RS09410 hypothetical protein insig. 36 93
  Shewanella loihica PV-4 Shew_3573 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) insig. 38 93
  Pseudomonas sp. RS175 PFR28_02793 Acetoin catabolism regulatory protein insig. 36 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS14145 sigma-54-dependent Fis family transcriptional regulator insig. 37 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_102 sigma-54 dependent transcriptional regulator insig. 36 94
  Pseudomonas stutzeri RCH2 Psest_1432 Transcriptional activator of acetoin/glycerol metabolism insig. 38 97
  Pseudomonas putida KT2440 PP_0557 Acetoin catabolism regulatory protein strong 39 94
  Burkholderia phytofirmans PsJN BPHYT_RS29370 Fis family transcriptional regulator insig. 36 97
  Pseudomonas syringae pv. syringae B728a Psyr_1736 Helix-turn-helix, Fis-type insig. 36 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1736 Helix-turn-helix, Fis-type insig. 36 94
o Serratia liquefaciens MT49 IAI46_12320 sigma-54-dependent Fis family transcriptional regulator insig. 39 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_09115 sigma-54-dependent Fis family transcriptional regulator cofit 34 93
  Pseudomonas putida KT2440 PP_2259 putative sigma-54 dependent transcriptional regulator insig. 35 94
  Castellaniella sp019104865 MT123 ABCV34_RS02700 sigma-54-dependent Fis family transcriptional regulator insig. 38 89
  Variovorax sp. SCN45 GFF3390 Transcriptional activator of acetoin dehydrogenase operon AcoR insig. 39 84
  Cupriavidus basilensis FW507-4G11 RR42_RS28905 Fis family transcriptional regulator insig. 35 95
  Shewanella amazonensis SB2B Sama_3434 sigma-54 dependent transcriptional regulator (RefSeq) cofit 37 93
  Klebsiella michiganensis M5al BWI76_RS10230 AAA family ATPase no data 34 96
  Azospirillum sp. SherDot2 MPMX19_01661 Acetoin catabolism regulatory protein insig. 33 94
  Cupriavidus basilensis FW507-4G11 RR42_RS25420 Fis family transcriptional regulator insig. 33 94
  Sinorhizobium meliloti 1021 SM_b20102 acetoin catabolism regulatory protein insig. 35 95
  Agrobacterium fabrum C58 Atu4741 transcriptional regulator insig. 37 86
  Azospirillum brasilense Sp245 AZOBR_RS04785 ATPase AAA insig. 34 94
  Cupriavidus basilensis FW507-4G11 RR42_RS21715 ATPase AAA insig. 36 85
  Herbaspirillum seropedicae SmR1 HSERO_RS19015 Fis family transcriptional regulator insig. 44 50
  Pantoea sp. MT58 IAI47_19790 sigma-54-dependent Fis family transcriptional regulator insig. 33 96
  Serratia liquefaciens MT49 IAI46_12235 sigma 54-interacting transcriptional regulator insig. 33 96
  Pseudomonas fluorescens FW300-N2C3 AO356_29210 AAA family ATPase insig. 35 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1790 Sigma-54 dependent transcriptional regulator insig. 35 95
  Azospirillum brasilense Sp245 AZOBR_RS21185 Fis family transcriptional regulator insig. 46 47
  Pseudomonas sp. S08-1 OH686_00830 Transcriptional regulator cofit 50 45
  Desulfovibrio vulgaris Miyazaki F DvMF_1933 PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) insig. 47 43
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02891 transcriptional regulator, propionate catabolism operon regulatory protein sig. 47 47
  Alteromonas macleodii MIT1002 MIT1002_03048 Transcriptional regulatory protein ZraR insig. 42 47
  Pseudomonas putida KT2440 PP_2790 Sigma-54 dependent sensory box protein strong 44 47
  Burkholderia phytofirmans PsJN BPHYT_RS26850 ATPase AAA strong 45 47
  Cupriavidus basilensis FW507-4G11 RR42_RS11255 Fis family transcriptional regulator strong 44 50
  Pseudomonas simiae WCS417 PS417_11085 ATPase AAA insig. 34 96
  Pseudomonas fluorescens SBW25 PFLU_RS11715 sigma-54-dependent Fis family transcriptional regulator insig. 34 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11715 sigma-54-dependent Fis family transcriptional regulator insig. 34 96
  Ralstonia sp. UNC404CL21Col ABZR87_RS16750 propionate catabolism operon regulatory protein PrpR strong 45 47