Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Azospirillum sp. SherDot2 | MPMX19_00609 | | Chemotaxis protein CheY | insig. | 100 | 100 |
| Azospirillum sp. SherDot2 | MPMX19_04342 | | Chemotaxis protein CheY | no data | 49 | 84 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_00320 | | chemotaxis protein CheY | no data | 40 | 81 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_60 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 39 | 81 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4011 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 39 | 81 |
| Pseudomonas simiae WCS417 | PS417_07720 | | chemotaxis protein CheY | no data | 40 | 81 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0806 | | chemotaxis protein CheY, putative (TIGR) | strong | 43 | 80 |
| Pseudomonas fluorescens SBW25 | PFLU_RS07795 | | SpoIIE family protein phosphatase | no data | 39 | 81 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS07795 | | SpoIIE family protein phosphatase | no data | 39 | 81 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_02185 | | chemotaxis protein CheY | no data | 38 | 81 |
| Pseudomonas sp. SVBP6 | COO64_RS09545 | rssB | two-component system response regulator RssB | no data | 39 | 81 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2841 | | response regulator receiver protein (RefSeq) | strong | 44 | 80 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2260 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 37 | 81 |
| Pseudomonas aeruginosa PA14 | IKLFDK_14160 | | fused response regulator/phosphatase | no data | 40 | 81 |
| Pseudomonas sp. BP01 | JOY50_RS25185 | rssB | two-component system response regulator RssB | no data | 39 | 81 |
| Pseudomonas putida KT2440 | PP_2165 | | Response regulator | no data | 39 | 81 |
| Pseudomonas sp. RS175 | PFR28_01140 | | Regulator of RpoS | no data | 37 | 81 |
| Rhodospirillum rubrum S1H | Rru_A2234 | | Response regulator receiver domain protein (CheY) (NCBI) | strong | 36 | 84 |
| Pseudomonas sp. DMC3 | GFF1302 | | Regulator of RpoS | no data | 38 | 81 |
| Azospirillum sp. SherDot2 | MPMX19_01443 | | Regulator of RpoS | insig. | 39 | 81 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 36 | 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 36 | 80 |
| Azospirillum sp. SherDot2 | MPMX19_05748 | | Response regulator SaeR | insig. | 35 | 81 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_04380 | | response regulator | strong | 35 | 81 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_05345 | | two-component system response regulator | insig. | 34 | 83 |
| Pseudomonas stutzeri RCH2 | Psest_2710 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | no data | 38 | 81 |
| Azospirillum brasilense Sp245 | AZOBR_RS17205 | | regulator | insig. | 40 | 82 |
| Shewanella loihica PV-4 | Shew_2803 | | DNA-binding transcriptional regulator TorR (RefSeq) | insig. | 40 | 82 |
| Synechocystis sp000284455 PCC 6803 | SGL_RS16475 | | Hpt domain-containing protein | insig. | 36 | 92 |
| Pseudomonas sp. S08-1 | OH686_22730 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 34 | 80 |
| Dechlorosoma suillum PS | Dsui_0331 | | PAS domain S-box | insig. | 38 | 84 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1544 | | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) | insig. | 35 | 79 |
| Shewanella oneidensis MR-1 | SO1228 | torR | torcad operon transcriptional regulatory protein TorR (NCBI ptt file) | insig. | 40 | 81 |
| Rhodospirillum rubrum S1H | Rru_A2326 | | Response regulator receiver domain protein (CheY) (NCBI) | insig. | 39 | 81 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_3074 | | response regulator receiver modulated metal dependent phosphohydrolase (RefSeq) | cofit | 37 | 82 |
| Caulobacter crescentus NA1000 | CCNA_00632 | | chemotaxis receiver domain protein CheYII | insig. | 37 | 86 |
| Caulobacter crescentus NA1000 Δfur | CCNA_00632 | | chemotaxis receiver domain protein CheYII | cofit | 37 | 86 |
| Azospirillum sp. SherDot2 | MPMX19_03749 | | KDP operon transcriptional regulatory protein KdpE | insig. | 40 | 79 |
| Shewanella sp. ANA-3 | Shewana3_1051 | | DNA-binding transcriptional regulator TorR (RefSeq) | insig. | 40 | 81 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1181 | | response regulator (TIGR) | cofit | 36 | 80 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_03685 | | Histidine kinase | no data | 38 | 83 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0408 | | response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) | sig. | 36 | 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5130 | | Tricarboxylate transport transcriptional regulator TctD | strong | 32 | 97 |
| Pseudomonas putida KT2440 | PP_4988 | | signal transduction histidine kinase CheA/CheY-like receiver | strong | 39 | 82 |
| Rhodospirillum rubrum S1H | Rru_A2758 | | Response regulator receiver domain protein (CheY) (NCBI) | cofit | 33 | 89 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS04245 | | chemotaxis protein CheY | insig. | 38 | 89 |
| Bacteroides stercoris CC31F | HMPREF1181_RS03655 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 37 | 63 |
| Rhodopseudomonas palustris CGA009 | TX73_008370 | | response regulator | cofit | 36 | 83 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0732 | | two-component system response regulator (NCBI ptt file) | no data | 33 | 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF646 | | Signal transduction histidine kinase CheA (EC 2.7.3.-) | insig. | 32 | 95 |
| Azospirillum brasilense Sp245 | AZOBR_RS00555 | | chemotaxis protein CheY | insig. | 36 | 95 |
| Cellulophaga baltica 18 | M666_RS00600 | | response regulator | insig. | 33 | 83 |
| Pseudomonas fluorescens SBW25 | PFLU_RS10720 | | response regulator transcription factor | insig. | 43 | 62 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS10720 | | response regulator transcription factor | insig. | 43 | 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4930 | | Two-component system response regulator OmpR | insig. | 40 | 79 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0196 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 33 | 81 |
| Bacteroides ovatus ATCC 8483 | BACOVA_01571 | | Sigma-54 interaction domain protein | insig. | 31 | 63 |
| Pseudomonas stutzeri RCH2 | Psest_2705 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 45 | 62 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_07605 | | response regulator | insig. | 31 | 85 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS05150 | | response regulator | no data | 34 | 82 |
| Pseudomonas aeruginosa PA14 | IKLFDK_20365 | | DNA-binding response regulator | insig. | 41 | 62 |
| Azospirillum brasilense Sp245 | AZOBR_RS14225 | | Fis family transcriptional regulator | no data | 38 | 89 |
| Rhodanobacter sp000427505 FW510-R12 | LRK53_RS13705 | | response regulator | insig. | 37 | 90 |
| Rhodanobacter denitrificans MT42 | LRK55_RS14640 | | response regulator | insig. | 36 | 91 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14925 | | response regulator | insig. | 36 | 91 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_0187 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 33 | 85 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2370 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 39 | 82 |
| Pseudomonas sp. BP01 | JOY50_RS09750 | | Hpt domain-containing protein | insig. | 38 | 82 |
| Magnetospirillum magneticum AMB-1 | AMB_RS04855 | | response regulator | cofit | 34 | 85 |
| Alteromonas macleodii MIT1002 | MIT1002_04221 | | Gliding motility regulatory protein | insig. | 37 | 79 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2371 | | CheY-like response regulator domain | sig. | 34 | 90 |
| Pseudomonas putida KT2440 | PP_1090 | | putative Virulence factors positive transcription regulator BvgA | insig. | 39 | 62 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2433 | | two-component system response regulator (NCBI ptt file) | sig. | 31 | 63 |
| Pseudomonas sp. BP01 | JOY50_RS23985 | | response regulator transcription factor | insig. | 39 | 62 |
| Azospirillum sp. SherDot2 | MPMX19_01947 | | Chemotaxis protein CheY | sig. | 38 | 89 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF642 | | twitching motility protein PilG | cofit | 35 | 83 |
| Caulobacter crescentus NA1000 | CCNA_03585 | | chemotaxis receiver domain protein CheYIV | strong | 35 | 85 |
| Caulobacter crescentus NA1000 Δfur | CCNA_03585 | | chemotaxis receiver domain protein CheYIV | cofit | 35 | 85 |
| Mycobacterium tuberculosis H37Rv | Rv1626 | | Probable two-component system transcriptional regulator | strong | 40 | 85 |
| Marinobacter adhaerens HP15 | HP15_3513 | | response regulator receiver domain protein (CheY) | sig. | 32 | 83 |
| Dechlorosoma suillum PS | Dsui_1180 | | response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein | insig. | 37 | 85 |
| Acinetobacter radioresistens SK82 | MPMX26_02512 | | Response regulator PleD | no data | 32 | 93 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS12130 | | ATP-binding protein | insig. | 31 | 87 |
| Pseudomonas sp. RS175 | PFR28_04227 | | Sensor histidine kinase RcsC | insig. | 39 | 82 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_08085 | | histidine kinase | strong | 37 | 82 |
| Pseudomonas sp. DMC3 | GFF197 | | Response regulator PleD | insig. | 35 | 83 |
| Acidovorax sp. GW101-3H11 | Ac3H11_343 | | Two-component system response regulator OmpR | no data | 40 | 80 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_13500 | | histidine kinase | sig. | 37 | 82 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4347 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 36 | 82 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14915 | | response regulator | insig. | 36 | 91 |
| Variovorax sp. OAS795 | ABID97_RS03810 | | response regulator transcription factor | insig. | 35 | 82 |
| Dechlorosoma suillum PS | Dsui_0660 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | strong | 34 | 83 |
| Klebsiella michiganensis M5al | BWI76_RS17275 | | two-component system response regulator RssB | insig. | 32 | 80 |
| Variovorax sp. OAS795 | ABID97_RS24705 | | response regulator | strong | 32 | 83 |
| Variovorax sp. SCN45 | GFF2151 | | twitching motility protein PilG | strong | 32 | 83 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS24850 | | response regulator | insig. | 36 | 80 |
| Pseudomonas simiae WCS417 | PS417_10655 | | LuxR family transcriptional regulator | insig. | 41 | 62 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4617 | | Signal transduction histidine kinase CheA (EC 2.7.3.-) | strong | 37 | 82 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS07635 | | transcriptional regulator | insig. | 37 | 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF214 | | sensory box histidine kinase/response regulator | insig. | 36 | 80 |