Homologs of helD from Erwinia tracheiphila SCR3

helD: DNA helicase IV
SEED: DNA helicase IV
KEGG: DNA helicase IV

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Erwinia tracheiphila SCR3 LU632_RS10050 helD DNA helicase IV sig. 100 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_20590 helD DNA helicase IV cofit 100 100
o Erwinia amylovora T8 OLJFJH_15910 DNA helicase IV insig. 69 100
o Serratia liquefaciens MT49 IAI46_08900 DNA helicase IV insig. 67 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04710 DNA helicase IV strong 67 100
o Enterobacter sp. TBS_079 MPMX20_01612 DNA helicase IV insig. 66 100
o Pantoea sp. MT58 IAI47_12620 DNA helicase IV insig. 66 100
o Enterobacter asburiae PDN3 EX28DRAFT_1981 Superfamily I DNA and RNA helicases insig. 66 100
o Rahnella sp. WP5 EX31_RS18015 DNA helicase IV insig. 66 100
o Escherichia coli BL21 ECD_00966 DNA helicase IV insig. 65 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02704 DNA helicase IV cofit 65 100
o Escherichia coli BW25113 b0962 helD DNA helicase IV (NCBI) sig. 65 100
o Escherichia coli ECOR27 NOLOHH_21765 helD DNA helicase IV insig. 65 100
o Escherichia coli ECRC100 OKFHMN_05210 helD DNA helicase IV insig. 65 100
o Escherichia coli ECRC101 MCAODC_24600 helD DNA helicase IV sig. 65 100
o Escherichia coli ECRC102 NIAGMN_02930 helD DNA helicase IV no data 65 100
o Escherichia coli ECRC99 KEDOAH_22525 helD DNA helicase IV no data 65 100
o Escherichia fergusonii Becca EFB2_03109 DNA helicase IV insig. 65 100
o Escherichia coli ECRC62 BNILDI_19930 helD DNA helicase IV insig. 64 100
o Escherichia coli ECRC98 JDDGAC_08820 helD DNA helicase IV sig. 64 100
o Escherichia coli Nissle 1917 ECOLIN_RS05055 DNA helicase IV insig. 64 100
o Escherichia coli ECOR38 HEPCGN_23310 helD DNA helicase IV insig. 64 100
o Pectobacterium carotovorum WPP14 HER17_RS08445 DNA helicase IV cofit 63 100
o Klebsiella michiganensis M5al BWI76_RS09995 DNA helicase IV sig. 63 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3253 DNA helicase IV insig. 63 100
o Klebsiella pneumoniae MKP103 KDGMDA_18225 DNA helicase IV insig. 62 100
o Dickeya dadantii 3937 DDA3937_RS15220 DNA helicase IV insig. 63 100
o Dickeya dianthicola 67-19 HGI48_RS15295 DNA helicase IV insig. 62 100
o Dickeya dianthicola ME23 DZA65_RS16120 DNA helicase IV insig. 62 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_17760 DNA helicase IV insig. 36 100
  Bacteroides thetaiotaomicron VPI-5482 BT2999 helicase IV (NCBI ptt file) insig. 38 41
  Phocaeicola dorei CL03T12C01 ABI39_RS19005 UvrD-helicase domain-containing protein insig. 36 41
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01560 UvrD-helicase domain-containing protein no data 27 49
  Rhodanobacter denitrificans MT42 LRK55_RS06595 DNA helicase II no data 27 49
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS06850 DNA helicase II sig. 27 49
  Rhodanobacter sp. FW510-T8 OKGIIK_16775 DNA helicase cofit 28 49
  Kangiella aquimarina DSM 16071 B158DRAFT_0238 Superfamily I DNA and RNA helicases strong 27 51
  Marinobacter adhaerens HP15 HP15_214 DNA helicase, ATP-dependent, RepA type no data 29 48
  Pseudomonas fluorescens FW300-N2C3 AO356_11990 DNA helicase II strong 29 48
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA strong 29 48
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 26 48
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04469 ATP-dependent DNA helicase UvrD no data 28 49
  Burkholderia phytofirmans PsJN BPHYT_RS13840 DNA-dependent helicase no data 28 49
  Pseudomonas aeruginosa MRSN321 DY961_RS25505 uvrD;go_function=DNA DNA helicase II strong 30 46
  Pseudomonas aeruginosa PUPa3 DQ20_RS57955 uvrD;go_function=DNA DNA helicase II insig. 30 46
  Pseudomonas sp. DMC3 GFF512 DNA helicase II cofit 30 48
  Pseudomonas aeruginosa MRSN321 DY961_RS12370 rep;go_function=DNA DNA helicase Rep no data 29 49
  Pseudomonas aeruginosa PA14 IKLFDK_26970 DNA helicase Rep no data 29 49
  Pseudomonas aeruginosa PUPa3 DQ20_RS49760 rep;go_function=DNA DNA helicase Rep no data 29 49
  Pseudomonas putida KT2440 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex strong 27 48
  Pseudomonas aeruginosa PA14 IKLFDK_26200 DNA helicase II sig. 30 46
  Pseudomonas fluorescens GW456-L13 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA sig. 29 48
  Pseudomonas sp. RS175 PFR28_04523 DNA helicase II sig. 29 48
  Pseudomonas fluorescens FW300-N2E3 AO353_10055 DNA helicase II strong 29 48
  Pseudomonas sp. BP01 JOY50_RS08735 uvrD DNA helicase II insig. 27 48
  Ralstonia solanacearum GMI1000 RS_RS11220 DNA-dependent helicase insig. 27 51
  Xanthobacter sp. DMC5 GFF3566 ATP-dependent DNA helicase PcrA insig. 31 49
  Pseudomonas sp. SVBP6 COO64_RS01845 uvrD DNA helicase II strong 29 48
  Pseudomonas syringae pv. syringae B728a Psyr_5065 ATP-dependent DNA helicase UvrD strong 28 48
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5065 ATP-dependent DNA helicase UvrD strong 28 48
  Pseudomonas segetis P6 MPMX49_00180 DNA helicase II strong 29 48
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA insig. 29 48
  Dechlorosoma suillum PS Dsui_1227 DNA/RNA helicase, superfamily I strong 27 48
  Pseudomonas orientalis W4I3 QF045_RS02600 DNA helicase II cofit 29 48
  Azospirillum brasilense Sp245 AZOBR_RS12445 DNA helicase II insig. 28 50
  Dickeya dadantii 3937 DDA3937_RS20105 DNA helicase Rep no data 29 49
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16965 DNA helicase II strong 27 48
  Desulfovibrio vulgaris Hildenborough JW710 DVU0156 pcrA ATP-dependent DNA helicase, UvrD/REP family (TIGR) insig. 27 48
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00116 DNA helicase II cofit 29 48
  Paraburkholderia graminis OAS925 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA no data 28 49
  Castellaniella sp019104865 MT123 ABCV34_RS05210 UvrD-helicase domain-containing protein sig. 27 52
  Pseudomonas fluorescens SBW25 PFLU_RS29900 DNA helicase II cofit 29 48
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29900 DNA helicase II strong 29 48
  Marinobacter adhaerens HP15 HP15_3403 UvrD/REP helicase strong 27 49
  Pseudomonas sp. RS175 PFR28_04392 ATP-dependent DNA helicase Rep no data 27 49
  Dickeya dianthicola 67-19 HGI48_RS20245 DNA helicase Rep no data 29 49
  Dickeya dianthicola ME23 DZA65_RS21290 DNA helicase Rep no data 29 49
  Pantoea sp. MT58 IAI47_18545 DNA helicase Rep no data 28 52
  Alteromonas macleodii MIT1002 MIT1002_00153 DNA helicase II sig. 26 54
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15540 DNA helicase Rep no data 28 52
  Pseudomonas stutzeri RCH2 Psest_3778 ATP-dependent DNA helicase Rep no data 29 49
  Sphingobium sp. HT1-2 GFF1640 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) insig. 28 55
  Burkholderia phytofirmans PsJN BPHYT_RS32035 hypothetical protein insig. 32 33
  Pseudomonas fluorescens FW300-N2C3 AO356_12655 ATP-dependent DNA helicase Rep no data 27 49
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4398 ATP-dependent DNA helicase Rep no data 27 49
  Azospirillum sp. SherDot2 MPMX19_01610 ATP-dependent DNA helicase PcrA insig. 27 50
  Serratia liquefaciens MT49 IAI46_00735 DNA helicase II strong 27 48
  Pseudomonas sp. BP01 JOY50_RS09155 rep DNA helicase Rep no data 28 49
  Erwinia amylovora T8 OLJFJH_06425 DNA helicase II sig. 28 48
  Kangiella aquimarina DSM 16071 B158DRAFT_0352 ATP-dependent DNA helicase Rep (EC 3.6.1.-) strong 27 53
  Acinetobacter radioresistens SK82 MPMX26_00369 ATP-dependent DNA helicase PcrA insig. 25 49
  Pseudomonas sp. S08-1 OH686_03735 hypothetical protein insig. 25 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_819 ATP-dependent DNA helicase Rep no data 28 49
  Klebsiella pneumoniae MKP103 KDGMDA_09710 DNA helicase II sig. 27 48
  Klebsiella michiganensis M5al BWI76_RS01220 DNA-dependent helicase II strong 27 48
  Paraburkholderia sabiae LMG 24235 QEN71_RS05110 3'-5' exonuclease no data 27 49
  Shewanella amazonensis SB2B Sama_3266 ATP-dependent DNA helicase Rep (RefSeq) no data 28 52
  Fusobacterium nucleatum SB010 HUW76_07455 ATP-dependent helicase cofit 28 47
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08770 uvrD DNA helicase II no data 27 48
  Escherichia coli ECOR38 HEPCGN_13115 uvrD DNA helicase II cofit 27 48