Homologs of HSERO_RS11275 from Herbaspirillum seropedicae SmR1

membrane protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS11275 membrane protein insig. 100 100
o Cupriavidus basilensis FW507-4G11 RR42_RS25885 diguanylate cyclase insig. 34 85
  Acidovorax sp. GW101-3H11 Ac3H11_1766 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 49
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03825 diguanylate cyclase (GGDEF) domain-containing protein insig. 33 64
  Pseudomonas syringae pv. syringae B728a Psyr_2281 GGDEF domain protein insig. 43 41
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2281 GGDEF domain protein insig. 43 41
  Agrobacterium fabrum C58 Atu2179 GGDEF family protein insig. 37 64
  Acinetobacter radioresistens SK82 MPMX26_02556 hypothetical protein no data 34 51
  Rhodopseudomonas palustris CGA009 TX73_008515 GGDEF domain-containing protein insig. 31 82
  Shewanella loihica PV-4 Shew_3023 diguanylate cyclase (RefSeq) insig. 42 41
  Serratia liquefaciens MT49 IAI46_05820 diguanylate cyclase insig. 38 48
o Variovorax sp. SCN45 GFF2106 hypothetical protein insig. 31 88
  Acidovorax sp. GW101-3H11 Ac3H11_4285 diguanylate cyclase insig. 29 90
  Dechlorosoma suillum PS Dsui_3035 diguanylate cyclase (GGDEF) domain-containing protein cofit 41 40
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1357 PUTATIVE TRANSMEMBRANE PROTEIN insig. 47 39
  Kangiella aquimarina DSM 16071 B158DRAFT_0300 diguanylate cyclase (GGDEF) domain insig. 42 40
  Pseudomonas fluorescens FW300-N2C3 AO356_25285 diguanylate cyclase insig. 46 39
  Desulfovibrio vulgaris Miyazaki F DvMF_2637 diguanylate cyclase with extracellular sensor (RefSeq) insig. 41 42
  Marinobacter adhaerens HP15 HP15_3803 GGDEF domain-like protein insig. 40 47
o Burkholderia phytofirmans PsJN BPHYT_RS28915 diguanylate cyclase insig. 40 44
  Kangiella aquimarina DSM 16071 B158DRAFT_0954 diguanylate cyclase (GGDEF) domain insig. 39 40
  Pseudomonas fluorescens SBW25 PFLU_RS13490 sensor domain-containing diguanylate cyclase insig. 36 52
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13490 sensor domain-containing diguanylate cyclase insig. 36 52
  Pseudomonas stutzeri RCH2 Psest_3192 diguanylate cyclase (GGDEF) domain strong 44 40
  Cupriavidus basilensis FW507-4G11 RR42_RS33280 diguanylate cyclase insig. 39 49
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0187 diguanylate cyclase (GGDEF) domain insig. 38 48
  Dechlorosoma suillum PS Dsui_3164 diguanylate cyclase (GGDEF) domain-containing protein cofit 38 46
  Pseudomonas simiae WCS417 PS417_12810 diguanylate cyclase insig. 36 52
  Cupriavidus basilensis FW507-4G11 RR42_RS32390 citrate synthase insig. 36 60
  Rahnella sp. WP5 EX31_RS20690 diguanylate cyclase cofit 40 42
  Cupriavidus basilensis FW507-4G11 RR42_RS29510 hypothetical protein insig. 42 43
  Acidovorax sp. GW101-3H11 Ac3H11_2280 diguanylate cyclase insig. 37 50
o Paraburkholderia sabiae LMG 24235 QEN71_RS35950 GGDEF domain-containing protein insig. 40 45
  Pectobacterium carotovorum WPP14 HER17_RS05020 sensor domain-containing diguanylate cyclase cofit 38 42
  Magnetospirillum magneticum AMB-1 AMB_RS06820 GGDEF domain-containing protein cofit 43 42
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1617 COG2199: FOG: GGDEF domain insig. 42 39
  Pseudomonas syringae pv. syringae B728a Psyr_0509 PAS:GGDEF insig. 39 47
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0509 PAS:GGDEF insig. 39 47
  Acidovorax sp. GW101-3H11 Ac3H11_1001 GGDEF/PAS/PAC-domain containing protein insig. 30 81
  Shewanella amazonensis SB2B Sama_2623 cyclic nucleotide phosphodiesterase, putative (RefSeq) strong 40 40
  Pseudomonas sp. S08-1 OH686_11660 hypothetical protein cofit 39 45
  Pseudomonas putida KT2440 PP_3348 GGDEF domain protein sig. 35 52
  Acidovorax sp. GW101-3H11 Ac3H11_859 GAF domain/sensory box/EAL domain protein insig. 44 40
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 42 39
  Ralstonia sp. UNC404CL21Col ABZR87_RS21625 GGDEF domain-containing protein insig. 42 42
  Pseudomonas putida KT2440 PP_0216 putative sensory box/GGDEF family protein insig. 39 45
  Rhizobium sp. OAE497 ABIE40_RS02130 GGDEF domain-containing protein insig. 37 46
  Pseudomonas sp. RS175 PFR28_01649 hypothetical protein insig. 44 39
  Pseudomonas fluorescens FW300-N2C3 AO356_10705 diguanylate cyclase insig. 40 41
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15585 GGDEF domain-containing protein insig. 35 58
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3834 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 39
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4011 Sensory box/GGDEF family protein insig. 41 41
  Magnetospirillum magneticum AMB-1 AMB_RS23435 GGDEF domain-containing protein insig. 39 46
  Herbaspirillum seropedicae SmR1 HSERO_RS13895 diguanylate cyclase insig. 40 39
  Pseudomonas sp. S08-1 OH686_05940 GGDEF domain protein cofit 37 47
  Marinobacter adhaerens HP15 HP15_611 diguanylate cyclase insig. 30 78
  Pseudomonas syringae pv. syringae B728a Psyr_1309 response regulator receiver modulated diguanylate cyclase insig. 41 40
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1309 response regulator receiver modulated diguanylate cyclase insig. 41 40
  Pseudomonas sp. S08-1 OH686_17790 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 42
  Pseudomonas simiae WCS417 PS417_21835 histidine kinase insig. 35 49
  Pseudomonas syringae pv. syringae B728a Psyr_0088 PAS:GGDEF insig. 42 40
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0088 PAS:GGDEF insig. 42 40
  Pseudomonas putida KT2440 PP_2413 GGDEF family protein sig. 41 46
  Rhodanobacter denitrificans MT42 LRK55_RS17540 ligand-binding sensor domain-containing diguanylate cyclase insig. 43 41
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17315 ligand-binding sensor domain-containing diguanylate cyclase insig. 43 41
  Ralstonia sp. UNC404CL21Col ABZR87_RS03580 sensor domain-containing diguanylate cyclase insig. 43 44
  Acidovorax sp. GW101-3H11 Ac3H11_3698 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 41
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4751 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 40 40
  Pseudomonas sp. RS175 PFR28_04758 hypothetical protein insig. 39 46
  Paraburkholderia graminis OAS925 ABIE53_005820 diguanylate cyclase (GGDEF)-like protein insig. 38 42
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 37 45
  Rhodanobacter denitrificans MT42 LRK55_RS15305 GGDEF domain-containing protein insig. 35 58
  Pseudomonas sp. S08-1 OH686_18785 hypothetical protein insig. 42 40
  Rhodospirillum rubrum S1H Rru_A1908 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI) insig. 41 49
  Kangiella aquimarina DSM 16071 B158DRAFT_0309 diguanylate cyclase (GGDEF) domain insig. 38 39
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1731 Sensory box/GGDEF family protein insig. 35 46
  Pseudomonas fluorescens SBW25 PFLU_RS23435 diguanylate cyclase insig. 34 51
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23435 diguanylate cyclase insig. 34 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS32265 diguanylate cyclase insig. 42 41
  Azospirillum sp. SherDot2 MPMX19_05017 hypothetical protein insig. 40 45
  Rhodospirillum rubrum S1H Rru_A2593 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 43 39
  Dinoroseobacter shibae DFL-12 Dshi_2820 response regulator receiver modulated diguanylate cyclase (RefSeq) sig. 43 41
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1290 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 43 41
  Ralstonia solanacearum PSI07 RPSI07_RS01985 GGDEF domain-containing protein insig. 42 42
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_40 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 42
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 39 46
  Magnetospirillum magneticum AMB-1 AMB_RS16670 diguanylate cyclase insig. 39 42
  Pseudomonas stutzeri RCH2 Psest_4293 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 39 46
  Rhodanobacter denitrificans MT42 LRK55_RS01820 diguanylate cyclase insig. 44 42
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02045 GGDEF domain-containing protein insig. 44 42
  Rhodanobacter sp. FW510-T8 OKGIIK_09110 Diguanylate cyclase insig. 42 42
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5815 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 39
  Pseudomonas fluorescens FW300-N2E3 AO353_11520 diguanylate cyclase strong 40 42
  Cupriavidus basilensis FW507-4G11 RR42_RS09990 DeoR family transcriptional regulator insig. 39 45
  Ralstonia solanacearum PSI07 RPSI07_RS09290 GGDEF domain-containing protein insig. 39 42
  Acidovorax sp. GW101-3H11 Ac3H11_3356 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 44
  Azospirillum brasilense Sp245 AZOBR_RS06990 response regulator receiver modulated diguanylate cyclase insig. 43 39
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21160 GGDEF domain-containing protein insig. 41 44
  Ralstonia solanacearum UW163 UW163_RS22300 GGDEF domain-containing protein insig. 41 44
  Desulfovibrio vulgaris Hildenborough JW710 DVU3068 GAF domain/sensory box/EAL domain protein (TIGR) insig. 39 41