Homologs of HSERO_RS10550 from Herbaspirillum seropedicae SmR1

histidine kinase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS10550 histidine kinase insig. 100 100
o Castellaniella sp019104865 MT123 ABCV34_RS13585 diguanylate cyclase cofit 30 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_13870 sensor domain-containing phosphodiesterase insig. 27 76
  Burkholderia phytofirmans PsJN BPHYT_RS29510 deoxyuridine 5`-triphosphate nucleotidohydrolase insig. 31 52
  Pseudomonas sp. S08-1 OH686_16635 hypothetical protein insig. 28 65
  Shewanella loihica PV-4 Shew_2121 diguanylate cyclase (RefSeq) cofit 31 41
  Paraburkholderia graminis OAS925 ABIE53_005160 diguanylate cyclase (GGDEF)-like protein strong 35 38
  Dechlorosoma suillum PS Dsui_0513 diguanylate cyclase (GGDEF) domain-containing protein cofit 41 28
  Pseudomonas sp. S08-1 OH686_19830 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 32
  Azospirillum brasilense Sp245 AZOBR_RS17635 hypothetical protein insig. 34 43
  Acidovorax sp. GW101-3H11 Ac3H11_190 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no data 36 36
  Pseudomonas sp. DMC3 GFF2244 hypothetical protein cofit 42 30
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07185 EAL domain-containing protein cofit 42 27
  Methylophilus sp. DMC18 GFF1655 putative signaling protein insig. 41 28
  Pseudomonas sp. RS175 PFR28_00658 hypothetical protein insig. 41 28
  Dechlorosoma suillum PS Dsui_1824 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 51 21
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01520 diguanylate cyclase (GGDEF) domain-containing protein insig. 36 34
  Acinetobacter radioresistens SK82 MPMX26_01917 hypothetical protein no data 25 69
  Synechocystis sp000284455 PCC 6803 SGL_RS03320 EAL domain-containing protein insig. 45 21
  Pseudomonas fluorescens FW300-N2C3 AO356_04750 diguanylate cyclase insig. 39 30
  Pseudomonas sp. DMC3 GFF2190 putative signaling protein insig. 37 30
  Pseudomonas fluorescens FW300-N2C3 AO356_24220 diguanylate cyclase insig. 48 22
  Shewanella oneidensis MR-1 SO2434 extracellular solute-binding proteins, family 3/GGDEF domain protein (NCBI ptt file) insig. 41 28
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2796 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 30
  Paraburkholderia sabiae LMG 24235 QEN71_RS10745 EAL domain-containing protein insig. 35 38
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1640 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 22
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04898 Diguanylate cyclase DgcN insig. 46 21
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 45 23
  Shewanella sp. ANA-3 Shewana3_1952 diguanylate cyclase (RefSeq) insig. 41 28
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3277 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 29
  Shewanella amazonensis SB2B Sama_1891 GGDEF family protein (RefSeq) insig. 34 35
  Alteromonas macleodii MIT1002 MIT1002_01199 Bacteriophytochrome cph2 insig. 50 21
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 40 27
  Rhodanobacter sp. FW510-T8 OKGIIK_07905 Diguanylate cyclase insig. 40 27
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 42 27
  Rhodanobacter denitrificans MT42 LRK55_RS16650 EAL domain-containing protein strong 41 27
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16935 bifunctional diguanylate cyclase/phosphodiesterase strong 41 27
  Cupriavidus basilensis FW507-4G11 RR42_RS00130 diguanylate cyclase insig. 40 27
  Pseudomonas segetis P6 MPMX49_00863 hypothetical protein insig. 37 30
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 42 27
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 39 28
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 40 30
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 38 30
  Azospirillum sp. SherDot2 MPMX19_04927 hypothetical protein insig. 34 44
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 48 22
  Dechlorosoma suillum PS Dsui_2425 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 45 21
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12010 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 27
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 38 30
  Pseudomonas fluorescens SBW25 PFLU_RS25575 diguanylate cyclase insig. 45 21
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25575 diguanylate cyclase sig. 45 21
  Acidovorax sp. GW101-3H11 Ac3H11_980 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 27
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 34 38
  Pseudomonas sp. DMC3 GFF4916 Diguanylate cyclase DgcN insig. 47 22
  Pseudomonas sp. SVBP6 COO64_RS02695 diguanylate cyclase domain-containing protein insig. 41 27
  Herbaspirillum seropedicae SmR1 HSERO_RS13970 diguanylate cyclase insig. 34 35
  Paraburkholderia sabiae LMG 24235 QEN71_RS08805 EAL domain-containing protein insig. 44 22
  Shewanella oneidensis MR-1 SO1055 sensory box protein (NCBI ptt file) insig. 41 29
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 30
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1232 Inner membrane protein YfiN insig. 44 22
  Kangiella aquimarina DSM 16071 B158DRAFT_1581 diguanylate cyclase (GGDEF) domain insig. 44 21
  Pseudomonas simiae WCS417 PS417_23760 DeoR faimly transcriptional regulator sig. 44 21
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 39 28
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 38 30
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 37 36
  Paraburkholderia sabiae LMG 24235 QEN71_RS09820 diguanylate cyclase insig. 36 38
  Shewanella amazonensis SB2B Sama_0965 GGDEF domain-containing protein (RefSeq) sig. 35 37
  Pseudomonas stutzeri RCH2 Psest_1569 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 39 28
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 38 30
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 42 27
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 38 30
  Kangiella aquimarina DSM 16071 B158DRAFT_1127 diguanylate cyclase (GGDEF) domain insig. 39 28
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 38 28
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 38 28
  Pseudomonas orientalis W4I3 QF045_RS25995 diguanylate cyclase insig. 45 21
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 38 30
  Alteromonas macleodii MIT1002 MIT1002_02202 Cyclic di-GMP phosphodiesterase Gmr insig. 36 30
  Methylophilus sp. DMC18 GFF1453 hypothetical protein insig. 40 27
  Burkholderia phytofirmans PsJN BPHYT_RS29225 diguanylate phosphodiesterase insig. 38 30
  Pseudomonas sp. BP01 JOY50_RS27620 diguanylate cyclase domain-containing protein insig. 44 22
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 30
  Pseudomonas fluorescens SBW25 PFLU_RS06660 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 30
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06660 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 30
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 35 33
  Lysobacter sp. OAE881 ABIE51_RS14975 EAL domain-containing protein insig. 33 40
  Variovorax sp. SCN45 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 44
  Shewanella sp. ANA-3 Shewana3_1161 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 36 30
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3210 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 30
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3456 Inner membrane protein YfiN sig. 44 22
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 31
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 22
  Shewanella sp. ANA-3 Shewana3_1034 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 36 35
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 38 30
  Burkholderia phytofirmans PsJN BPHYT_RS27880 diguanylate phosphodiesterase insig. 47 21
  Pseudomonas fluorescens FW300-N2E3 AO353_06010 diguanylate cyclase insig. 45 22
  Cupriavidus basilensis FW507-4G11 RR42_RS09815 diguanylate cyclase insig. 43 27
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 41 23
  Pseudomonas sp. RS175 PFR28_00266 hypothetical protein insig. 39 30
  Xanthobacter sp. DMC5 GFF1232 hypothetical protein insig. 39 30
  Pseudomonas aeruginosa MRSN321 DY961_RS10425 diguanylate cyclase insig. 38 29
  Pseudomonas aeruginosa PA14 IKLFDK_28905 Diguanylate cyclase insig. 38 29