Homologs of HMPREF1058_RS04935 from Phocaeicola vulgatus CL09T03C04

site-specific integrase
SEED: Phage integrase:Phage integrase, N-terminal SAM-like
KEGG: integrase/recombinase XerD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04935 site-specific integrase sig. 100 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS08890 site-specific integrase insig. 88 100
o Bacteroides stercoris CC31F HMPREF1181_RS09900 site-specific integrase insig. 86 100
o Phocaeicola dorei CL03T12C01 ABI39_RS16135 site-specific integrase insig. 47 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09695 integrase strong 45 75
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3270 Site-specific recombinase XerD insig. 44 74
  Magnetospirillum magneticum AMB-1 AMB_RS04775 integrase insig. 38 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS42900 site-specific integrase no data 34 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS44560 site-specific integrase no data 34 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS42770 site-specific integrase insig. 35 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS39850 site-specific integrase no data 34 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS42300 site-specific integrase no data 34 73
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 37 74
  Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 37 74
  Bosea sp. OAE506 ABIE41_RS00515 tyrosine-type recombinase/integrase insig. 36 73
  Kangiella aquimarina DSM 16071 B158DRAFT_0342 integron integrase insig. 33 73
  Burkholderia phytofirmans PsJN BPHYT_RS05275 integrase no data 37 73
  Burkholderia phytofirmans PsJN BPHYT_RS32945 integrase no data 37 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS44370 site-specific integrase insig. 37 63
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1244 Site-specific recombinase XerD no data 34 73
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1749 Site-specific recombinase XerD no data 34 73
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1789 Site-specific recombinase XerD no data 34 73
  Shewanella amazonensis SB2B Sama_1355 phage integrase family site specific recombinase (RefSeq) insig. 31 71
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 39 64
  Paraburkholderia graminis OAS925 ABIE53_001488 site-specific recombinase XerD sig. 37 73
  Shewanella oneidensis MR-1 SO2037 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 31 74
  Vibrio cholerae E7946 ATCC 55056 CSW01_15405 integron integrase insig. 30 73
  Pseudomonas sp. S08-1 OH686_18870 Integron integrase IntIPac insig. 30 74
  Rhodanobacter denitrificans MT42 LRK55_RS08605 integron integrase insig. 31 72
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15025 tyrosine recombinase XerC strong 29 71
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 32 70
  Desulfovibrio vulgaris Miyazaki F DvMF_0359 tyrosine recombinase XerD (RefSeq) strong 33 71
  Rhodanobacter sp. FW510-T8 OKGIIK_15560 Integrase insig. 29 72
  Desulfovibrio vulgaris Hildenborough JW710 DVU1654 xerD site-specific recombinase, phage integrase family (TIGR) sig. 41 48
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.449.1 Integrase insig. 30 73
  Agrobacterium fabrum C58 Atu3629 site-specific tyrosine recombinase XerD no data 29 73
  Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 30 70
  Caulobacter crescentus NA1000 CCNA_03101 site-specific tyrosine recombinase XerD strong 33 72
  Caulobacter crescentus NA1000 Δfur CCNA_03101 site-specific tyrosine recombinase XerD cofit 33 72
  Shewanella sp. ANA-3 Shewana3_3331 tyrosine recombinase XerD (RefSeq) strong 31 69
  Shewanella oneidensis MR-1 SO2036 site-specific recombinase, phage integrase family (NCBI ptt file) no data 33 63
  Shewanella oneidensis MR-1 SO2528 site-specific recombinase, phage integrase family (NCBI ptt file) no data 33 63
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.847.1 Site-specific tyrosine recombinase no data 31 72
  Acinetobacter radioresistens SK82 MPMX26_02230 Tyrosine recombinase XerC no data 28 72
  Lysobacter sp. OAE881 ABIE51_RS03035 tyrosine recombinase XerC strong 32 72
  Shewanella oneidensis MR-1 SO2164 site-specific recombinase, phage integrase family (NCBI ptt file) no data 33 63
  Shewanella oneidensis MR-1 SO2211 site-specific recombinase, phage integrase family (NCBI ptt file) no data 33 63
  Rhodanobacter denitrificans MT42 LRK55_RS08300 tyrosine recombinase XerC strong 29 72
  Rhodanobacter sp. FW510-T8 OKGIIK_15325 xerC tyrosine recombinase XerC no data 28 71
  Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 30 71
  Bacteroides stercoris CC31F HMPREF1181_RS12755 hypothetical protein insig. 53 27
  Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 30 69
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 32 69
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 31 65
  Shewanella amazonensis SB2B Sama_2739 integrase/recombinase XerD (RefSeq) strong 32 70
  Variovorax sp. SCN45 GFF2772 Site-specific tyrosine recombinase XerD strong 31 67
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19035 integrase no data 30 70
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD sig. 38 44
  Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 30 70
  Paraburkholderia graminis OAS925 ABIE53_003361 integrase/recombinase XerD strong 31 67
  Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 30 70
  Bacteroides thetaiotaomicron VPI-5482 BT2843 integrase (NCBI ptt file) strong 30 70
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08535 tyrosine recombinase XerC insig. 29 72
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 31 67
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 30 71
  Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 29 67
  Rahnella sp. WP5 EX31_RS15165 tyrosine recombinase XerC strong 29 73
  Alteromonas macleodii MIT1002 MIT1002_00573 Tyrosine recombinase XerD insig. 29 73
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 29 71
  Variovorax sp. OAS795 ABID97_RS20265 site-specific tyrosine recombinase XerD insig. 31 67
  Paraburkholderia sabiae LMG 24235 QEN71_RS44390 site-specific integrase insig. 30 72
  Bosea sp. OAE506 ABIE41_RS06100 site-specific tyrosine recombinase XerD strong 29 75
  Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 28 73
  Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 30 69
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 29 73
  Pseudomonas syringae pv. syringae B728a Psyr_0185 tyrosine recombinase XerC subunit sig. 28 72
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0185 tyrosine recombinase XerC subunit sig. 28 72
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD insig. 36 44
  Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 37 45
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 37 45
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04126 integrase/recombinase XerD no data 30 67
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 29 73
  Burkholderia phytofirmans PsJN BPHYT_RS15950 tyrosine recombinase XerD sig. 31 67
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 30 69
  Escherichia coli ECRC100 OKFHMN_14420 xerC tyrosine recombinase XerC insig. 28 72
  Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 28 72
  Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 28 72
  Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 28 72
  Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 28 72
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 28 73
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 28 73
  Rhodopseudomonas palustris CGA009 TX73_002625 site-specific tyrosine recombinase XerD sig. 29 71
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4416 Tyrosine recombinase XerC strong 28 72
  Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 28 72
  Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC insig. 28 72
  Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC insig. 28 72
  Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC insig. 28 72
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 28 72
  Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC strong 28 72
  Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 28 72