Homologs of HMPREF1058_RS02550 from Phocaeicola vulgatus CL09T03C04

NUDIX domain-containing protein
SEED: Putative Nudix hydrolase YfcD (EC 3.6.-.-)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02550 NUDIX domain-containing protein sig. 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS01835 NUDIX domain-containing protein insig. 98 100
o Bacteroides thetaiotaomicron VPI-5482 BT3972 putative NTP pyrophosphohydrolase (NCBI ptt file) sig. 81 100
o Bacteroides stercoris CC31F HMPREF1181_RS06480 NUDIX domain-containing protein insig. 81 99
o Bacteroides ovatus ATCC 8483 BACOVA_04617 hydrolase, NUDIX family insig. 80 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS01105 NUDIX domain-containing protein insig. 70 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1298 Putative Nudix hydrolase YfcD (EC 3.6.-.-) insig. 31 94
o Pseudomonas simiae WCS417 PS417_02995 NUDIX hydrolase insig. 29 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3506 Putative Nudix hydrolase YfcD (EC 3.6.-.-) insig. 31 92
  Pseudomonas fluorescens FW300-N2E3 AO353_13710 NUDIX hydrolase insig. 31 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_45 Putative Nudix hydrolase YfcD (EC 3.6.-.-) insig. 31 90
o Pseudomonas fluorescens FW300-N2C3 AO356_08165 NUDIX hydrolase insig. 29 92
o Pseudomonas fluorescens SBW25 PFLU_RS03070 NUDIX hydrolase insig. 27 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03070 NUDIX hydrolase insig. 27 94
o Pseudomonas sp. RS175 PFR28_05226 putative Nudix hydrolase YfcD insig. 29 90
  Bacteroides thetaiotaomicron VPI-5482 BT4191 hypothetical protein (NCBI ptt file) strong 28 95
o Pseudomonas syringae pv. syringae B728a Psyr_4379 NUDIX hydrolase insig. 27 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4379 NUDIX hydrolase insig. 27 90
o Rhodanobacter denitrificans MT42 LRK55_RS08325 isopentenyl-diphosphate Delta-isomerase insig. 28 97
o Pseudomonas putida KT2440 PP_0565 putative enzyme insig. 28 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08560 isopentenyl-diphosphate Delta-isomerase insig. 28 97
  Mycobacterium tuberculosis H37Rv Rv1745c Probable isopentenyl-diphosphate delta-isomerase Idi (IPP isomerase) (isopentenyl pyrophosphate isomerase) strong 25 93
o Serratia liquefaciens MT49 IAI46_11275 isopentenyl-diphosphate Delta-isomerase insig. 31 88
  Desulfovibrio vulgaris Miyazaki F DvMF_0346 NUDIX hydrolase (RefSeq) strong 31 75
  Bacteroides stercoris CC31F HMPREF1181_RS08795 hypothetical protein strong 27 92
  Pseudomonas sp. S08-1 OH686_07555 Putative Nudix hydrolase YfcD insig. 40 52
  Escherichia coli ECRC62 BNILDI_10050 idi isopentenyl-diphosphate Delta-isomerase insig. 36 54
  Escherichia fergusonii Becca EFB2_01012 Isopentenyl-diphosphate Delta-isomerase insig. 36 54
  Escherichia coli Nissle 1917 ECOLIN_RS16100 isopentenyl-diphosphate Delta-isomerase insig. 36 54
  Escherichia coli ECOR38 HEPCGN_18885 idi isopentenyl-diphosphate Delta-isomerase insig. 36 54
  Escherichia coli BL21 ECD_02721 isopentenyl diphosphate isomerase cofit 36 54
  Bacteroides ovatus ATCC 8483 BACOVA_05044 hypothetical protein strong 26 95
  Serratia liquefaciens MT49 IAI46_17760 NUDIX hydrolase YfcD insig. 35 53
  Rahnella sp. WP5 EX31_RS19520 NUDIX hydrolase YfcD insig. 29 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16780 hypothetical protein no data 27 96
  Escherichia coli BW25113 b2889 idi isopentenyl-diphosphate delta-isomerase (NCBI) sig. 35 54
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2986 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) insig. 36 56
  Escherichia coli ECOR27 NOLOHH_11520 idi isopentenyl-diphosphate Delta-isomerase insig. 35 54
  Escherichia coli ECRC100 OKFHMN_19595 idi isopentenyl-diphosphate Delta-isomerase cofit 35 54
  Escherichia coli ECRC101 MCAODC_10115 idi isopentenyl-diphosphate Delta-isomerase insig. 35 54
  Escherichia coli ECRC102 NIAGMN_17360 idi isopentenyl-diphosphate Delta-isomerase insig. 35 54
  Escherichia coli ECRC98 JDDGAC_23235 idi isopentenyl-diphosphate Delta-isomerase cofit 35 54
  Escherichia coli ECRC99 KEDOAH_08545 idi isopentenyl-diphosphate Delta-isomerase no data 35 54
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00826 Isopentenyl-diphosphate Delta-isomerase insig. 35 54
  Enterobacter sp. TBS_079 MPMX20_03748 Isopentenyl-diphosphate Delta-isomerase insig. 32 56
  Pseudomonas fluorescens FW300-N2E3 AO353_19625 isopentenyl-diphosphate delta-isomerase insig. 27 96
  Desulfovibrio vulgaris Hildenborough JW710 DVU1679 idi isopentenyl-diphosphate delta-isomerase (TIGR) strong 30 69
  Enterobacter sp. TBS_079 MPMX20_03234 putative Nudix hydrolase YfcD strong 33 53
  Enterobacter asburiae PDN3 EX28DRAFT_0305 Isopentenyldiphosphate isomerase sig. 33 53
  Pantoea sp. MT58 IAI47_13340 isopentenyl-diphosphate Delta-isomerase insig. 36 57
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07605 isopentenyl-diphosphate delta-isomerase sig. 27 86
  Rahnella sp. WP5 EX31_RS02215 isopentenyl-diphosphate Delta-isomerase insig. 30 51
  Klebsiella michiganensis M5al BWI76_RS23790 isopentenyl-diphosphate Delta-isomerase no data 32 53
o Pectobacterium carotovorum WPP14 HER17_RS13245 isopentenyl-diphosphate Delta-isomerase insig. 28 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0501 ADP-ribose pyrophosphatase insig. 42 40
  Castellaniella sp019104865 MT123 ABCV34_RS14635 Nudix family hydrolase insig. 38 50
  Enterobacter asburiae PDN3 EX28DRAFT_2940 isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) insig. 30 57
  Azospirillum brasilense Sp245 AZOBR_RS02845 NTP pyrophosphohydrolase no data 42 46
  Dickeya dadantii 3937 DDA3937_RS14390 NUDIX hydrolase YfcD insig. 30 90
  Pantoea sp. MT58 IAI47_06315 NUDIX hydrolase YfcD insig. 34 53
  Dickeya dianthicola 67-19 HGI48_RS14360 NUDIX hydrolase YfcD insig. 30 90
  Dickeya dianthicola ME23 DZA65_RS15290 NUDIX hydrolase YfcD insig. 30 90
  Acidovorax sp. GW101-3H11 Ac3H11_1722 NTP pyrophosphohydrolases including oxidative damage repair enzymes insig. 29 54
  Castellaniella sp019104865 MT123 ABCV34_RS13280 NUDIX domain-containing protein insig. 41 35
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13540 (deoxy)nucleoside triphosphate pyrophosphohydrolase insig. 39 43
  Vibrio cholerae E7946 ATCC 55056 CSW01_12120 8-oxo-dGTP diphosphatase MutT insig. 34 63
  Azospirillum sp. SherDot2 MPMX19_00121 CTP pyrophosphohydrolase insig. 44 37
  Ralstonia solanacearum PSI07 RPSI07_RS19950 NUDIX hydrolase insig. 29 66
  Pseudomonas stutzeri RCH2 Psest_2078 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding insig. 28 66
  Variovorax sp. OAS795 ABID97_RS07885 NUDIX domain-containing protein insig. 24 75
  Escherichia coli ECOR27 NOLOHH_14630 nudI nucleoside triphosphatase NudI insig. 38 34
  Escherichia coli ECRC62 BNILDI_13545 nudI nucleoside triphosphatase NudI cofit 38 34
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1856 Pyrimidine deoxynucleoside triphosphate (dYTP) pyrophosphohydrolase YfoO insig. 38 34
  Enterobacter asburiae PDN3 EX28DRAFT_1761 NUDIX domain insig. 36 42
  Klebsiella michiganensis M5al BWI76_RS11620 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase no data 33 69
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS13270 NUDIX hydrolase insig. 28 64
  Ralstonia solanacearum UW163 UW163_RS00300 NUDIX hydrolase insig. 28 64
  Escherichia coli BL21 ECD_02177 nucleoside triphosphatase insig. 38 34
  Escherichia coli BW25113 b2251 yfaO predicted NUDIX hydrolase (NCBI) insig. 38 34
  Shewanella oneidensis MR-1 SO0410 mutT mutator mutT protein (NCBI ptt file) insig. 31 55
  Escherichia fergusonii Becca EFB2_01605 Nucleoside triphosphatase NudI insig. 38 34
  Escherichia coli ECOR38 HEPCGN_22220 nudI nucleoside triphosphatase NudI insig. 38 34
  Escherichia coli ECRC100 OKFHMN_23005 nudI nucleoside triphosphatase NudI insig. 38 34
  Escherichia coli ECRC101 MCAODC_14045 nudI nucleoside triphosphatase NudI insig. 38 34
  Escherichia coli ECRC102 NIAGMN_20775 nudI nucleoside triphosphatase NudI insig. 38 34
  Escherichia coli ECRC98 JDDGAC_26970 nudI nucleoside triphosphatase NudI cofit 38 34
  Escherichia coli ECRC99 KEDOAH_05190 nudI nucleoside triphosphatase NudI no data 38 34
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01460 Nucleoside triphosphatase NudI insig. 38 34
  Escherichia coli Nissle 1917 ECOLIN_RS13115 nucleoside triphosphatase NudI no data 38 34
  Ralstonia solanacearum GMI1000 RS_RS09465 DUF4743 domain-containing protein insig. 43 30
  Klebsiella michiganensis M5al BWI76_RS20020 nucleoside triphosphatase NudI insig. 38 34
  Ralstonia sp. UNC404CL21Col ABZR87_RS14240 DUF4743 domain-containing protein insig. 30 50
  Variovorax sp. SCN45 GFF6024 Pyrophosphatase, MutT/nudix family (EC 3.6.1.-) insig. 25 63
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01973 CTP pyrophosphohydrolase insig. 38 38
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3599 ADP-ribose pyrophosphatase sig. 44 34
  Ralstonia solanacearum GMI1000 RS_RS04065 NUDIX hydrolase insig. 28 64
  Erwinia tracheiphila SCR3 LU632_RS07890 yfcD NUDIX hydrolase YfcD insig. 27 82
  Enterobacter sp. TBS_079 MPMX20_03526 Nucleoside triphosphatase NudI insig. 38 34
  Pectobacterium carotovorum WPP14 HER17_RS07070 NUDIX hydrolase YfcD cofit 30 90
  Escherichia coli ECOR27 NOLOHH_17365 nudG CTP pyrophosphohydrolase insig. 38 38