| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas stutzeri RCH2 | Psest_0893 | | Transcriptional regulator | insig. | 100 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS36080 | | LysR family transcriptional regulator | insig. | 53 | 98 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS01470 | | LysR family transcriptional regulator | insig. | 51 | 97 |
| o | Alteromonas macleodii MIT1002 | MIT1002_02337 | | D-malate degradation protein R | insig. | 49 | 96 |
| o | Variovorax sp. SCN45 | GFF4613 | | Transcriptional regulator, LysR family | no data | 51 | 95 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS16285 | | LysR family transcriptional regulator | insig. | 46 | 97 |
| o | Acinetobacter radioresistens SK82 | MPMX26_00859 | | HTH-type transcriptional regulator DmlR | insig. | 46 | 97 |
| o | Dechlorosoma suillum PS | Dsui_0426 | | transcriptional regulator | insig. | 48 | 99 |
| o | Variovorax sp. OAS795 | ABID97_RS05840 | | LysR substrate-binding domain-containing protein | sig. | 53 | 95 |
| o | Klebsiella michiganensis M5al | BWI76_RS21740 | | transcriptional regulator, LysR family protein | insig. | 35 | 95 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS37730 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| | Variovorax sp. SCN45 | GFF2722 | | Transcriptional regulator, LysR family | insig. | 34 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_006367 | | DNA-binding transcriptional LysR family regulator | insig. | 35 | 92 |
| | Pseudomonas sp. SVBP6 | COO64_RS19755 | | LysR substrate-binding domain-containing protein | insig. | 34 | 97 |
| | Dechlorosoma suillum PS | Dsui_2115 | | transcriptional regulator | insig. | 32 | 98 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17075 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| o | Ralstonia solanacearum UW163 | UW163_RS18465 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_1293 | | Transcriptional regulator, LysR family | insig. | 32 | 94 |
| | Variovorax sp. SCN45 | GFF7344 | | Transcriptional regulator, LysR family | insig. | 31 | 94 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16575 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas orientalis W4I3 | QF045_RS09170 | | LysR substrate-binding domain-containing protein | insig. | 34 | 96 |
| | Pseudomonas segetis P6 | ACVTMO_RS17005 | | LysR substrate-binding domain-containing protein | insig. | 31 | 98 |
| | Pseudomonas sp. S08-1 | OH686_18145 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 33 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS06390 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS06390 | | LysR family transcriptional regulator | cofit | 34 | 96 |
| | Pseudomonas sp. BP01 | JOY50_RS23715 | | LysR substrate-binding domain-containing protein | insig. | 33 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS22550 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| | Pseudomonas simiae WCS417 | PS417_06325 | | LysR family transcriptional regulator | strong | 34 | 94 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42300 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 32 | 97 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1172.1 | | Transcriptional regulator | insig. | 33 | 98 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4683 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 32 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18535 | | glutathione-dependent formaldehyde neutralization regulator | insig. | 32 | 97 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 33 | 98 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 33 | 98 |
| | Pseudomonas sp. DMC3 | GFF2076 | | HTH-type transcriptional regulator DmlR | insig. | 33 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_989 | | Transcriptional regulator, LysR family | insig. | 34 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3045 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | strong | 33 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14825 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 32 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3107 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 32 | 96 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS01720 | | LysR family transcriptional regulator | insig. | 31 | 94 |
| | Pseudomonas putida KT2440 | PP_1615 | | Transcriptional regulator, LysR family | strong | 32 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_05925 | | LysR family transcriptional regulator | strong | 32 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01435 | | HTH-type transcriptional regulator DmlR | cofit | 33 | 96 |
| | Rahnella sp. WP5 | EX31_RS15470 | | LysR family transcriptional regulator | insig. | 33 | 91 |
| | Pseudomonas sp. RS175 | PFR28_00419 | | HTH-type transcriptional regulator DmlR | strong | 32 | 96 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS20745 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| | Pseudomonas stutzeri RCH2 | Psest_1182 | | Transcriptional regulator | strong | 31 | 98 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18390 | | LysR family transcriptional regulator | strong | 30 | 96 |
| | Ralstonia solanacearum UW163 | UW163_RS20740 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS19825 | | LysR family transcriptional regulator | insig. | 30 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05160 | | LysR family transcriptional regulator | cofit | 30 | 96 |
| | Pantoea sp. MT58 | IAI47_01190 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19415 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37940 | | LysR family transcriptional regulator | insig. | 34 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00019 | | transcriptional regulator, LysR family | insig. | 33 | 93 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37920 | | LysR family transcriptional regulator | insig. | 31 | 98 |
| | Ralstonia solanacearum GMI1000 | RS_RS22475 | | LysR family transcriptional regulator | strong | 30 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS13100 | | LysR family transcriptional regulator | sig. | 31 | 95 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS03175 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| | Ralstonia solanacearum UW163 | UW163_RS10550 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| | Shewanella oneidensis MR-1 | SOA0165 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 31 | 95 |
| | Shewanella sp. ANA-3 | Shewana3_1836 | | LysR family transcriptional regulator (RefSeq) | insig. | 30 | 93 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2945 | | transcriptional regulator, LysR family | insig. | 33 | 94 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2945 | | transcriptional regulator, LysR family | insig. | 33 | 94 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 27 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 27 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS01525 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Shewanella oneidensis MR-1 | SO2053 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 30 | 93 |
| | Dickeya dianthicola 67-19 | HGI48_RS08180 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2673 | | Probable transcription regulator protein of MDR efflux pump cluster | insig. | 30 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20090 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03187 | | transcriptional regulator, LysR family | sig. | 30 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS08655 | | LysR family transcriptional regulator | sig. | 29 | 98 |
| | Pseudomonas orientalis W4I3 | QF045_RS20290 | | LysR family transcriptional regulator | cofit | 31 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS16435 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| | Shewanella amazonensis SB2B | Sama_0005 | | LysR, substrate-binding (RefSeq) | insig. | 32 | 95 |
| | Shewanella loihica PV-4 | Shew_2278 | | LysR family transcriptional regulator (RefSeq) | insig. | 29 | 96 |
| | Agrobacterium fabrum C58 | Atu2480 | | transcriptional regulator, LysR family | strong | 29 | 95 |
| | Azospirillum brasilense Sp245 | AZOBR_RS16520 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS03880 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| | Caulobacter crescentus NA1000 | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 30 | 96 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02602 | | LysR-family transcriptional regulator | insig. | 30 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS22500 | | transcriptional regulator | sig. | 29 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05865 | | transcriptional regulator, LysR family | insig. | 29 | 96 |
| | Rahnella sp. WP5 | EX31_RS11970 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| | Klebsiella michiganensis M5al | BWI76_RS12615 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Dickeya dianthicola 67-19 | HGI48_RS12725 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Pseudomonas sp. DMC3 | GFF4908 | | HTH-type transcriptional regulator PgrR | cofit | 29 | 94 |
| | Klebsiella michiganensis M5al | BWI76_RS12630 | | regulatory protein, LysR:LysR, substrate-binding protein | sig. | 31 | 93 |
| | Paraburkholderia graminis OAS925 | ABIE53_004109 | | LysR family transcriptional regulator for bpeEF and oprC | strong | 30 | 100 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF136 | | Transcriptional regulator, LysR family | no data | 29 | 98 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_20500 | | LysR family transcriptional regulator | insig. | 29 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS02935 | | LysR family transcriptional regulator | insig. | 28 | 96 |
| | Ralstonia solanacearum GMI1000 | RS_RS08735 | | LysR family transcriptional regulator | sig. | 31 | 98 |
| | Agrobacterium fabrum C58 | Atu4367 | | LysR family transcriptional regulator | insig. | 30 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17775 | | LysR family transcriptional regulator | insig. | 30 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_14620 | | LysR family transcriptional regulator | sig. | 29 | 95 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS08570 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| | Ralstonia solanacearum UW163 | UW163_RS05040 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS36620 | | LysR family transcriptional regulator | insig. | 31 | 95 |