Homologs of GFF4948 from Variovorax sp. SCN45

ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose)
SEED: Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB
KEGG: ribose transport system substrate-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4948 ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) insig. 100 100
o Sinorhizobium meliloti 1021 SM_b20504 sugar ABC transporter substrate-binding protein insig. 75 90
o Agrobacterium fabrum C58 Atu3881 sugar ABC transporter substrate-binding protein insig. 56 97
  Rhizobium sp. OAE497 ABIE40_RS02220 ABC transporter substrate-binding protein sig. 29 67
  Sinorhizobium meliloti 1021 SMc02774 ABC transporter substrate-binding protein insig. 32 67
  Burkholderia phytofirmans PsJN BPHYT_RS20750 LacI family transcriptional regulator insig. 30 64
  Escherichia coli BL21 ECD_02650 D-ribose-binding periplasmic protein insig. 30 68
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00428 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 29 64
  Herbaspirillum seropedicae SmR1 HSERO_RS05260 ABC transporter for L-fucose, substrate-binding component (from data) sig. 28 78
  Paraburkholderia sabiae LMG 24235 QEN71_RS38610 ABC transporter substrate-binding protein insig. 29 64
  Paraburkholderia graminis OAS925 ABIE53_002828 ribose transport system substrate-binding protein insig. 29 69
  Xanthobacter sp. DMC5 GFF1438 Ribose import binding protein RbsB insig. 26 64
  Escherichia coli BL21 ECD_03960 D-allose ABC transporter periplasmic binding protein insig. 25 72
  Escherichia coli BW25113 b4088 alsB D-allose transporter subunit (NCBI) insig. 25 72
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02713 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 28 53
  Escherichia fergusonii Becca EFB2_04494 D-allose-binding periplasmic protein insig. 25 72
  Escherichia coli ECOR38 HEPCGN_11345 alsB D-allose transporter substrate-binding protein insig. 25 72
  Escherichia coli Nissle 1917 ECOLIN_RS23680 D-allose transporter substrate-binding protein insig. 25 72
  Escherichia coli ECOR27 NOLOHH_04975 alsB D-allose transporter substrate-binding protein insig. 25 72
  Agrobacterium fabrum C58 Atu2817 ABC transporter, substrate binding protein (ribose) strong 26 72
  Klebsiella michiganensis M5al BWI76_RS02165 D-allose transporter subunit insig. 25 72
o Rhodospirillum rubrum S1H Rru_A1365 ribose ABC transporter, periplasmic binding protein (NCBI) no data 28 94
  Enterobacter sp. TBS_079 MPMX20_00308 D-allose-binding periplasmic protein cofit 26 71
  Dinoroseobacter shibae DFL-12 Dshi_0531 ABC sugar transporter, periplasmic ligand binding protein (RefSeq) insig. 25 61
  Burkholderia phytofirmans PsJN BPHYT_RS27195 LacI family transcriptional regulator strong 26 57
  Ralstonia sp. UNC404CL21Col ABZR87_RS12035 ABC transporter substrate-binding protein insig. 25 67
  Paraburkholderia sabiae LMG 24235 QEN71_RS20215 autoinducer 2 ABC transporter substrate-binding protein insig. 29 53
  Cupriavidus basilensis FW507-4G11 RR42_RS32885 LacI family transcriptional regulator insig. 26 61
  Paraburkholderia sabiae LMG 24235 QEN71_RS11420 ABC transporter substrate-binding protein insig. 25 69
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03378 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 26 57
  Rhizobium sp. OAE497 ABIE40_RS24755 D-ribose ABC transporter substrate-binding protein insig. 26 62
  Sinorhizobium meliloti 1021 SM_b20484 sugar ABC transporter substrate-binding protein insig. 29 66
  Azospirillum sp. SherDot2 MPMX19_03310 Ribose import binding protein RbsB insig. 26 71
  Paraburkholderia graminis OAS925 ABIE53_005429 ribose transport system substrate-binding protein insig. 26 56
  Paraburkholderia graminis OAS925 ABIE53_003887 ribose transport system substrate-binding protein sig. 27 59
  Bifidobacterium breve UCC2003 BBR_RS17760 D-ribose ABC transporter substrate-binding protein strong 27 50
  Sinorhizobium meliloti 1021 SM_b21377 sugar uptake ABC transporter substrate-binding protein precursor strong 26 50
  Agrobacterium fabrum C58 Atu4320 ribose ABC transporter substrate-binding protein sig. 26 58
  Escherichia coli ECOR27 NOLOHH_01825 rbsB LacI family transcriptional regulator insig. 26 70
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03349 Autoinducer 2-binding protein LsrB insig. 26 70
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS19575 D-ribose ABC transporter substrate-binding protein cofit 28 54
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15215 D-ribose ABC transporter substrate-binding protein insig. 26 52
  Escherichia coli ECOR38 HEPCGN_07535 rbsB LacI family transcriptional regulator insig. 26 70
  Escherichia coli ECRC100 OKFHMN_08950 rbsB LacI family transcriptional regulator insig. 26 70
  Escherichia coli ECRC101 MCAODC_28175 rbsB LacI family transcriptional regulator insig. 26 70
  Escherichia coli ECRC102 NIAGMN_07005 rbsB LacI family transcriptional regulator cofit 26 70
  Escherichia coli ECRC98 JDDGAC_12600 rbsB LacI family transcriptional regulator insig. 26 70
  Escherichia coli ECRC99 KEDOAH_19015 rbsB LacI family transcriptional regulator no data 26 70
  Pantoea sp. MT58 IAI47_11815 D-ribose ABC transporter substrate-binding protein insig. 28 54
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01114 deoxynucleoside transporter, substrate-binding component (from data) cofit 28 53
  Burkholderia phytofirmans PsJN BPHYT_RS25795 LacI family transcription regulator no data 26 59
  Paraburkholderia graminis OAS925 ABIE53_002262 simple sugar transport system substrate-binding protein strong 25 59
  Pectobacterium carotovorum WPP14 HER17_RS09335 D-ribose ABC transporter substrate-binding protein cofit 25 62
  Pseudomonas fluorescens SBW25 PFLU_RS19520 substrate-binding domain-containing protein insig. 23 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19520 substrate-binding domain-containing protein insig. 23 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01121 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 27 63
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02705 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 26 59
  Paraburkholderia sabiae LMG 24235 QEN71_RS12600 rhamnose ABC transporter substrate-binding protein strong 24 63
  Azospirillum brasilense Sp245 AZOBR_RS23065 LacI family transcription regulator sig. 26 45
  Paraburkholderia sabiae LMG 24235 QEN71_RS36065 sugar ABC transporter substrate-binding protein insig. 27 56
  Klebsiella pneumoniae MKP103 KDGMDA_11935 LacI family transcriptional regulator insig. 25 84
  Burkholderia phytofirmans PsJN BPHYT_RS35755 LacI family transcription regulator insig. 23 48
  Pseudomonas simiae WCS417 PS417_17735 LacI family transcriptional regulator strong 23 80
  Agrobacterium fabrum C58 Atu4744 sugar ABC transporter substrate-binding protein insig. 28 64
  Paraburkholderia graminis OAS925 ABIE53_001869 ABC-type sugar transport system substrate-binding protein insig. 26 55
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01220 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 24 63
  Klebsiella pneumoniae MKP103 KDGMDA_15520 rhizopine-binding protein insig. 24 64
  Paraburkholderia graminis OAS925 ABIE53_005304 LacI family transcriptional regulator insig. 23 48
  Herbaspirillum seropedicae SmR1 HSERO_RS05315 LacI family transcriptional regulator insig. 26 58
  Paraburkholderia graminis OAS925 ABIE53_003387 ribose transport system substrate-binding protein no data 26 73
  Paraburkholderia graminis OAS925 ABIE53_005700 rhamnose transport system substrate-binding protein strong 24 63
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03507 Ribose import binding protein RbsB insig. 24 63
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03760 transcriptional regulator, LacI family insig. 23 48
  Agrobacterium fabrum C58 Atu3487 sugar ABC transporter substrate-binding protein strong 26 72
  Burkholderia phytofirmans PsJN BPHYT_RS25830 sugar ABC transporter substrate-binding protein insig. 25 66
  Burkholderia phytofirmans PsJN BPHYT_RS28200 sugar ABC transporter substrate-binding protein insig. 24 63
  Paraburkholderia sabiae LMG 24235 QEN71_RS33795 sugar ABC transporter substrate-binding protein insig. 22 80
  Herbaspirillum seropedicae SmR1 HSERO_RS05095 LacI family transcription regulator strong 28 58
  Rahnella sp. WP5 EX31_RS17415 autoinducer 2 ABC transporter substrate-binding protein insig. 28 55
  Azospirillum sp. SherDot2 MPMX19_03868 Xylitol-binding protein insig. 25 54
  Variovorax sp. SCN45 GFF1454 Transcriptional regulator, LacI/PurR family insig. 24 51
  Pantoea sp. MT58 IAI47_07555 sugar ABC transporter substrate-binding protein insig. 23 55
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01450 sugar ABC transporter substrate-binding protein strong 23 55
  Agrobacterium fabrum C58 Atu3821 ribose ABC transporter substrate-binding protein insig. 27 46
  Vibrio cholerae E7946 ATCC 55056 CSW01_14660 ribose ABC transporter substrate-binding protein RbsB insig. 26 59
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17440 substrate-binding domain-containing protein cofit 26 59
  Rhizobium sp. OAE497 ABIE40_RS23540 substrate-binding domain-containing protein cofit 28 57
  Paraburkholderia graminis OAS925 ABIE53_006292 ribose transport system substrate-binding protein sig. 26 66
  Pantoea sp. MT58 IAI47_11145 D-ribose ABC transporter substrate-binding protein insig. 26 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04150 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 26 73
  Variovorax sp. OAS795 ABID97_RS11790 LacI family DNA-binding transcriptional regulator insig. 26 48
  Burkholderia phytofirmans PsJN BPHYT_RS16065 LacI family transcriptional regulator insig. 24 80
  Pseudomonas fluorescens SBW25 PFLU_RS18175 sugar ABC transporter substrate-binding protein insig. 24 54
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18175 sugar ABC transporter substrate-binding protein insig. 24 54
  Dickeya dadantii 3937 DDA3937_RS02175 D-ribose ABC transporter substrate-binding protein insig. 24 71
  Pseudomonas orientalis W4I3 QF045_RS19240 substrate-binding domain-containing protein insig. 22 80
  Escherichia coli ECOR38 HEPCGN_16540 sugar ABC transporter insig. 25 55
  Azospirillum sp. SherDot2 MPMX19_03760 Ribose import binding protein RbsB insig. 25 59
  Burkholderia phytofirmans PsJN BPHYT_RS30855 sugar ABC transporter substrate-binding protein insig. 23 95
  Burkholderia phytofirmans PsJN BPHYT_RS01825 sugar ABC transporter substrate-binding protein insig. 24 55