| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF4410 | | Transcriptional regulator, LysR family | insig. | 100 | 100 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4172 | | Transcriptional regulator, LysR family | insig. | 87 | 100 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_12805 | | LysR family transcriptional regulator | insig. | 86 | 99 |
| o | Ralstonia solanacearum GMI1000 | RS_RS12975 | | D-alanyl-D-alanine endopeptidase | insig. | 78 | 100 |
| o | Shewanella sp. ANA-3 | Shewana3_1278 | | LysR family transcriptional regulator (RefSeq) | insig. | 78 | 99 |
| o | Dickeya dianthicola 67-19 | HGI48_RS03945 | | LysR family transcriptional regulator | insig. | 75 | 99 |
| o | Dickeya dadantii 3937 | DDA3937_RS03980 | | LysR family transcriptional regulator | insig. | 70 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3457 | | Transcriptional regulator, LysR family | insig. | 66 | 92 |
| | Variovorax sp. SCN45 | GFF6583 | | Transcriptional regulator, LysR family | insig. | 70 | 94 |
| | Dickeya dianthicola 67-19 | HGI48_RS08400 | | LysR family transcriptional regulator | insig. | 70 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4431 | | Transcriptional regulator, LysR family | insig. | 70 | 96 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS00135 | | LysR substrate-binding domain-containing protein | insig. | 64 | 95 |
| | Variovorax sp. SCN45 | GFF4853 | | Transcriptional regulator, LysR family | insig. | 66 | 96 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1295.1 | | Transcriptional regulator, LysR family | insig. | 51 | 92 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1988 | | transcriptional regulator, LysR family | insig. | 35 | 91 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3313 | | transcriptional regulator, LysR family (TIGR) | insig. | 36 | 92 |
| | Variovorax sp. SCN45 | GFF286 | | Transcriptional regulator, LysR family | insig. | 38 | 77 |
| | Serratia liquefaciens MT49 | IAI46_07130 | | LysR family transcriptional regulator | insig. | 34 | 86 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF103 | | LysR family transcriptional regulator YnfL | insig. | 36 | 77 |
| | Enterobacter sp. TBS_079 | MPMX20_02062 | | Hca operon transcriptional activator HcaR | sig. | 35 | 78 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS13490 | | LysR family transcriptional regulator | insig. | 34 | 77 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_21225 | | LysR family transcriptional regulator | insig. | 36 | 78 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1494 | | Transcriptional regulator | insig. | 35 | 78 |
| | Escherichia fergusonii Becca | EFB2_02397 | | Hca operon transcriptional activator HcaR | insig. | 34 | 78 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS08910 | | LysR family transcriptional regulator | no data | 34 | 78 |
| | Bosea sp. OAE506 | ABIE41_RS20660 | | LysR substrate-binding domain-containing protein | insig. | 36 | 77 |
| | Escherichia coli BL21 | ECD_01564 | | LysR family putative transcriptional regulator | no data | 34 | 78 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02131 | | Hca operon transcriptional activator HcaR | insig. | 34 | 78 |
| | Escherichia coli BW25113 | b1595 | ynfL | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 34 | 78 |
| | Escherichia coli ECOR27 | NOLOHH_18240 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 34 | 78 |
| | Escherichia coli ECOR38 | HEPCGN_06110 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 34 | 78 |
| | Escherichia coli ECRC100 | OKFHMN_27735 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 34 | 78 |
| | Escherichia coli ECRC101 | MCAODC_17675 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 34 | 78 |
| | Escherichia coli ECRC102 | NIAGMN_00340 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 34 | 78 |
| | Escherichia coli ECRC62 | BNILDI_17030 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | cofit | 34 | 78 |
| | Escherichia coli ECRC98 | JDDGAC_02325 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 34 | 78 |
| | Escherichia coli ECRC99 | KEDOAH_00370 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 34 | 78 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11960 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27380 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50155 | | LysR family transcriptional regulator | sig. | 35 | 95 |
| | Pantoea sp. MT58 | IAI47_09745 | | LysR family transcriptional regulator | insig. | 35 | 78 |
| | Erwinia amylovora T8 | OLJFJH_14280 | | LysR family transcriptional regulator | insig. | 36 | 78 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS06410 | | LysR family transcriptional regulator | insig. | 35 | 78 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03905 | | hypothetical protein | insig. | 42 | 63 |
| | Klebsiella michiganensis M5al | BWI76_RS15960 | | LysR family transcriptional regulator | insig. | 36 | 78 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10740 | | LysR family transcriptional regulator | insig. | 34 | 78 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08630 | | LysR family transcriptional regulator | cofit | 33 | 92 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS07095 | | LysR family transcriptional regulator | insig. | 31 | 91 |
| | Pseudomonas stutzeri RCH2 | Psest_3707 | | Transcriptional regulator | insig. | 33 | 94 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1784 | | Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) | insig. | 33 | 98 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS10965 | | LysR family transcriptional regulator | insig. | 34 | 92 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28390 | | LysR family transcriptional regulator | sig. | 34 | 92 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS51110 | | LysR family transcriptional regulator | insig. | 34 | 92 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS20350 | | LysR substrate-binding domain-containing protein | sig. | 33 | 90 |
| | Pseudomonas putida KT2440 | PP_5071 | | putative DNA-binding transcriptional regulator | insig. | 32 | 91 |
| | Pseudomonas sp. BP01 | JOY50_RS09345 | | LysR family transcriptional regulator | insig. | 32 | 91 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS17450 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS21830 | | transcriptional regulator | insig. | 33 | 78 |
| | Paraburkholderia graminis OAS925 | ABIE53_006314 | | DNA-binding transcriptional LysR family regulator | sig. | 33 | 77 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28030 | | hypothetical protein | insig. | 32 | 93 |
| | Dickeya dadantii 3937 | DDA3937_RS10670 | | LysR family transcriptional regulator | insig. | 33 | 78 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS12870 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS05585 | | LysR substrate-binding domain-containing protein | sig. | 34 | 78 |
| | Pseudomonas sp. BP01 | JOY50_RS26665 | | LysR family transcriptional regulator | insig. | 35 | 93 |
| | Dickeya dianthicola 67-19 | HGI48_RS10670 | | LysR family transcriptional regulator | insig. | 33 | 78 |
| | Dickeya dianthicola ME23 | DZA65_RS11140 | | LysR family transcriptional regulator | insig. | 33 | 78 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06353 | | transcriptional regulator, LysR family | insig. | 34 | 77 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1786 | | LysR family transcriptional regulator YnfL | insig. | 33 | 78 |
| | Pseudomonas segetis P6 | ACVTMO_RS20230 | | LysR family transcriptional regulator | insig. | 33 | 83 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS02635 | | LysR family transcriptional regulator | insig. | 31 | 84 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23510 | | transcriptional regulator | insig. | 36 | 78 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2033 | | Xanthosine operon regulatory protein XapR, LysR family | insig. | 34 | 84 |
| | Klebsiella michiganensis M5al | BWI76_RS20595 | | LysR family transcriptional regulator | insig. | 34 | 84 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS18300 | | LysR family transcriptional regulator | insig. | 33 | 84 |
| | Pseudomonas sp. RS175 | PFR28_05019 | | HTH-type transcriptional regulator BenM | insig. | 32 | 91 |
| | Acinetobacter baumannii LAC-4 | RR41_RS16950 | | DNA-binding transcriptional regulator HcaR | insig. | 31 | 93 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS11345 | | LysR family transcriptional regulator | insig. | 36 | 83 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0421 | | transcriptional regulator, LysR family | insig. | 34 | 78 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0421 | | transcriptional regulator, LysR family | insig. | 34 | 78 |
| | Pseudomonas putida KT2440 | PP_3179 | | Transcriptional regulator, LysR family | sig. | 34 | 91 |
| | Enterobacter sp. TBS_079 | MPMX20_03298 | | Hca operon transcriptional activator HcaR | insig. | 34 | 84 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3735 | | LysR family transcriptional regulator YnfL | insig. | 32 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01661 | | DNA-binding transcriptional regulator, LysR family | insig. | 31 | 93 |
| | Sinorhizobium meliloti 1021 | SM_b20683 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01073 | | DNA-binding transcriptional regulator, LysR family | insig. | 32 | 80 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1530 | | LysR family transcriptional regulator YnfL | insig. | 32 | 91 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_09290 | | LysR family transcriptional regulator | insig. | 32 | 91 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5758 | | Transcriptional regulators, LysR family | insig. | 31 | 94 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS17870 | | LysR family transcriptional regulator | strong | 35 | 83 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS18015 | | LysR family transcriptional regulator | strong | 35 | 83 |
| | Serratia liquefaciens MT49 | IAI46_11680 | | LysR family transcriptional regulator | insig. | 33 | 83 |
| | Xanthobacter sp. DMC5 | GFF2917 | | Hca operon transcriptional activator HcaR | insig. | 33 | 86 |
| | Pseudomonas simiae WCS417 | PS417_02020 | | LysR family transcriptional regulator | insig. | 32 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30315 | | LysR family transcriptional regulator | insig. | 32 | 77 |
| | Escherichia coli ECOR38 | HEPCGN_21440 | | LysR family transcriptional regulator | insig. | 32 | 91 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS21255 | | LysR family transcriptional regulator | strong | 32 | 92 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS16750 | | LysR family transcriptional regulator | insig. | 34 | 80 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS19765 | | LysR family transcriptional regulator | insig. | 35 | 83 |
| | Ralstonia solanacearum UW163 | UW163_RS19410 | | LysR family transcriptional regulator | insig. | 35 | 83 |
| | Sphingobium sp. HT1-2 | GFF3022 | | Transcriptional regulator, LysR family | cofit | 35 | 83 |