Homologs of Psest_4156 from Pseudomonas stutzeri RCH2

DNA-binding winged-HTH domains

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_4156 DNA-binding winged-HTH domains insig. 100 100
  Sinorhizobium meliloti 1021 SMc01198 hypothetical protein insig. 35 39
  Pseudomonas simiae WCS417 PS417_10355 transcriptional regulator insig. 36 38
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14940 winged helix-turn-helix domain-containing protein cofit 32 47
  Rhodanobacter denitrificans MT42 LRK55_RS14655 winged helix-turn-helix domain-containing protein cofit 32 47
  Vibrio cholerae E7946 ATCC 55056 CSW01_05025 transcriptional regulator insig. 41 27
  Erwinia amylovora T8 OLJFJH_07890 Transcriptional regulator insig. 35 41
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03403 Predicted ATPase insig. 31 37
  Pseudomonas sp. DMC3 GFF2809 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 42 24
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2932 Serine/threonine protein kinase insig. 35 41
  Shewanella loihica PV-4 Shew_0358 transcriptional regulator, CadC (RefSeq) insig. 37 32
  Paraburkholderia sabiae LMG 24235 QEN71_RS30635 winged helix-turn-helix domain-containing protein insig. 34 31
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2715 Adenylate cyclase (EC 4.6.1.1) insig. 28 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5712 Adenylate cyclase (EC 4.6.1.1) / Guanylate cyclase (EC 4.6.1.2) insig. 37 34
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01106 Predicted ATPase no data 31 33
  Kangiella aquimarina DSM 16071 B158DRAFT_2206 DNA-binding winged-HTH domains insig. 44 22
  Serratia liquefaciens MT49 IAI46_15595 winged helix-turn-helix domain-containing protein insig. 35 26
  Shewanella sp. ANA-3 Shewana3_0499 transcriptional regulator (RefSeq) cofit 29 61
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14620 Transcriptional regulator no data 32 31
  Erwinia tracheiphila SCR3 LU632_RS20485 transcriptional regulator no data 32 31
  Klebsiella pneumoniae MKP103 KDGMDA_10900 transcriptional regulator insig. 36 34
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4742 Type III secretion transcriptional activator HilA cofit 40 27
  Lysobacter sp. OAE881 ABIE51_RS10700 winged helix-turn-helix domain-containing protein insig. 44 26
  Pseudomonas putida KT2440 PP_5241 DNA-binding response regulator, LuxR family sig. 42 24
  Shewanella oneidensis MR-1 SO0490 transcriptional regulator (NCBI ptt file) insig. 39 27
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3868 Disease resistance protein / Tetratricopeptide repeat-containing protein insig. 36 32
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2450 Transcriptional activator of cad operon insig. 24 41
  Pseudomonas orientalis W4I3 QF045_RS19660 winged helix-turn-helix domain-containing protein insig. 37 33
  Burkholderia phytofirmans PsJN BPHYT_RS33130 transcriptional regulator insig. 37 26
  Pseudomonas sp. DMC3 GFF933 hypothetical protein cofit 34 45
  Shewanella oneidensis MR-1 SO1712 transcriptional regulator, putative (NCBI ptt file) insig. 26 38
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS17855 winged helix-turn-helix domain-containing protein insig. 46 22
  Klebsiella michiganensis M5al BWI76_RS02405 CadC family transcriptional regulator cofit 36 34
  Pseudomonas segetis P6 MPMX49_01858 hypothetical protein insig. 31 36
  Klebsiella michiganensis M5al BWI76_RS07180 transcriptional regulator CadC insig. 31 41
  Pseudomonas fluorescens FW300-N2E3 AO353_28480 CadC-family transcriptional regulator insig. 29 35
  Escherichia coli BW25113 b4133 cadC DNA-binding transcriptional activator (NCBI) sig. 34 42
  Paraburkholderia graminis OAS925 ABIE53_002254 putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein insig. 32 26
  Klebsiella pneumoniae MKP103 KDGMDA_15465 lysine decarboxylation/transport transcriptional activator CadC insig. 44 19
  Pseudomonas fluorescens SBW25 PFLU_RS18085 helix-turn-helix transcriptional regulator insig. 34 38
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18085 helix-turn-helix transcriptional regulator insig. 34 38
  Pseudomonas simiae WCS417 PS417_16115 transcriptional regulator insig. 38 30
  Paraburkholderia sabiae LMG 24235 QEN71_RS37415 winged helix-turn-helix domain-containing protein insig. 34 26
  Escherichia coli BL21 ECD_04004 cadBA operon transcriptional activator cofit 34 42
  Escherichia coli ECOR27 NOLOHH_04730 cadC lysine decarboxylation/transport transcriptional activator CadC insig. 34 42
  Escherichia coli ECRC100 OKFHMN_12465 cadC lysine decarboxylation/transport transcriptional activator CadC cofit 34 42
  Escherichia coli ECRC101 MCAODC_02975 cadC lysine decarboxylation/transport transcriptional activator CadC insig. 34 42
  Escherichia coli ECRC102 NIAGMN_10310 cadC lysine decarboxylation/transport transcriptional activator CadC insig. 34 42
  Escherichia coli ECRC62 BNILDI_06760 cadC lysine decarboxylation/transport transcriptional activator CadC insig. 34 42
  Escherichia coli ECRC98 JDDGAC_16100 cadC lysine decarboxylation/transport transcriptional activator CadC insig. 34 42
  Escherichia coli ECRC99 KEDOAH_15700 cadC lysine decarboxylation/transport transcriptional activator CadC no data 34 42
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03910 Transcriptional activator CadC sig. 34 42
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14310 winged helix-turn-helix domain-containing protein insig. 33 44
  Shewanella sp. ANA-3 Shewana3_2755 transcriptional regulator (RefSeq) insig. 39 28
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02633 hypothetical protein cofit 38 30
  Escherichia fergusonii Becca EFB2_04449 Transcriptional activator CadC insig. 36 28
  Escherichia coli ECOR38 HEPCGN_11100 cadC lysine decarboxylation/transport transcriptional activator CadC insig. 36 28
  Escherichia coli Nissle 1917 ECOLIN_RS23915 lysine decarboxylation/transport transcriptional activator CadC insig. 36 28
  Shewanella amazonensis SB2B Sama_0607 putative transcriptional regulator, CadC (RefSeq) insig. 42 23
  Shewanella oneidensis MR-1 SO1699 transcriptional regulator (NCBI ptt file) insig. 39 28
  Pseudomonas orientalis W4I3 QF045_RS13865 winged helix-turn-helix domain-containing protein insig. 38 30
  Burkholderia phytofirmans PsJN BPHYT_RS30420 transcriptional regulator insig. 32 26
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3869 Disease resistance protein / Tetratricopeptide repeat-containing protein insig. 26 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS38880 winged helix-turn-helix domain-containing protein insig. 32 29
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_252 Disease resistance protein / Tetratricopeptide repeat-containing protein insig. 34 32
  Pseudomonas sp. RS175 PFR28_02650 hypothetical protein insig. 33 33
  Shewanella amazonensis SB2B Sama_0430 putative transcriptional regulator, CadC (RefSeq) insig. 45 22
  Pseudomonas fluorescens SBW25 PFLU_RS22560 transcriptional regulator insig. 41 23
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22560 transcriptional regulator insig. 41 23
  Paraburkholderia graminis OAS925 ABIE53_004787 putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein insig. 39 24
  Rhodospirillum rubrum S1H Rru_A0603 Two component Transcriptional regulator, Winged helix family (NCBI) cofit 38 27
  Serratia liquefaciens MT49 IAI46_05465 winged helix-turn-helix domain-containing protein insig. 37 30
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02632 hypothetical protein insig. 35 31
  Pseudomonas fluorescens FW300-N2C3 AO356_21955 transcriptional regulator insig. 34 32
  Serratia liquefaciens MT49 IAI46_20155 lysine decarboxylation/transport transcriptional activator CadC insig. 34 29
  Sinorhizobium meliloti 1021 SM_b20702 regulatory protein insig. 33 24
  Azospirillum brasilense Sp245 AZOBR_RS13405 putative transcriptional regulatory protein HTH DNA binding domain insig. 31 24
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF338 Putative sensory transducer sig. 29 45
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5919 Signal transduction response regulator / Tetratricopeptide repeat-containing protein insig. 29 36
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00036 DNA-binding winged helix-turn-helix (wHTH) domain-containing protein insig. 27 30
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4215 Adenylate cyclase (EC 4.6.1.1) insig. 25 63
  Xanthobacter sp. DMC5 GFF2342 Phosphate regulon transcriptional regulatory protein PhoB no data 29 43
  Escherichia coli ECOR38 HEPCGN_13965 eilA HilA family transcriptional regulator EilA insig. 38 22
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01093 transcriptional regulator, winged helix family insig. 28 41
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1060 Adenylate cyclase (EC 4.6.1.1) insig. 38 26
  Paraburkholderia sabiae LMG 24235 QEN71_RS37450 winged helix-turn-helix domain-containing protein insig. 37 22
  Pseudomonas fluorescens FW300-N2E3 AO353_22245 transcriptional regulator insig. 38 29
  Vibrio cholerae E7946 ATCC 55056 CSW01_01435 transcriptional regulator CadC cofit 34 24
  Magnetospirillum magneticum AMB-1 AMB_RS06935 phosphate regulon transcriptional regulatory protein PhoB insig. 38 26
  Paraburkholderia graminis OAS925 ABIE53_002241 putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein insig. 35 25
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.153.1 Transcriptional regulator insig. 34 33
  Enterobacter asburiae PDN3 EX28DRAFT_3552 Transcriptional regulatory protein, C terminal insig. 30 37
  Kangiella aquimarina DSM 16071 B158DRAFT_2055 DNA-binding winged-HTH domains insig. 28 41
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5918 Disease resistance protein / Tetratricopeptide repeat-containing protein insig. 35 29
  Pseudomonas fluorescens FW300-N2E3 AO353_22240 transcriptional regulator insig. 33 28
  Bifidobacterium breve UCC2003 BBR_RS11795 DNA-binding response regulator no data 33 33
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10335 transcriptional regulator cofit 32 38
  Enterobacter sp. TBS_079 MPMX20_04654 hypothetical protein insig. 31 28
  Enterobacter asburiae PDN3 EX28DRAFT_1966 DNA-binding winged-HTH domains insig. 26 50
  Lysobacter sp. OAE881 ABIE51_RS10330 winged helix-turn-helix domain-containing protein insig. 31 29