Homologs of Psest_3539 from Pseudomonas stutzeri RCH2

exonuclease SbcD
SEED: Exonuclease SbcD
KEGG: exonuclease SbcD

79 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_3539 exonuclease SbcD sig. 100 100
o Pseudomonas aeruginosa PA14 IKLFDK_02705 exonuclease SbcCD subunit D sig. 74 99
o Pseudomonas aeruginosa MRSN321 DY961_RS25100 exonuclease SbcCD subunit D C-terminal domain-containing protein insig. 74 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS57555 exonuclease SbcCD subunit D C-terminal domain-containing protein insig. 74 99
o Pseudomonas sp. BP01 JOY50_RS16430 exonuclease SbcCD subunit D C-terminal domain-containing protein insig. 66 99
o Pseudomonas putida KT2440 PP_2025 Exonuclease SbcD sig. 67 99
o Pseudomonas fluorescens SBW25 PFLU_RS17135 exonuclease subunit SbcD insig. 67 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17135 exonuclease subunit SbcD insig. 67 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03324 Nuclease SbcCD subunit D cofit 67 99
o Pseudomonas orientalis W4I3 QF045_RS14415 exonuclease SbcCD subunit D C-terminal domain-containing protein insig. 67 98
o Pseudomonas sp. RS175 PFR28_01589 Nuclease SbcCD subunit D insig. 66 99
o Pseudomonas sp. SVBP6 COO64_RS05450 exonuclease SbcCD subunit D C-terminal domain-containing protein insig. 67 99
o Pseudomonas simiae WCS417 PS417_15115 exonuclease SbcD strong 66 98
o Pseudomonas syringae pv. syringae B728a Psyr_1715 Exodeoxyribonuclease I subunit D insig. 65 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1715 Exodeoxyribonuclease I subunit D insig. 65 99
o Pseudomonas fluorescens FW300-N2C3 AO356_24630 exonuclease SbcD insig. 65 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_619 Exonuclease SbcD insig. 65 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3307 Exonuclease SbcD strong 65 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4633 Exonuclease SbcD no data 65 99
o Pseudomonas fluorescens FW300-N2E3 AO353_23680 exonuclease SbcD insig. 65 99
o Pseudomonas sp. DMC3 GFF3025 Nuclease SbcCD subunit D insig. 65 99
o Pseudomonas protegens RBAN4 FABNJH_14235 sbcD Nuclease SbcCD subunit D insig. 66 98
o Acinetobacter baumannii LAC-4 RR41_RS14785 exonuclease SbcCD subunit D no data 46 98
o Acinetobacter radioresistens SK82 MPMX26_02402 Nuclease SbcCD subunit D insig. 45 97
o Azospirillum sp. SherDot2 MPMX19_04315 Nuclease SbcCD subunit D insig. 43 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS09930 exonuclease SbcCD subunit D insig. 41 98
o Azospirillum brasilense Sp245 AZOBR_RS18495 metallophosphatase insig. 42 98
o Bacteroides thetaiotaomicron VPI-5482 BT0244 putative exonuclease (NCBI ptt file) insig. 40 94
o Bacteroides ovatus ATCC 8483 BACOVA_00394 exonuclease SbcCD, D subunit insig. 39 93
o Phocaeicola dorei CL03T12C01 ABI39_RS02545 exonuclease SbcCD subunit D insig. 38 93
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08350 exonuclease SbcCD subunit D C-terminal domain-containing protein insig. 37 93
o Pseudomonas segetis P6 ACVTMO_RS17495 sbcD exonuclease subunit SbcD insig. 38 92
o Erwinia tracheiphila SCR3 LU632_RS18930 sbcD exonuclease subunit SbcD insig. 38 81
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_26120 sbcD exonuclease subunit SbcD sig. 38 81
  Alteromonas macleodii MIT1002 MIT1002_00897 Nuclease SbcCD subunit D insig. 32 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11095 exonuclease sbcCD subunit D insig. 35 83
  Erwinia amylovora T8 OLJFJH_18190 exonuclease subunit SbcD insig. 33 92
  Rahnella sp. WP5 EX31_RS22035 exonuclease subunit SbcD insig. 34 92
  Serratia liquefaciens MT49 IAI46_04770 exonuclease subunit SbcD insig. 33 92
  Escherichia coli Nissle 1917 ECOLIN_RS02405 exonuclease subunit SbcD insig. 32 99
  Dickeya dadantii 3937 DDA3937_RS05420 exonuclease subunit SbcD strong 33 98
  Escherichia fergusonii Becca EFB2_03659 Nuclease SbcCD subunit D insig. 32 99
  Dickeya dianthicola ME23 DZA65_RS05805 exonuclease subunit SbcD insig. 34 92
  Pectobacterium carotovorum WPP14 HER17_RS16045 exonuclease subunit SbcD cofit 34 81
  Dickeya dianthicola 67-19 HGI48_RS05480 exonuclease subunit SbcD insig. 34 92
  Escherichia coli BL21 ECD_00346 exonuclease, dsDNA, ATP-dependent insig. 31 99
  Escherichia coli ECOR27 NOLOHH_01480 sbcD exonuclease subunit SbcD insig. 31 99
  Escherichia coli ECRC100 OKFHMN_08550 sbcD exonuclease subunit SbcD insig. 31 99
  Escherichia coli ECRC101 MCAODC_27775 sbcD exonuclease subunit SbcD insig. 31 99
  Escherichia coli ECRC102 NIAGMN_06605 sbcD exonuclease subunit SbcD cofit 31 99
  Escherichia coli ECRC62 BNILDI_22895 sbcD exonuclease subunit SbcD cofit 31 99
  Escherichia coli ECRC98 JDDGAC_12205 sbcD exonuclease subunit SbcD insig. 31 99
  Escherichia coli ECRC99 KEDOAH_19415 sbcD exonuclease subunit SbcD no data 31 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03278 Nuclease SbcCD subunit D insig. 31 99
  Escherichia coli BW25113 b0398 sbcD exonuclease, dsDNA, ATP-dependent (NCBI) sig. 31 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4294 Exonuclease SbcD insig. 31 99
  Escherichia coli ECOR38 HEPCGN_07190 sbcD exonuclease subunit SbcD insig. 31 99
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS15155 sbcD exonuclease subunit SbcD insig. 37 82
  Pantoea sp. MT58 IAI47_14860 exonuclease subunit SbcD insig. 34 100
  Klebsiella pneumoniae MRSN742743 KFA93_RS03985 sbcD;go_function=exonuclease exonuclease subunit SbcD insig. 34 81
  Klebsiella pneumoniae MKP103 KDGMDA_14300 exonuclease subunit SbcD insig. 35 81
  Enterobacter sp. TBS_079 MPMX20_00985 Nuclease SbcCD subunit D insig. 30 97
  Enterobacter asburiae PDN3 EX28DRAFT_2576 Exodeoxyribonuclease I subunit D (EC 3.1.11.1) cofit 33 81
  Klebsiella michiganensis M5al BWI76_RS06225 exonuclease sbcCD subunit D insig. 33 81
  Cupriavidus basilensis FW507-4G11 RR42_RS35935 exonuclease SbcD insig. 36 98
  Shewanella amazonensis SB2B Sama_1267 exonuclease SbcD, putative (RefSeq) sig. 36 68
  Shewanella oneidensis MR-1 SO2844 exonuclease SbcD, putative (NCBI ptt file) sig. 35 72
  Shewanella sp. ANA-3 Shewana3_2612 exodeoxyribonuclease I subunit D (RefSeq) insig. 34 72
  Shewanella loihica PV-4 Shew_2457 nuclease SbcCD, D subunit (RefSeq) sig. 32 72
  Vibrio cholerae E7946 ATCC 55056 CSW01_16840 exonuclease sbcCD subunit D insig. 32 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1707 exonuclease SbcD insig. 29 74
  Fusobacterium nucleatum SB010 HUW76_07460 exonuclease SbcCD subunit D cofit 21 56
  Desulfovibrio vulgaris Miyazaki F DvMF_2312 metallophosphoesterase (RefSeq) sig. 26 68
  Synechocystis sp000284455 PCC 6803 SGL_RS13370 exonuclease SbcCD subunit D strong 27 62
  Variovorax sp. OAS795 ABID97_RS26675 DNA repair exonuclease insig. 26 65
  Xanthobacter sp. DMC5 GFF1412 hypothetical protein insig. 27 68
  Mycobacterium tuberculosis H37Rv Rv1277 Conserved hypothetical protein sig. 25 71
  Methanococcus maripaludis JJ MMJJ_RS07440 metallophosphoesterase cofit 28 21
  Methanococcus maripaludis S2 MMP_RS06915 metallophosphoesterase strong 28 21