Homologs of PS417_17375 from Pseudomonas simiae WCS417

C4-dicarboxylate ABC transporter
SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter

79 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_17375 C4-dicarboxylate ABC transporter insig. 100 100
o Pseudomonas orientalis W4I3 QF045_RS19035 TRAP transporter small permease insig. 95 100
o Pseudomonas fluorescens SBW25 PFLU_RS19300 TRAP transporter small permease cofit 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19300 TRAP transporter small permease sig. 94 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03769 hypothetical protein insig. 95 100
o Pseudomonas sp. DMC3 GFF1615 hypothetical protein insig. 81 99
o Pseudomonas sp. RS175 PFR28_02439 hypothetical protein strong 83 99
o Pseudomonas fluorescens FW300-N2C3 AO356_23050 C4-dicarboxylate ABC transporter insig. 79 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_486 TRAP-type C4-dicarboxylate transport system, small permease component insig. 81 100
o Pseudomonas sp. BP01 JOY50_RS02040 TRAP transporter small permease insig. 71 100
o Pseudomonas putida KT2440 PP_1168 D-glucuronate / D-galacturonate TRAP transporter, small permease component (from data) strong 71 100
o Pseudomonas syringae pv. syringae B728a Psyr_0899 Tripartite ATP-independent periplasmic transporter, DctQ component insig. 69 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0899 Tripartite ATP-independent periplasmic transporter, DctQ component insig. 69 100
o Pseudomonas segetis P6 ACVTMO_RS20180 TRAP transporter small permease insig. 64 99
o Pseudomonas stutzeri RCH2 Psest_0362 TRAP-type C4-dicarboxylate transport system, small permease component insig. 58 98
o Acidovorax sp. GW101-3H11 Ac3H11_3956 TRAP-type C4-dicarboxylate transport system, small permease component insig. 52 99
o Rahnella sp. WP5 EX31_RS08015 TRAP transporter small permease insig. 47 88
o Pectobacterium carotovorum WPP14 HER17_RS19680 TRAP transporter small permease insig. 45 88
o Pantoea sp. MT58 IAI47_03225 TRAP transporter small permease insig. 47 90
o Enterobacter sp. TBS_079 MPMX20_04348 hypothetical protein sig. 47 93
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16470 TRAP transporter small permease cofit 44 90
o Caulobacter crescentus NA1000 CCNA_01514 C4-dicarboxylate transport system, small permease component strong 35 93
o Caulobacter crescentus NA1000 Δfur CCNA_01514 C4-dicarboxylate transport system, small permease component cofit 35 93
  Bosea sp. OAE506 ABIE41_RS07825 TRAP transporter small permease insig. 31 86
  Sinorhizobium meliloti 1021 SM_b21352 C4-dicarboxylate small membrane transport protein insig. 31 77
  Agrobacterium fabrum C58 Atu3136 ABC transporter permease strong 29 87
  Xanthobacter sp. DMC5 GFF2558 hypothetical protein insig. 28 94
  Lysobacter sp. OAE881 ABIE51_RS02845 TRAP transporter small permease insig. 27 86
  Azospirillum brasilense Sp245 AZOBR_RS30125 C4-dicarboxylate ABC transporter permease insig. 30 86
  Azospirillum brasilense Sp245 AZOBR_RS31405 C4-dicarboxylate ABC transporter permease insig. 30 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.202.1 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 30 85
  Variovorax sp. SCN45 GFF2919 no description insig. 26 86
  Azospirillum sp. SherDot2 MPMX19_05802 hypothetical protein cofit 26 85
  Paraburkholderia graminis OAS925 ABIE53_006501 TRAP-type C4-dicarboxylate transport system permease small subunit insig. 30 55
  Burkholderia phytofirmans PsJN BPHYT_RS24180 C4-dicarboxylate ABC transporter substrate-binding protein no data 29 84
  Pseudomonas segetis P6 ACVTMO_RS12160 TRAP transporter small permease insig. 29 87
  Desulfovibrio vulgaris Hildenborough JW710 DVU0010 TRAP transporter, DctQ family (TIGR) insig. 28 71
  Bosea sp. OAE506 ABIE41_RS06670 TRAP transporter small permease insig. 26 78
  Ralstonia sp. UNC404CL21Col ABZR87_RS21095 TRAP transporter small permease insig. 24 86
  Sinorhizobium meliloti 1021 SM_b21437 C4-dicarboxylate transport system, permease small protein transmembrane insig. 29 84
  Dinoroseobacter shibae DFL-12 Dshi_0957 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 26 80
  Variovorax sp. SCN45 GFF6469 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter insig. 25 73
  Klebsiella michiganensis M5al BWI76_RS24130 small integral C4-dicarboxylate membrane transporter insig. 26 74
  Alteromonas macleodii MIT1002 MIT1002_02427 Neu5Ac permease insig. 22 78
  Sinorhizobium meliloti 1021 SM_b20980 small C4-dicarboxylate uptake permease insig. 24 78
  Azospirillum sp. SherDot2 MPMX19_06068 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM insig. 27 58
  Vibrio cholerae E7946 ATCC 55056 CSW01_08920 C4-dicarboxylate ABC transporter permease insig. 28 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF796 TRAP-type C4-dicarboxylate transport system, small permease component insig. 26 87
  Variovorax sp. OAS795 ABID97_RS19630 TRAP transporter small permease insig. 25 78
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03358 TRAP transporter, DctM subunit insig. 29 48
  Variovorax sp. OAS795 ABID97_RS10335 TRAP transporter small permease sig. 28 73
  Escherichia coli ECOR38 HEPCGN_09410 C4-dicarboxylate ABC transporter permease insig. 28 46
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF703 TRAP-type C4-dicarboxylate transport system, small permease component insig. 26 67
  Dinoroseobacter shibae DFL-12 Dshi_1833 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 24 69
  Escherichia coli ECOR27 NOLOHH_11095 dctM C4-dicarboxylate ABC transporter permease insig. 27 74
  Cellulophaga baltica 18 M666_RS19725 TRAP transporter small permease insig. 26 76
  Pseudomonas aeruginosa PA14 IKLFDK_19465 TRAP transporter permease DctQ insig. 36 34
  Escherichia coli ECOR38 HEPCGN_18530 dctM C4-dicarboxylate ABC transporter permease insig. 27 74
  Bosea sp. OAE506 ABIE41_RS16400 TRAP transporter small permease insig. 27 86
  Pseudomonas stutzeri RCH2 Psest_2123 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) insig. 36 47
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF173 TRAP-type C4-dicarboxylate transport system, small permease component insig. 25 76
  Pseudomonas aeruginosa MRSN321 DY961_RS14025 TRAP transporter small permease sig. 36 34
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1303 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 29 47
  Shewanella oneidensis MR-1 SO3135 C4-dicarboxylate transporter, putative (NCBI ptt file) insig. 27 40
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3628 TRAP-type C4-dicarboxylate transport system, small permease component insig. 22 89
  Fusobacterium nucleatum SB010 HUW76_03970 TRAP transporter small permease strong 24 60
  Acidovorax sp. GW101-3H11 Ac3H11_3228 gluconate TRAP transporter, small permease component (from data) strong 28 78
  Xanthobacter sp. DMC5 GFF430 hypothetical protein insig. 33 37
  Shewanella amazonensis SB2B Sama_2210 alpha-ketoglutarate TRAP transporter, small permease component (from data) strong 27 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05325 TRAP-type C4-dicarboxylate transport system, small permease component no data 33 46
  Marinobacter adhaerens HP15 HP15_4075 TRAP dicarboxylate transporter, DctQ subunit insig. 26 41
  Phaeobacter inhibens DSM 17395 PGA1_c07770 TRAP transporter, subunit DctQ insig. 24 70
  Pseudomonas segetis P6 ACVTMO_RS11795 gluconokinase, GntK/IdnK-type cofit 36 37
  Shewanella sp. ANA-3 Shewana3_1415 tripartite ATP-independent periplasmic transporter DctQ (RefSeq) strong 28 39
  Castellaniella sp019104865 MT123 ABCV34_RS15065 TRAP transporter small permease insig. 27 66
  Burkholderia phytofirmans PsJN BPHYT_RS30450 ABC transporter permease insig. 26 76
  Acidovorax sp. GW101-3H11 Ac3H11_1951 TRAP-type C4-dicarboxylate transport system, small permease component insig. 22 66
  Pseudomonas segetis P6 ACVTMO_RS07585 TRAP transporter small permease insig. 25 67
  Castellaniella sp019104865 MT123 ABCV34_RS12255 TRAP transporter small permease insig. 27 64