Homologs of PS417_17375 from Pseudomonas simiae WCS417

C4-dicarboxylate ABC transporter
SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter

78 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_17375 C4-dicarboxylate ABC transporter insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS19300 TRAP transporter small permease cofit 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19300 TRAP transporter small permease sig. 94 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03769 hypothetical protein insig. 95 100
o Pseudomonas sp. DMC3 GFF1615 hypothetical protein insig. 81 99
o Pseudomonas sp. RS175 PFR28_02439 hypothetical protein strong 83 99
o Pseudomonas fluorescens FW300-N2C3 AO356_23050 C4-dicarboxylate ABC transporter insig. 79 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_486 TRAP-type C4-dicarboxylate transport system, small permease component insig. 81 100
o Pseudomonas sp. BP01 JOY50_RS02040 TRAP transporter small permease insig. 71 100
o Pseudomonas putida KT2440 PP_1168 D-glucuronate / D-galacturonate TRAP transporter, small permease component (from data) strong 71 100
o Pseudomonas syringae pv. syringae B728a Psyr_0899 Tripartite ATP-independent periplasmic transporter, DctQ component insig. 69 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0899 Tripartite ATP-independent periplasmic transporter, DctQ component insig. 69 100
o Pseudomonas segetis P6 MPMX49_04071 hypothetical protein insig. 64 99
o Pseudomonas stutzeri RCH2 Psest_0362 TRAP-type C4-dicarboxylate transport system, small permease component insig. 58 98
o Acidovorax sp. GW101-3H11 Ac3H11_3956 TRAP-type C4-dicarboxylate transport system, small permease component insig. 52 99
o Rahnella sp. WP5 EX31_RS08015 TRAP transporter small permease insig. 47 88
o Pectobacterium carotovorum WPP14 HER17_RS19680 TRAP transporter small permease insig. 45 88
o Pantoea sp. MT58 IAI47_03225 TRAP transporter small permease insig. 47 90
o Enterobacter sp. TBS_079 MPMX20_04348 hypothetical protein sig. 47 93
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16470 TRAP transporter small permease cofit 44 90
o Caulobacter crescentus NA1000 CCNA_01514 C4-dicarboxylate transport system, small permease component strong 35 93
o Caulobacter crescentus NA1000 Δfur CCNA_01514 C4-dicarboxylate transport system, small permease component cofit 35 93
o Bosea sp. OAE506 ABIE41_RS07825 TRAP transporter small permease insig. 31 86
  Sinorhizobium meliloti 1021 SM_b21352 C4-dicarboxylate small membrane transport protein insig. 31 77
o Agrobacterium fabrum C58 Atu3136 ABC transporter permease strong 29 87
o Xanthobacter sp. DMC5 GFF2558 hypothetical protein insig. 28 94
o Lysobacter sp. OAE881 ABIE51_RS02845 TRAP transporter small permease insig. 27 86
o Azospirillum brasilense Sp245 AZOBR_RS30125 C4-dicarboxylate ABC transporter permease insig. 30 86
  Azospirillum brasilense Sp245 AZOBR_RS31405 C4-dicarboxylate ABC transporter permease insig. 30 86
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.202.1 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 30 85
o Variovorax sp. SCN45 GFF2919 no description insig. 26 86
o Azospirillum sp. SherDot2 MPMX19_05802 hypothetical protein cofit 26 85
  Paraburkholderia graminis OAS925 ABIE53_006501 TRAP-type C4-dicarboxylate transport system permease small subunit insig. 30 55
o Burkholderia phytofirmans PsJN BPHYT_RS24180 C4-dicarboxylate ABC transporter substrate-binding protein no data 29 84
  Pseudomonas segetis P6 MPMX49_02443 hypothetical protein insig. 29 87
  Desulfovibrio vulgaris Hildenborough JW710 DVU0010 TRAP transporter, DctQ family (TIGR) insig. 28 71
  Bosea sp. OAE506 ABIE41_RS06670 TRAP transporter small permease insig. 26 78
o Ralstonia sp. UNC404CL21Col ABZR87_RS21095 TRAP transporter small permease insig. 24 86
  Sinorhizobium meliloti 1021 SM_b21437 C4-dicarboxylate transport system, permease small protein transmembrane insig. 29 84
o Dinoroseobacter shibae DFL-12 Dshi_0957 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 26 80
  Variovorax sp. SCN45 GFF6469 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter insig. 25 73
  Klebsiella michiganensis M5al BWI76_RS24130 small integral C4-dicarboxylate membrane transporter insig. 26 74
  Alteromonas macleodii MIT1002 MIT1002_02427 Neu5Ac permease insig. 22 78
  Sinorhizobium meliloti 1021 SM_b20980 small C4-dicarboxylate uptake permease insig. 24 78
  Azospirillum sp. SherDot2 MPMX19_06068 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM insig. 27 58
  Vibrio cholerae E7946 ATCC 55056 CSW01_08920 C4-dicarboxylate ABC transporter permease insig. 28 80
  Variovorax sp. OAS795 ABID97_RS19630 TRAP transporter small permease insig. 25 78
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF796 TRAP-type C4-dicarboxylate transport system, small permease component insig. 26 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03358 TRAP transporter, DctM subunit insig. 29 48
  Variovorax sp. OAS795 ABID97_RS10335 TRAP transporter small permease sig. 28 73
  Escherichia coli ECOR38 HEPCGN_09410 C4-dicarboxylate ABC transporter permease insig. 28 46
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF703 TRAP-type C4-dicarboxylate transport system, small permease component insig. 26 67
  Dinoroseobacter shibae DFL-12 Dshi_1833 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 24 69
  Cellulophaga baltica 18 M666_RS19725 TRAP transporter small permease insig. 26 76
  Escherichia coli ECOR27 NOLOHH_11095 dctM C4-dicarboxylate ABC transporter permease insig. 27 74
  Pseudomonas aeruginosa PA14 IKLFDK_19465 TRAP transporter permease DctQ insig. 36 34
  Escherichia coli ECOR38 HEPCGN_18530 dctM C4-dicarboxylate ABC transporter permease insig. 27 74
  Bosea sp. OAE506 ABIE41_RS16400 TRAP transporter small permease insig. 27 86
  Pseudomonas stutzeri RCH2 Psest_2123 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) insig. 36 47
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF173 TRAP-type C4-dicarboxylate transport system, small permease component insig. 25 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1303 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 29 47
  Shewanella oneidensis MR-1 SO3135 C4-dicarboxylate transporter, putative (NCBI ptt file) insig. 27 40
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3628 TRAP-type C4-dicarboxylate transport system, small permease component insig. 22 89
  Fusobacterium nucleatum SB010 HUW76_03970 TRAP transporter small permease strong 24 60
  Xanthobacter sp. DMC5 GFF430 hypothetical protein insig. 33 37
  Acidovorax sp. GW101-3H11 Ac3H11_3228 gluconate TRAP transporter, small permease component (from data) strong 28 78
  Shewanella amazonensis SB2B Sama_2210 alpha-ketoglutarate TRAP transporter, small permease component (from data) strong 27 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05325 TRAP-type C4-dicarboxylate transport system, small permease component no data 33 46
  Marinobacter adhaerens HP15 HP15_4075 TRAP dicarboxylate transporter, DctQ subunit insig. 26 41
  Phaeobacter inhibens DSM 17395 PGA1_c07770 TRAP transporter, subunit DctQ insig. 24 70
  Pseudomonas segetis P6 MPMX49_02370 hypothetical protein cofit 36 37
  Shewanella sp. ANA-3 Shewana3_1415 tripartite ATP-independent periplasmic transporter DctQ (RefSeq) strong 28 39
  Castellaniella sp019104865 MT123 ABCV34_RS15065 TRAP transporter small permease insig. 27 66
  Burkholderia phytofirmans PsJN BPHYT_RS30450 ABC transporter permease insig. 26 76
  Acidovorax sp. GW101-3H11 Ac3H11_1951 TRAP-type C4-dicarboxylate transport system, small permease component insig. 22 66
  Pseudomonas segetis P6 MPMX49_01531 hypothetical protein insig. 25 67
  Castellaniella sp019104865 MT123 ABCV34_RS12255 TRAP transporter small permease insig. 27 64
  Azospirillum sp. SherDot2 MPMX19_02971 Sialic acid TRAP transporter permease protein SiaT insig. 31 51