| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF2735 | | Transcriptional regulator, LysR family | insig. | 100 | 100 |
| o | Azospirillum sp. SherDot2 | MPMX19_06917 | | HTH-type transcriptional regulator PgrR | cofit | 69 | 99 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS26575 | | LysR family transcriptional regulator | insig. | 71 | 99 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS21020 | | LysR family transcriptional regulator | no data | 69 | 99 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS03305 | | LysR family transcriptional regulator | insig. | 68 | 99 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS17975 | | LysR family transcriptional regulator | insig. | 68 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS59215 | | LysR family transcriptional regulator | insig. | 68 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_11360 | | LysR family transcriptional regulator | no data | 68 | 99 |
| o | Rahnella sp. WP5 | EX31_RS20705 | | LysR family transcriptional regulator | insig. | 63 | 99 |
| o | Pseudomonas sp. BP01 | JOY50_RS10620 | | LysR family transcriptional regulator | insig. | 63 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS07860 | | LysR family transcriptional regulator | insig. | 63 | 99 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_26885 | | LysR family transcriptional regulator | insig. | 61 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1182 | | Transcriptional regulator, LysR family | sig. | 60 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4897 | | Transcriptional regulator, LysR family | insig. | 58 | 99 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS14400 | | LysR family transcriptional regulator | insig. | 62 | 99 |
| o | Serratia liquefaciens MT49 | IAI46_12105 | | LysR family transcriptional regulator | insig. | 57 | 99 |
| o | Pseudomonas simiae WCS417 | PS417_17205 | | LysR family transcriptional regulator | insig. | 57 | 99 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS19135 | | LysR family transcriptional regulator | insig. | 55 | 99 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS19135 | | LysR family transcriptional regulator | insig. | 55 | 99 |
| o | Pseudomonas sp. RS175 | PFR28_02009 | | HTH-type transcriptional regulator PgrR | insig. | 59 | 99 |
| o | Pseudomonas orientalis W4I3 | QF045_RS15625 | | LysR family transcriptional regulator | insig. | 57 | 99 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3062 | | transcriptional regulator, LysR family | insig. | 52 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3062 | | transcriptional regulator, LysR family | insig. | 52 | 100 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10400 | | LysR family transcriptional regulator | insig. | 54 | 99 |
| | Variovorax sp. SCN45 | GFF5667 | | Transcriptional regulator, LysR family | insig. | 54 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS13435 | | LysR family transcriptional regulator | insig. | 51 | 99 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02295 | | HTH-type transcriptional regulator PgrR | cofit | 56 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS20380 | | LysR family transcriptional regulator | strong | 50 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_001468 | | DNA-binding transcriptional LysR family regulator | insig. | 50 | 99 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23640 | | LysR family transcriptional regulator | insig. | 52 | 98 |
| o | Agrobacterium fabrum C58 | Atu4271 | | LysR family transcriptional regulator | insig. | 51 | 99 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS13685 | | LysR family transcriptional regulator | insig. | 52 | 98 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0141 | | transcriptional regulator, LysR family | insig. | 53 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS04915 | | LysR family transcriptional regulator | insig. | 52 | 99 |
| | Rahnella sp. WP5 | EX31_RS03095 | | LysR family transcriptional regulator | insig. | 46 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_004366 | | DNA-binding transcriptional LysR family regulator | sig. | 46 | 99 |
| | Rahnella sp. WP5 | EX31_RS10405 | | LysR family transcriptional regulator | insig. | 41 | 99 |
| | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 42 | 98 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 38 | 99 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 40 | 100 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 40 | 100 |
| | Azospirillum sp. SherDot2 | MPMX19_04565 | | HTH-type transcriptional regulator PgrR | insig. | 40 | 100 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18390 | | LysR family transcriptional regulator | strong | 38 | 98 |
| | Ralstonia solanacearum UW163 | UW163_RS20740 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0884 | | Transcriptional regulator | insig. | 42 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33825 | | LysR family transcriptional regulator | insig. | 41 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 99 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19415 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 40 | 98 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 37 | 100 |
| | Sphingobium sp. HT1-2 | GFF1839 | | Transcriptional regulator, LysR family | cofit | 41 | 100 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05160 | | LysR family transcriptional regulator | cofit | 38 | 98 |
| | Shewanella loihica PV-4 | Shew_1539 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 98 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 41 | 99 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS21335 | | LysR family transcriptional regulator | insig. | 40 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01123 | | transcriptional regulator, LysR family | insig. | 38 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS03475 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| | Pseudomonas sp. SVBP6 | COO64_RS26735 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| | Methylophilus sp. DMC18 | GFF2116 | | HTH-type transcriptional regulator PgrR | insig. | 37 | 100 |
| | Pantoea sp. MT58 | IAI47_21090 | | LysR family transcriptional regulator | insig. | 38 | 100 |
| | Dechlorosoma suillum PS | Dsui_1892 | | transcriptional regulator | insig. | 38 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02887 | | transcriptional regulator, LysR family | no data | 42 | 95 |
| | Enterobacter sp. TBS_079 | MPMX20_02159 | | HTH-type transcriptional regulator PgrR | insig. | 38 | 98 |
| | Ralstonia solanacearum GMI1000 | RS_RS22475 | | LysR family transcriptional regulator | strong | 37 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF461 | | Transcriptional regulator, LysR family | insig. | 41 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS14505 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1041 | | transcriptional regulator, LysR family | insig. | 40 | 98 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 99 |
| | Pseudomonas orientalis W4I3 | QF045_RS20290 | | LysR family transcriptional regulator | cofit | 38 | 98 |
| | Shewanella sp. ANA-3 | Shewana3_1836 | | LysR family transcriptional regulator (RefSeq) | insig. | 34 | 99 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10935 | | LysR family transcriptional regulator | insig. | 37 | 98 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03714 | | transcriptional regulator, LysR family | insig. | 36 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_02783 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 99 |
| | Klebsiella michiganensis M5al | BWI76_RS21745 | | LysR family transcriptional regulator | insig. | 39 | 98 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| | Rhodospirillum rubrum S1H | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | strong | 37 | 100 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14825 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 37 | 100 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42300 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 37 | 100 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c29160 | | HTH-type transcriptional regulator, LysR family | insig. | 37 | 98 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03453 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 96 |
| | Escherichia coli ECOR27 | NOLOHH_02345 | yafC | DNA-binding transcriptional regulator YafC | insig. | 37 | 96 |
| | Paraburkholderia graminis OAS925 | ABIE53_005907 | | DNA-binding transcriptional LysR family regulator | insig. | 41 | 95 |
| | Rahnella sp. WP5 | EX31_RS12035 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_02510 | | LysR family transcriptional regulator | insig. | 40 | 98 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS19260 | | LysR family transcriptional regulator | insig. | 40 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_000975 | | LysR family transcriptional activator of dmlA | insig. | 38 | 100 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30015 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 38 | 100 |
| | Escherichia coli BL21 | ECD_00201 | | LysR family putative transcriptional regulator | insig. | 37 | 95 |
| | Escherichia coli ECRC100 | OKFHMN_10000 | yafC | DNA-binding transcriptional regulator YafC | cofit | 37 | 95 |
| | Escherichia coli ECRC101 | MCAODC_00515 | yafC | DNA-binding transcriptional regulator YafC | insig. | 37 | 95 |
| | Escherichia coli ECRC102 | NIAGMN_07850 | yafC | DNA-binding transcriptional regulator YafC | insig. | 37 | 95 |
| | Escherichia coli ECRC98 | JDDGAC_13595 | yafC | DNA-binding transcriptional regulator YafC | insig. | 37 | 95 |
| | Escherichia coli ECRC99 | KEDOAH_18155 | yafC | DNA-binding transcriptional regulator YafC | no data | 37 | 95 |
| | Escherichia coli ECRC62 | BNILDI_09325 | yafC | DNA-binding transcriptional regulator YafC | insig. | 37 | 95 |
| | Escherichia coli BW25113 | b0208 | yafC | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 37 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_006367 | | DNA-binding transcriptional LysR family regulator | insig. | 39 | 97 |
| | Dickeya dadantii 3937 | DDA3937_RS03655 | | LysR family transcriptional regulator | insig. | 38 | 97 |
| | Shewanella oneidensis MR-1 | SOA0165 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 32 | 98 |
| | Pseudomonas orientalis W4I3 | QF045_RS13895 | | LysR family transcriptional regulator | insig. | 39 | 99 |