Homologs of GFF2714 from Sphingobium sp. HT1-2

FIG006045: Sigma factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF2714 FIG006045: Sigma factor, ECF subfamily insig. 100 100
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 47 79
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 47 79
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 40 79
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 33 89
  Variovorax sp. SCN45 GFF784 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 40 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02400 RNA polymerase sigma factor cofit 36 87
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 34 89
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor sig. 35 89
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 35 89
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 35 89
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 37 87
o Pseudomonas orientalis W4I3 QF045_RS19140 sigma-70 family RNA polymerase sigma factor insig. 36 89
  Pseudomonas sp. BP01 JOY50_RS12755 sigma-70 family RNA polymerase sigma factor insig. 35 85
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 34 89
o Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 32 95
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 36 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 36 87
  Rhodospirillum rubrum S1H Rru_A2372 Sigma-24 (FecI) (NCBI) insig. 35 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 36 87
  Pseudomonas simiae WCS417 PS417_11245 RNA polymerase subunit sigma-24 insig. 36 79
o Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 35 89
o Agrobacterium fabrum C58 Atu3692 sigma factor sig. 33 96
  Pseudomonas fluorescens SBW25 PFLU_RS11840 RNA polymerase sigma factor insig. 36 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11840 RNA polymerase sigma factor sig. 36 79
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 34 92
  Azospirillum brasilense Sp245 AZOBR_RS30810 RNA polymerase sigma70 insig. 34 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2727 FIG006045: Sigma factor, ECF subfamily insig. 32 81
  Pseudomonas sp. BP01 JOY50_RS02475 sigma-70 family RNA polymerase sigma factor no data 37 81
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 36 87
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 35 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 35 89
  Sphingobium sp. HT1-2 GFF4091 hypothetical protein insig. 35 78
  Pseudomonas sp. BP01 JOY50_RS18970 sigma-70 family RNA polymerase sigma factor insig. 33 93
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS05075 RNA polymerase sigma factor insig. 39 78
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09540 sigma-70 family RNA polymerase sigma factor no data 31 95
  Pseudomonas sp. SVBP6 COO64_RS18805 sigma-70 family RNA polymerase sigma factor insig. 38 85
  Rhodopseudomonas palustris CGA009 TX73_006850 RNA polymerase sigma factor insig. 37 79
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 34 88
  Ralstonia solanacearum GMI1000 RS_RS19160 RNA polymerase sigma factor sig. 32 92
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 31 88
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 32 90
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 31 88
  Ralstonia solanacearum PSI07 RPSI07_RS01670 RNA polymerase sigma factor insig. 36 77
  Variovorax sp. SCN45 GFF1723 Extracytoplasmic function (ECF) sigma factor VreI no data 34 79
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 33 85
  Pseudomonas fluorescens SBW25 PFLU_RS28550 RNA polymerase sigma factor insig. 33 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28550 RNA polymerase sigma factor insig. 33 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04645 sigma-70 family RNA polymerase sigma factor cofit 31 99
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 34 84
  Pseudomonas sp. SVBP6 COO64_RS12800 RNA polymerase sigma factor insig. 33 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 32 79
  Variovorax sp. SCN45 GFF791 RNA polymerase sigma factor RpoE insig. 31 79
  Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 32 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 32 96
  Pseudomonas sp. RS175 PFR28_01609 hypothetical protein sig. 38 79
  Pseudomonas aeruginosa MRSN321 DY961_RS09155 vreI;inference=COORDINATES RNA polymerase sigma factor VreI sig. 36 79
  Pseudomonas aeruginosa PA14 IKLFDK_02765 RNA polymerase sigma factor VreI insig. 36 79
  Pseudomonas aeruginosa PUPa3 DQ20_RS58865 vreI;inference=COORDINATES RNA polymerase sigma factor VreI sig. 36 79
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09435 RNA polymerase sigma factor insig. 33 81
  Ralstonia solanacearum GMI1000 RS_RS14615 RNA polymerase sigma factor insig. 33 84
  Pseudomonas aeruginosa MRSN321 DY961_RS27025 RNA polymerase sigma factor insig. 32 95
  Pseudomonas aeruginosa PUPa3 DQ20_RS31565 RNA polymerase sigma factor sig. 32 95
  Pseudomonas aeruginosa MRSN321 DY961_RS18335 fpvI;inference=COORDINATES pyoverdine signaling pathway sigma factor FpvI insig. 36 89
  Pseudomonas aeruginosa PA14 IKLFDK_11700 pyoverdine signaling pathway sigma factor FpvI sig. 36 89
  Pseudomonas aeruginosa PUPa3 DQ20_RS59570 fpvI;inference=COORDINATES pyoverdine signaling pathway sigma factor FpvI insig. 36 89
  Pseudomonas sp. DMC3 GFF3003 hypothetical protein insig. 37 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21465 RNA polymerase sigma factor insig. 31 91
  Ralstonia solanacearum UW163 UW163_RS17725 RNA polymerase sigma factor insig. 31 91
  Pseudomonas aeruginosa PA14 IKLFDK_24795 RNA polymerase sigma factor insig. 32 95
  Pseudomonas sp. SVBP6 COO64_RS03795 RNA polymerase sigma factor insig. 29 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS41200 RNA polymerase sigma factor insig. 37 84
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 34 76
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07135 RNA polymerase sigma factor insig. 28 92
  Pseudomonas fluorescens FW300-N2C3 AO356_24740 RNA polymerase subunit sigma-24 insig. 38 79
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 34 82
  Variovorax sp. SCN45 GFF6854 RNA polymerase ECF-type sigma factor insig. 32 95
  Ralstonia solanacearum PSI07 RPSI07_RS10560 RNA polymerase sigma factor insig. 34 79
  Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 31 95
  Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 29 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1886 FIG006045: Sigma factor, ECF subfamily insig. 29 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0778 RNA polymerase sigma factor, sigma-70 family insig. 30 96
  Pectobacterium carotovorum WPP14 HER17_RS14055 sigma-70 family RNA polymerase sigma factor insig. 35 86
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09455 RNA polymerase sigma factor insig. 32 89
  Xanthobacter sp. DMC5 GFF2704 putative RNA polymerase sigma factor FecI insig. 30 94
  Pseudomonas aeruginosa MRSN321 DY961_RS15880 RNA polymerase sigma factor sig. 37 84
  Pseudomonas aeruginosa PA14 IKLFDK_17505 RNA polymerase subunit sigma-70 insig. 37 84
  Xanthobacter sp. DMC5 GFF2424 putative RNA polymerase sigma factor FecI insig. 34 89
  Pseudomonas sp. SVBP6 COO64_RS11395 RNA polymerase sigma factor insig. 34 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 32 82
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 31 96
  Pseudomonas sp. SVBP6 COO64_RS16360 RNA polymerase sigma factor sig. 34 79
  Sphingobium sp. HT1-2 GFF2715 sigma factor insig. 32 95
  Variovorax sp. OAS795 ABID97_RS24815 sigma-70 family RNA polymerase sigma factor insig. 32 96
  Pseudomonas sp. S08-1 OH686_01025 hypothetical protein insig. 31 96
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 32 92
  Sphingobium sp. HT1-2 GFF5162 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 31 86
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 32 97
  Variovorax sp. SCN45 GFF4261 RNA polymerase ECF-type sigma factor insig. 34 87
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 33 79