| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas stutzeri RCH2 | Psest_0224 | | Transcriptional regulator | insig. | 100 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_14050 | | Transcriptional regulator, LysR family | insig. | 67 | 99 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01958 | | HTH-type transcriptional regulator DmlR | cofit | 55 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS11850 | | LysR family transcriptional regulator | insig. | 55 | 99 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_01510 | | transcriptional regulator | insig. | 55 | 96 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_482 | | Transcriptional regulator, LysR family | insig. | 54 | 96 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS09185 | | LysR family transcriptional regulator | insig. | 54 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS09185 | | LysR family transcriptional regulator | insig. | 54 | 100 |
| o | Pseudomonas sp. DMC3 | GFF4786 | | HTH-type transcriptional regulator DmlR | cofit | 53 | 96 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS11295 | | LysR family transcriptional regulator | insig. | 51 | 99 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS17840 | | transcriptional regulator | insig. | 56 | 98 |
| o | Pseudomonas simiae WCS417 | PS417_09175 | | transcriptional regulator | no data | 54 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5922 | | Transcriptional regulator, LysR family | insig. | 51 | 99 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_20020 | | transcriptional regulator | insig. | 51 | 100 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS07035 | | transcriptional regulator | insig. | 53 | 100 |
| o | Serratia liquefaciens MT49 | IAI46_16940 | | LysR family transcriptional regulator | insig. | 55 | 100 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_12635 | | putative HTH-type transcriptional regulator LtrA | insig. | 52 | 96 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS09525 | | transcriptional regulator | insig. | 52 | 99 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_959 | | Transcriptional regulator, LysR family | insig. | 54 | 98 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS08855 | | LysR family transcriptional regulator | insig. | 51 | 99 |
| o | Klebsiella michiganensis M5al | BWI76_RS04395 | | putative HTH-type transcriptional regulator | insig. | 50 | 97 |
| o | Variovorax sp. SCN45 | GFF5107 | | Transcriptional regulator, LysR family | insig. | 50 | 99 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_18590 | | LysR family transcriptional regulator | insig. | 40 | 97 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09305 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 40 | 95 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 40 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01170 | | LysR family transcriptional regulator | insig. | 43 | 95 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 36 | 94 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 39 | 95 |
| | Shewanella oneidensis MR-1 | SOA0165 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 37 | 94 |
| | Ralstonia solanacearum GMI1000 | RS_RS21490 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| o | Shewanella loihica PV-4 | Shew_1128 | | LysR family transcriptional regulator (RefSeq) | strong | 35 | 96 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 34 | 95 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1182 | | Transcriptional regulator, LysR family | sig. | 38 | 95 |
| o | Shewanella amazonensis SB2B | Sama_2485 | | LysR family transcriptional regulator (RefSeq) | strong | 35 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14825 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 38 | 95 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42300 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 38 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26885 | | LysR family transcriptional regulator | insig. | 37 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18535 | | glutathione-dependent formaldehyde neutralization regulator | insig. | 38 | 95 |
| | Shewanella oneidensis MR-1 | SO3363 | | transcriptional regulator, LysR family (NCBI ptt file) | strong | 34 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26575 | | LysR family transcriptional regulator | insig. | 39 | 95 |
| | Shewanella sp. ANA-3 | Shewana3_1186 | | LysR family transcriptional regulator (RefSeq) | strong | 34 | 96 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22530 | | LysR family transcriptional regulator | insig. | 39 | 95 |
| | Rhodospirillum rubrum S1H | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | strong | 37 | 96 |
| | Pseudomonas sp. S08-1 | OH686_18575 | | Transcriptional regulator, LysR family | insig. | 36 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01520 | | LysR family transcriptional regulator | insig. | 40 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19880 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 37 | 94 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 37 | 94 |
| | Rahnella sp. WP5 | EX31_RS10405 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_001468 | | DNA-binding transcriptional LysR family regulator | insig. | 37 | 96 |
| | Pseudomonas sp. SVBP6 | COO64_RS19755 | | LysR substrate-binding domain-containing protein | insig. | 37 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS08715 | | LysR family transcriptional regulator | sig. | 39 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS23715 | | LysR substrate-binding domain-containing protein | insig. | 37 | 94 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_11360 | | LysR family transcriptional regulator | no data | 38 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS10535 | | LysR family transcriptional regulator | strong | 37 | 97 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10400 | | LysR family transcriptional regulator | insig. | 37 | 95 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4646.1 | | Transcriptional regulator, LysR family | insig. | 37 | 95 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30015 | | LysR family transcriptional regulator | insig. | 37 | 95 |
| | Pseudomonas segetis P6 | ACVTMO_RS17005 | | LysR substrate-binding domain-containing protein | insig. | 35 | 95 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS17975 | | LysR family transcriptional regulator | insig. | 38 | 97 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS59215 | | LysR family transcriptional regulator | insig. | 38 | 97 |
| o | Azospirillum sp. SherDot2 | MPMX19_02783 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 95 |
| | Pseudomonas putida KT2440 | PP_1615 | | Transcriptional regulator, LysR family | strong | 37 | 94 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS15880 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS15880 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_001654 | | DNA-binding transcriptional LysR family regulator | sig. | 38 | 94 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4683 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 36 | 94 |
| | Pseudomonas sp. S08-1 | OH686_18145 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 38 | 94 |
| | Ralstonia solanacearum GMI1000 | RS_RS02710 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3107 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 37 | 94 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1437 | | transcriptional regulator, LysR family | insig. | 33 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1437 | | transcriptional regulator, LysR family | insig. | 33 | 95 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01562 | | transcriptional regulator, LysR family | insig. | 38 | 95 |
| | Shewanella oneidensis MR-1 | SO2053 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 35 | 95 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS21310 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS11255 | | LysR family transcriptional regulator | insig. | 37 | 92 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11255 | | LysR family transcriptional regulator | strong | 37 | 92 |
| | Acinetobacter baumannii LAC-4 | RR41_RS11105 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| | Pseudomonas sp. BP01 | JOY50_RS05555 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02449 | | HTH-type transcriptional regulator PgrR | strong | 39 | 92 |
| | Pectobacterium carotovorum WPP14 | HER17_RS03305 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Shewanella amazonensis SB2B | Sama_0005 | | LysR, substrate-binding (RefSeq) | insig. | 37 | 94 |
| | Pseudomonas sp. RS175 | PFR28_00419 | | HTH-type transcriptional regulator DmlR | strong | 37 | 94 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16575 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| | Alteromonas macleodii MIT1002 | MIT1002_03088 | | D-malate degradation protein R | insig. | 33 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15410 | | LysR family transcriptional regulator | cofit | 36 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 94 |
| | Pseudomonas simiae WCS417 | PS417_17205 | | LysR family transcriptional regulator | insig. | 35 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 37 | 95 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS06390 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS06390 | | LysR family transcriptional regulator | cofit | 37 | 94 |
| | Pseudomonas sp. DMC3 | GFF2076 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 94 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS11890 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| o | Ralstonia solanacearum UW163 | UW163_RS01700 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01435 | | HTH-type transcriptional regulator DmlR | cofit | 36 | 94 |
| | Shewanella sp. ANA-3 | Shewana3_1836 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 95 |