Homologs of GFF1588 from Variovorax sp. SCN45

Serine phosphatase RsbU, regulator of sigma subunit
SEED: Serine phosphatase RsbU, regulator of sigma subunit

84 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1588 Serine phosphatase RsbU, regulator of sigma subunit insig. 100 100
o Cupriavidus basilensis FW507-4G11 RR42_RS26740 protein serine/threonine phosphatase insig. 66 97
o Herbaspirillum seropedicae SmR1 HSERO_RS18680 hypothetical protein insig. 56 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS38730 SpoIIE family protein phosphatase insig. 59 90
o Pectobacterium carotovorum WPP14 HER17_RS16155 SpoIIE family protein phosphatase insig. 48 97
o Dickeya dianthicola 67-19 HGI48_RS05410 SpoIIE family protein phosphatase insig. 48 96
o Dickeya dianthicola ME23 DZA65_RS05710 SpoIIE family protein phosphatase insig. 48 96
o Dickeya dadantii 3937 DDA3937_RS05325 SpoIIE family protein phosphatase insig. 47 96
  Azospirillum brasilense Sp245 AZOBR_RS09205 hypothetical protein insig. 40 63
  Pseudomonas aeruginosa MRSN321 DY961_RS27145 siaA;inference=COORDINATES biofilm regulation protein phosphatase SiaA strong 37 63
  Pseudomonas aeruginosa PA14 IKLFDK_24685 biofilm regulation protein phosphatase SiaA insig. 37 63
  Pseudomonas aeruginosa PUPa3 DQ20_RS31675 siaA;inference=COORDINATES biofilm regulation protein phosphatase SiaA strong 37 63
  Magnetospirillum magneticum AMB-1 AMB_RS00950 Serine phosphatase RsbU insig. 39 63
  Azospirillum sp. SherDot2 MPMX19_04872 hypothetical protein insig. 37 63
  Azospirillum sp. SherDot2 MPMX19_00964 hypothetical protein insig. 39 63
  Pseudomonas segetis P6 ACVTMO_RS02575 siaA biofilm regulation protein phosphatase SiaA strong 35 64
  Pseudomonas stutzeri RCH2 Psest_3434 Serine phosphatase RsbU, regulator of sigma subunit sig. 34 63
  Dechlorosoma suillum PS Dsui_1364 serine phosphatase RsbU, regulator of sigma subunit insig. 35 63
  Magnetospirillum magneticum AMB-1 AMB_RS17470 HAMP domain-containing protein insig. 32 68
  Rhodanobacter sp. FW510-T8 OKGIIK_13885 eAL phosphodiesterase insig. 38 34
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS13860 phosphodiesterase insig. 39 32
  Rhodanobacter denitrificans MT42 LRK55_RS13575 GGDEF domain-containing protein insig. 39 32
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08180 EAL domain-containing protein insig. 37 34
  Dechlorosoma suillum PS Dsui_2890 diguanylate cyclase (GGDEF) domain-containing protein cofit 39 34
  Paraburkholderia sabiae LMG 24235 QEN71_RS35195 phosphodiesterase insig. 33 33
  Paraburkholderia sabiae LMG 24235 QEN71_RS00990 phosphodiesterase insig. 32 33
  Burkholderia phytofirmans PsJN BPHYT_RS02060 diguanylate cyclase insig. 31 37
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02115 diguanylate cyclase/phosphodiesterase insig. 31 37
  Paraburkholderia graminis OAS925 ABIE53_000557 EAL domain-containing protein (putative c-di-GMP-specific phosphodiesterase class I) insig. 31 32
  Ralstonia sp. UNC404CL21Col ABZR87_RS22805 phosphodiesterase insig. 31 34
  Acidovorax sp. GW101-3H11 Ac3H11_1101 diguanylate cyclase/phosphodiesterase insig. 33 32
  Ralstonia solanacearum PSI07 RPSI07_RS01135 phosphodiesterase insig. 31 34
  Castellaniella sp019104865 MT123 ABCV34_RS03850 GGDEF domain-containing protein insig. 36 33
  Cupriavidus basilensis FW507-4G11 RR42_RS35575 diguanylate cyclase insig. 31 34
  Herbaspirillum seropedicae SmR1 HSERO_RS09540 diguanylate cyclase insig. 36 32
  Castellaniella sp019104865 MT123 ABCV34_RS04665 GGDEF domain-containing protein insig. 37 33
  Fusobacterium nucleatum SB010 HUW76_06690 PP2C family protein-serine/threonine phosphatase strong 21 63
  Variovorax sp. SCN45 GFF6204 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) insig. 28 32
  Methylophilus sp. DMC18 GFF1663 hypothetical protein insig. 32 34
  Pseudomonas segetis P6 ACVTMO_RS08655 bifunctional diguanylate cyclase/phosphodiesterase insig. 30 34
  Pseudomonas fluorescens SBW25 PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 28 32
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 28 32
  Pseudomonas fluorescens FW300-N2C3 AO356_19330 diguanylate phosphodiesterase insig. 30 32
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 32
  Pseudomonas sp. DMC3 GFF2583 hypothetical protein cofit 29 32
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3740 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 28 32
  Pseudomonas orientalis W4I3 QF045_RS11965 bifunctional diguanylate cyclase/phosphodiesterase cofit 27 32
  Synechocystis sp000284455 PCC 6803 SGL_RS15800 PP2C family protein-serine/threonine phosphatase insig. 24 66
  Pseudomonas sp. SVBP6 COO64_RS06985 bifunctional diguanylate cyclase/phosphodiesterase insig. 28 32
  Pseudomonas simiae WCS417 PS417_09320 diguanylate phosphodiesterase insig. 27 32
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02030 hypothetical protein cofit 27 32
  Pseudomonas aeruginosa MRSN321 DY961_RS00625 bifunctional diguanylate cyclase/phosphodiesterase insig. 24 65
  Pseudomonas aeruginosa PUPa3 DQ20_RS40410 bifunctional diguanylate cyclase/phosphodiesterase insig. 24 65
  Pseudomonas sp. RS175 PFR28_03170 hypothetical protein insig. 28 32
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5779 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 28 32
  Synechocystis sp000284455 PCC 6803 SGL_RS17190 PP2C family protein-serine/threonine phosphatase cofit 24 66
  Pseudomonas sp. S08-1 OH686_19705 hypothetical protein insig. 27 32
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08705 response regulator cofit 31 29
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 34 24
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 34 24
  Pseudomonas aeruginosa PA14 IKLFDK_16660 diguanylate phosphodiesterase insig. 26 32
  Pseudomonas syringae pv. syringae B728a Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 26 33
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 26 33
  Pseudomonas fluorescens FW300-N2E3 AO353_02445 diguanylate phosphodiesterase insig. 27 32
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11100 response regulator insig. 33 29
  Rhodospirillum rubrum S1H Rru_A0099 Serine phosphatase (NCBI) insig. 28 66
  Desulfovibrio vulgaris Hildenborough JW710 DVUA0099 HAMP domain protein (TIGR) insig. 28 56
  Magnetospirillum magneticum AMB-1 AMB_RS05675 Serine phosphatase RsbU regulator sigma subunit insig. 27 77
  Sinorhizobium meliloti 1021 SM_b20450 regulatory protein sig. 24 54
  Desulfovibrio vulgaris Miyazaki F DvMF_0617 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 26 36
  Shewanella oneidensis MR-1 SO0555 conserved hypothetical protein (NCBI ptt file) insig. 23 36
  Azospirillum sp. SherDot2 MPMX19_00248 Sensor histidine kinase RcsC insig. 27 38
  Shewanella sp. ANA-3 Shewana3_0554 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 23 36
  Pseudomonas segetis P6 ACVTMO_RS10695 ATP-binding protein insig. 24 35
  Desulfovibrio vulgaris Hildenborough JW710 DVU1959 EAL domain/GGDEF domain protein (TIGR) insig. 25 36
  Pseudomonas aeruginosa PUPa3 DQ20_RS33015 ATP-binding protein sig. 22 46
  Pseudomonas aeruginosa MRSN321 DY961_RS02580 ATP-binding protein strong 22 46
  Pseudomonas aeruginosa PA14 IKLFDK_14645 ATPase no data 22 46
  Xanthobacter sp. DMC5 GFF1909 hypothetical protein insig. 25 62
  Rhodospirillum rubrum S1H Rru_A3230 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 28 34
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4462 Serine phosphatase RsbU, regulator of sigma subunit insig. 29 53
  Shewanella amazonensis SB2B Sama_3153 putative diguanylate phosphodiesterase (RefSeq) insig. 22 33
  Synechococcus elongatus PCC 7942 Synpcc7942_2473 serine phosphatase no data 23 70
  Azospirillum brasilense Sp245 AZOBR_RS00995 histidine kinase sig. 28 24