Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_08420 | | AraC family transcriptional regulator | insig. | 100 | 100 |
o | Bacteroides ovatus ATCC 8483 | BACOVA_01477 | | transcriptional regulator, AraC family | insig. | 27 | 96 |
o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3671 | | AraC-type DNA-binding domain-containing proteins | insig. | 24 | 92 |
o | Shewanella amazonensis SB2B | Sama_2715 | | putative regulatory protein (RefSeq) | insig. | 27 | 92 |
o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS09025 | | helix-turn-helix domain-containing protein | insig. | 27 | 92 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1906 | | transcriptional regulator (NCBI ptt file) | insig. | 29 | 67 |
o | Variovorax sp. SCN45 | GFF7055 | | hypothetical protein | no data | 25 | 94 |
o | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS08650 | | helix-turn-helix domain-containing protein | insig. | 23 | 92 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_28420 | | hypothetical protein | insig. | 30 | 66 |
o | Pseudomonas stutzeri RCH2 | Psest_0755 | | Bacterial regulatory helix-turn-helix proteins, AraC family. | insig. | 26 | 92 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS07400 | | helix-turn-helix domain-containing protein | insig. | 30 | 46 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2338 | | putative transcriptional regulator (NCBI ptt file) | insig. | 38 | 34 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00854 | | transcriptional regulator, AraC family | insig. | 25 | 90 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_15450 | | hypothetical protein | insig. | 24 | 95 |
| Caulobacter crescentus NA1000 | CCNA_02656 | | AraC-family transcriptional regulator | sig. | 29 | 67 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02656 | | AraC-family transcriptional regulator | cofit | 29 | 67 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2356 | | transcriptional regulator, AraC family (NCBI ptt file) | insig. | 24 | 65 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10620 | | hypothetical protein | insig. | 21 | 93 |
| Variovorax sp. SCN45 | GFF925 | | hypothetical protein | insig. | 36 | 32 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS14575 | | helix-turn-helix domain-containing protein | insig. | 29 | 77 |
| Pseudomonas fluorescens SBW25 | PFLU_RS14990 | | helix-turn-helix transcriptional regulator | insig. | 24 | 85 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS14990 | | helix-turn-helix transcriptional regulator | sig. | 24 | 85 |
| Rhodanobacter denitrificans MT42 | LRK55_RS01185 | | helix-turn-helix domain-containing protein | insig. | 26 | 68 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS01420 | | helix-turn-helix domain-containing protein | insig. | 26 | 68 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4292 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 36 | 32 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1430 | | transcriptional regulator (NCBI ptt file) | sig. | 23 | 92 |
| Variovorax sp. SCN45 | GFF1009 | | Transcriptional regulator, AraC family | insig. | 24 | 93 |
| Sinorhizobium meliloti 1021 | SMa1823 | | Transcriptional regulator | insig. | 34 | 35 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_1469 | | transcriptional regulator, AraC family | insig. | 27 | 68 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1235 | | Transcriptional regulator, AraC family | insig. | 26 | 94 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_0974 | | AraC-type DNA-binding domain-containing proteins | insig. | 24 | 92 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS07300 | | hypothetical protein | insig. | 23 | 90 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2886 | | transcriptional regulator, AraC family (TIGR) | insig. | 35 | 31 |
| Caulobacter crescentus NA1000 | CCNA_03621 | | AraC-family transcriptional regulator | insig. | 24 | 70 |
| Caulobacter crescentus NA1000 Δfur | CCNA_03621 | | AraC-family transcriptional regulator | insig. | 24 | 70 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10670 | | transcriptional regulator | insig. | 24 | 92 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2399.1 | | FIG024214: Transcriptional regulator, AraC family | insig. | 38 | 28 |
| Rhizobium sp. OAE497 | ABIE40_RS20540 | | AraC family transcriptional regulator | sig. | 29 | 50 |
| Azospirillum sp. SherDot2 | MPMX19_04709 | | HTH-type transcriptional regulator CdhR | insig. | 31 | 31 |
| Variovorax sp. SCN45 | GFF5573 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 34 | 30 |
| Rhodanobacter denitrificans MT42 | LRK55_RS15300 | | helix-turn-helix transcriptional regulator | insig. | 21 | 96 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS04420 | | AraC family transcriptional regulator | insig. | 31 | 50 |
| Dickeya dadantii 3937 | DDA3937_RS03630 | | helix-turn-helix transcriptional regulator | insig. | 25 | 88 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS00355 | | AraC family transcriptional regulator | insig. | 23 | 91 |
| Dinoroseobacter shibae DFL-12 | Dshi_4172 | | transcriptional regulator, AraC family (RefSeq) | no data | 34 | 28 |
| Klebsiella michiganensis M5al | BWI76_RS03785 | | AraC family transcriptional regulator | insig. | 32 | 50 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS14630 | | AraC family transcriptional regulator | sig. | 32 | 32 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_6006 | | L-rhamnose operon transcriptional activator RhaR | insig. | 29 | 47 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4154 | | Transcriptional regulator, AraC family | insig. | 31 | 48 |
| Azospirillum brasilense Sp245 | AZOBR_RS04935 | | hypothetical protein | insig. | 26 | 69 |
| Agrobacterium fabrum C58 | Atu1081 | | transcriptional regulator, AraC family | insig. | 33 | 30 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3887.1 | | hypothetical protein | insig. | 31 | 31 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS15580 | | helix-turn-helix domain-containing protein | sig. | 20 | 96 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS31930 | | AraC family transcriptional regulator | insig. | 36 | 30 |
| Serratia liquefaciens MT49 | IAI46_05420 | | helix-turn-helix transcriptional regulator | insig. | 37 | 28 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13400 | | AraC family transcriptional regulator | insig. | 36 | 30 |
| Sinorhizobium meliloti 1021 | SMc01610 | | transcriptional regulator | insig. | 34 | 36 |
| Agrobacterium fabrum C58 | Atu0410 | | transcriptional regulator, AraC family | insig. | 30 | 49 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS33620 | | GlxA family transcriptional regulator | insig. | 35 | 30 |
| Rhizobium sp. OAE497 | ABIE40_RS13855 | | AraC family transcriptional regulator | insig. | 32 | 30 |
| Sinorhizobium meliloti 1021 | SMc00558 | | transcriptional regulator | insig. | 30 | 30 |
| Azospirillum brasilense Sp245 | AZOBR_RS26865 | | AraC family transcriptional regulator | insig. | 30 | 38 |
| Rhodopseudomonas palustris CGA009 | TX73_010875 | | AraC family transcriptional regulator | insig. | 28 | 61 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4047 | | transcriptional regulator, AraC family | insig. | 23 | 93 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2342 | | transcription regulator (NCBI ptt file) | insig. | 35 | 28 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS17910 | | AraC family transcriptional regulator | insig. | 33 | 31 |
| Bacteroides ovatus ATCC 8483 | BACOVA_04394 | | response regulator receiver domain protein | strong | 31 | 31 |
| Pseudomonas fluorescens SBW25 | PFLU_RS13270 | | AraC family transcriptional regulator | insig. | 35 | 42 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS13270 | | AraC family transcriptional regulator | insig. | 35 | 42 |
| Dickeya dadantii 3937 | DDA3937_RS14520 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| Enterobacter sp. TBS_079 | MPMX20_00624 | | HTH-type transcriptional activator RhaS | insig. | 31 | 44 |
| Bacteroides ovatus ATCC 8483 | BACOVA_04931 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 31 | 32 |
| Burkholderia phytofirmans PsJN | BPHYT_RS21015 | | transcriptional regulator | no data | 29 | 31 |
| Pseudomonas putida KT2440 | PP_3022 | | Transcriptional regulator, AraC family | insig. | 35 | 30 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3529 | | AraC-type DNA-binding domain-containing proteins | insig. | 31 | 38 |
| Serratia liquefaciens MT49 | IAI46_09935 | | helix-turn-helix domain-containing protein | insig. | 31 | 32 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00239 | | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein | insig. | 32 | 28 |
| Azospirillum sp. SherDot2 | MPMX19_01511 | | HTH-type transcriptional activator RhaR | insig. | 32 | 33 |
| Rhodopseudomonas palustris CGA009 | TX73_006805 | | AraC family transcriptional regulator | insig. | 30 | 30 |
| Phaeobacter inhibens DSM 17395 | PGA1_c12510 | | transcriptional regulator, AraC family | insig. | 30 | 32 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS39550 | | AraC family transcriptional regulator | insig. | 29 | 51 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2506 | | Multiple antibiotic resistance protein MarA | insig. | 31 | 34 |
| Paraburkholderia graminis OAS925 | ABIE53_005408 | | AraC-like DNA-binding protein | insig. | 27 | 45 |
| Alteromonas macleodii MIT1002 | MIT1002_02469 | | Carnitine catabolism transcriptional activator | insig. | 22 | 94 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS05430 | | hybrid sensor histidine kinase/response regulator transcription factor | insig. | 32 | 32 |
| Sinorhizobium meliloti 1021 | SMc02609 | | transcriptional regulator | insig. | 37 | 27 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS09985 | | substrate-binding domain-containing protein | cofit | 35 | 29 |
| Rahnella sp. WP5 | EX31_RS03030 | | helix-turn-helix transcriptional regulator | strong | 28 | 32 |
| Escherichia coli BL21 | ECD_01490 | | multiple antibiotic resistance transcriptional regulator | no data | 31 | 31 |
| Escherichia fergusonii Becca | EFB2_02430 | | Multiple antibiotic resistance protein MarA | insig. | 31 | 31 |
| Escherichia coli ECOR27 | NOLOHH_18720 | marA | MDR efflux pump AcrAB transcriptional activator MarA | no data | 31 | 31 |
| Escherichia coli ECOR38 | HEPCGN_26845 | marA | MDR efflux pump AcrAB transcriptional activator MarA | cofit | 31 | 31 |
| Escherichia coli ECRC101 | OKFHMN_01075 | marA | MDR efflux pump AcrAB transcriptional activator MarA | no data | 31 | 31 |
| Escherichia coli ECRC101 | MCAODC_16850 | marA | MDR efflux pump AcrAB transcriptional activator MarA | insig. | 31 | 31 |
| Escherichia coli ECRC102 | NIAGMN_25220 | marA | MDR efflux pump AcrAB transcriptional activator MarA | no data | 31 | 31 |
| Escherichia coli ECRC62 | BNILDI_17210 | marA | MDR efflux pump AcrAB transcriptional activator MarA | insig. | 31 | 31 |
| Escherichia coli ECRC98 | JDDGAC_03585 | marA | MDR efflux pump AcrAB transcriptional activator MarA | no data | 31 | 31 |
| Escherichia coli ECRC99 | KEDOAH_27355 | marA | MDR efflux pump AcrAB transcriptional activator MarA | no data | 31 | 31 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02188 | | Multiple antibiotic resistance protein MarA | insig. | 31 | 31 |
| Escherichia coli Nissle 1917 | ECOLIN_RS08735 | | MDR efflux pump AcrAB transcriptional activator MarA | insig. | 31 | 31 |