Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Klebsiella michiganensis M5al | BWI76_RS26560 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 100 | 100 |
o | Pseudomonas putida KT2440 | PP_2790 | | Sigma-54 dependent sensory box protein | strong | 32 | 95 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06211 | | transcriptional regulator, propionate catabolism operon regulatory protein | insig. | 31 | 95 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS00405 | | propionate catabolism operon regulatory protein PrpR | insig. | 32 | 90 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS22815 | | propionate catabolism operon regulatory protein PrpR | insig. | 31 | 90 |
o | Ralstonia solanacearum UW163 | UW163_RS23435 | | propionate catabolism operon regulatory protein PrpR | insig. | 31 | 90 |
o | Pseudomonas aeruginosa PA14 | IKLFDK_10840 | | propionate catabolism operon regulatory protein PrpR | sig. | 32 | 94 |
o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4560 | | Propionate catabolism operon regulatory protein PrpR | insig. | 31 | 93 |
o | Ralstonia solanacearum GMI1000 | RS_RS17745 | | propionate catabolism operon regulatory protein PrpR | sig. | 30 | 93 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02891 | | transcriptional regulator, propionate catabolism operon regulatory protein | sig. | 30 | 91 |
o | Ralstonia sp. UNC404CL21Col | ABZR87_RS16750 | | propionate catabolism operon regulatory protein PrpR | strong | 30 | 91 |
o | Paraburkholderia graminis OAS925 | ABIE53_005903 | | propionate catabolism operon transcriptional regulator | strong | 28 | 91 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS26850 | | ATPase AAA | strong | 29 | 94 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0569 | flrA | sigma-54 dependent transcriptional regulator (TIGR) | sig. | 44 | 50 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS31075 | | propionate catabolism operon regulatory protein PrpR | insig. | 29 | 92 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30155 | | Fis family transcriptional regulator | strong | 29 | 92 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06328 | | transcriptional regulator, propionate catabolism operon regulatory protein | strong | 28 | 95 |
| Paraburkholderia graminis OAS925 | ABIE53_005041 | | propionate catabolism operon transcriptional regulator | strong | 28 | 90 |
| Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | insig. | 42 | 51 |
| Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 42 | 51 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 42 | 51 |
| Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | insig. | 42 | 51 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 42 | 51 |
| Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 42 | 51 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS11255 | | Fis family transcriptional regulator | strong | 32 | 79 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2153 | | PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) | insig. | 34 | 68 |
| Klebsiella michiganensis M5al | BWI76_RS10230 | | AAA family ATPase | no data | 39 | 51 |
| Serratia liquefaciens MT49 | IAI46_12235 | | sigma 54-interacting transcriptional regulator | insig. | 32 | 69 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3220 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 43 | 50 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1933 | | PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) | insig. | 39 | 50 |
| Pseudomonas sp. RS175 | PFR28_01397 | | Anaerobic nitric oxide reductase transcription regulator NorR | sig. | 34 | 67 |
| Pseudomonas sp. BP01 | JOY50_RS25235 | prpR | propionate catabolism operon regulatory protein PrpR | insig. | 39 | 52 |
| Marinobacter adhaerens HP15 | HP15_2597 | | two component, sigma54 specific, transcriptional regulator, Fis family | cofit | 29 | 93 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2200 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 40 | 51 |
| Pseudomonas simiae WCS417 | PS417_12160 | | Fis family transcriptional regulator | insig. | 34 | 67 |
| Shewanella loihica PV-4 | Shew_1364 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 43 | 48 |
| Pseudomonas sp. SVBP6 | COO64_RS23875 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 33 | 67 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5631 | | Sigma-54 dependent transcriptional regulator | insig. | 39 | 52 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4261 | | Propionate catabolism operon regulatory protein PrpR | insig. | 40 | 51 |
| Shewanella sp. ANA-3 | Shewana3_1340 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 43 | 48 |
| Methylophilus sp. DMC18 | GFF2060 | | Acetoin catabolism regulatory protein | insig. | 35 | 67 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS14380 | | sigma-54 dependent transcriptional regulator | insig. | 40 | 52 |
| Pseudomonas fluorescens SBW25 | PFLU_RS12850 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 34 | 67 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS12850 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 34 | 67 |
| Pseudomonas sp. DMC3 | GFF3656 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 38 | 53 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_00410 | | Fis family transcriptional regulator | sig. | 32 | 67 |
| Escherichia coli ECRC100 | OKFHMN_08905 | prpR | propionate catabolism operon regulatory protein PrpR | cofit | 40 | 50 |
| Escherichia coli ECRC101 | MCAODC_28135 | prpR | propionate catabolism operon regulatory protein PrpR | insig. | 40 | 50 |
| Escherichia coli ECRC102 | NIAGMN_06960 | prpR | propionate catabolism operon regulatory protein PrpR | insig. | 40 | 50 |
| Escherichia coli ECRC98 | JDDGAC_12560 | prpR | propionate catabolism operon regulatory protein PrpR | cofit | 40 | 50 |
| Escherichia coli ECRC99 | KEDOAH_19060 | prpR | propionate catabolism operon regulatory protein PrpR | no data | 40 | 50 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03340 | | Propionate catabolism operon regulatory protein | insig. | 41 | 50 |
| Escherichia coli ECOR38 | HEPCGN_07490 | prpR | propionate catabolism operon regulatory protein PrpR | insig. | 40 | 50 |
| Variovorax sp. OAS795 | ABID97_RS17700 | | sigma 54-interacting transcriptional regulator | insig. | 38 | 53 |
| Escherichia coli BL21 | ECD_00285 | | propionate catabolism operon regulatory protein | sig. | 40 | 50 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2875 | | Sigma-54 dependent transcriptional regulator | strong | 33 | 67 |
| Escherichia coli BW25113 | b0330 | prpR | DNA-binding transcriptional activator (NCBI) | insig. | 41 | 50 |
| Escherichia fergusonii Becca | EFB2_03707 | | Propionate catabolism operon regulatory protein | insig. | 40 | 50 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5560 | | Sigma-54 dependent transcriptional regulator/sensory box protein | insig. | 35 | 67 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_18180 | | Fis family transcriptional regulator | sig. | 34 | 67 |
| Escherichia coli ECOR27 | NOLOHH_01780 | prpR | propionate catabolism operon regulatory protein PrpR | cofit | 40 | 50 |
| Escherichia coli ECRC62 | BNILDI_23195 | prpR | propionate catabolism operon regulatory protein PrpR | cofit | 40 | 50 |
| Shewanella oneidensis MR-1 | SO3230 | flrC | flagellar regulatory protein C (NCBI ptt file) | cofit | 42 | 48 |
| Dechlorosoma suillum PS | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 39 | 50 |
| Pseudomonas aeruginosa PA14 | IKLFDK_09800 | | sigma-54-dependent transcriptional regulator HbcR | insig. | 32 | 71 |
| Escherichia coli Nissle 1917 | ECOLIN_RS02145 | | propionate catabolism operon regulatory protein PrpR | insig. | 39 | 50 |
| Paraburkholderia graminis OAS925 | ABIE53_004708 | | transcriptional regulator with PAS, ATPase and Fis domain | insig. | 37 | 50 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2039 | | Sigma-54 dependent transcriptional regulator | sig. | 32 | 67 |
| Pseudomonas fluorescens SBW25 | PFLU_RS23990 | | sigma-54-dependent transcriptional regulator | insig. | 39 | 53 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS23990 | | sigma-54-dependent transcriptional regulator | sig. | 39 | 53 |
| Alteromonas macleodii MIT1002 | MIT1002_01083 | | Transcriptional regulatory protein ZraR | cofit | 39 | 49 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_619 | | Sigma-54 dependent transcriptional regulator/sensory box protein | insig. | 38 | 53 |
| Pseudomonas simiae WCS417 | PS417_22350 | | Fis family transcriptional regulator | insig. | 38 | 53 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_21780 | | Fis family transcriptional regulator | insig. | 38 | 52 |
| Pseudomonas sp. RS175 | PFR28_03381 | | Transcriptional regulatory protein TyrR | insig. | 38 | 53 |
| Variovorax sp. SCN45 | GFF518 | | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | insig. | 38 | 52 |
| Pseudomonas stutzeri RCH2 | Psest_1071 | | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | strong | 36 | 58 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_29210 | | AAA family ATPase | insig. | 38 | 51 |
o | Rhodanobacter denitrificans MT42 | LRK55_RS07095 | | sigma 54-interacting transcriptional regulator | cofit | 28 | 95 |
o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS07365 | | sigma 54-interacting transcriptional regulator | insig. | 28 | 95 |
| Azospirillum sp. SherDot2 | MPMX19_03461 | | Regulatory protein AtoC | insig. | 39 | 51 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4725 | | Formate hydrogenlyase transcriptional activator | insig. | 40 | 50 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1324 | | sigma54 specific transcriptional regulator, Fis family (RefSeq) | strong | 39 | 49 |
| Pseudomonas sp. S08-1 | OH686_00830 | | Transcriptional regulator | cofit | 32 | 72 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16225 | | Fis family transcriptional regulator | insig. | 39 | 50 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1260 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 38 | 52 |
| Shewanella amazonensis SB2B | Sama_2299 | | response regulator receiver protein (RefSeq) | sig. | 41 | 49 |
| Variovorax sp. SCN45 | GFF3669 | | Two-component system response regulator protein | no data | 39 | 50 |
| Pseudomonas sp. DMC3 | GFF5167 | | Transcriptional regulatory protein TyrR | insig. | 38 | 53 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03547 | | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains | insig. | 37 | 50 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_03490 | | Fis family transcriptional regulator | strong | 36 | 56 |
| Pseudomonas sp. BP01 | JOY50_RS19610 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 35 | 67 |
| Pantoea sp. MT58 | IAI47_19790 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 39 | 52 |
| Azospirillum sp. SherDot2 | MPMX19_06065 | | Anaerobic nitric oxide reductase transcription regulator NorR | cofit | 37 | 54 |
| Pseudomonas sp. SVBP6 | COO64_RS04460 | | sigma-54-dependent transcriptional regulator | insig. | 37 | 56 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2455 | | Putative sensory histidine kinase YfhA | strong | 39 | 51 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1870 | | Sigma-54 dependent transcriptional regulator/sensory box protein | cofit | 36 | 56 |
| Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 41 | 49 |
| Rhodopseudomonas palustris CGA009 | TX73_024055 | | nif-specific transcriptional activator NifA | strong | 38 | 50 |
| Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 41 | 49 |