| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Burkholderia phytofirmans PsJN | BPHYT_RS25885 | | type III secretion protein | insig. | 100 | 100 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00858 | | Surface presentation of antigens protein SpaR | insig. | 27 | 95 |
| o | Escherichia coli ECOR27 | NOLOHH_11680 | sctT | type III secretion system export apparatus subunit SctT | no data | 26 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13765 | | type III secretion system export apparatus subunit SctT | insig. | 29 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS38070 | | type III secretion system export apparatus subunit SctT | insig. | 31 | 73 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS19515 | | EscT/YscT/HrcT family type III secretion system export apparatus protein | insig. | 29 | 70 |
| | Ralstonia solanacearum UW163 | UW163_RS19660 | | EscT/YscT/HrcT family type III secretion system export apparatus protein | insig. | 29 | 70 |
| | Ralstonia solanacearum GMI1000 | RS_RS21305 | | EscT/YscT/HrcT family type III secretion system export apparatus protein | insig. | 28 | 70 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2413 | | type III secretion protein SpaR/YscT/HrcT (RefSeq) | insig. | 32 | 68 |
| o | Paraburkholderia graminis OAS925 | ABIE53_006049 | | type III secretion protein T | no data | 25 | 94 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03695 | | EscT/YscT/HrcT family type III secretion system export apparatus protein | insig. | 27 | 70 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3611 | | Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) | no data | 27 | 70 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19325 | | type III secretion system export apparatus subunit SctT | insig. | 28 | 72 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2363 | | Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) | insig. | 32 | 65 |
| | Pseudomonas segetis P6 | MPMX49_03132 | | Flagellar biosynthetic protein FliR | strong | 27 | 93 |
| | Erwinia amylovora T8 | OLJFJH_15000 | | type III secretion system export apparatus subunit SctT | strong | 26 | 65 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2823.1 | | Flagellar biosynthesis protein FliR | cofit | 28 | 83 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS22220 | | flagellar biosynthetic protein FliR | strong | 28 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_08155 | | SctT family type III secretion system export apparatus subunit PscT | insig. | 28 | 64 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_02695 | | type III secretion system protein SpaR | insig. | 31 | 65 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1463 | | Flagellar biosynthesis protein FliR | no data | 28 | 82 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_10365 | sctT | type III secretion system export apparatus subunit SctT | insig. | 27 | 73 |
| | Erwinia tracheiphila SCR3 | LU632_RS00500 | sctT | type III secretion system export apparatus subunit SctT | insig. | 27 | 73 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS36775 | | type III secretion system export apparatus subunit SctT | insig. | 22 | 72 |
| | Variovorax sp. SCN45 | GFF7006 | | Flagellar biosynthesis protein FliR | insig. | 31 | 67 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS01450 | | flagellar biosynthetic protein FliR | insig. | 26 | 97 |
| | Pectobacterium carotovorum WPP14 | HER17_RS08220 | | flagellar type III secretion system protein FliR | cofit | 25 | 88 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1416 | | Flagellar biosynthesis protein FliR | insig. | 30 | 72 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04998 | | type III secretion protein T | sig. | 22 | 72 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3442 | | Flagellar biosynthesis protein FliR | cofit | 30 | 61 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3442 | | Flagellar biosynthesis protein FliR | sig. | 30 | 61 |
| | Erwinia amylovora T8 | OLJFJH_09500 | | type III secretion system export apparatus subunit SctT | insig. | 24 | 72 |
| | Pseudomonas sp. RS175 | PFR28_00847 | | Flagellar biosynthetic protein FliR | strong | 29 | 61 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18075 | | type III secretion system export apparatus subunit SctT | insig. | 28 | 72 |
| | Ralstonia solanacearum GMI1000 | RS_RS18950 | | flagellar biosynthetic protein FliR | insig. | 27 | 72 |
| | Variovorax sp. SCN45 | GFF5738 | | Flagellar biosynthesis protein FliR | insig. | 26 | 86 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS21675 | | flagellar biosynthetic protein FliR | insig. | 27 | 72 |
| | Ralstonia solanacearum UW163 | UW163_RS17510 | | flagellar biosynthetic protein FliR | insig. | 27 | 72 |
| | Escherichia coli ECRC100 | OKFHMN_15300 | escT | type III secretion system LEE export apparatus protein EscT | cofit | 21 | 93 |
| | Escherichia coli ECRC101 | MCAODC_05810 | escT | type III secretion system LEE export apparatus protein EscT | insig. | 21 | 93 |
| | Escherichia coli ECRC102 | NIAGMN_13060 | escT | type III secretion system LEE export apparatus protein EscT | sig. | 21 | 93 |
| | Escherichia coli ECRC98 | JDDGAC_18925 | escT | type III secretion system LEE export apparatus protein EscT | sig. | 21 | 93 |
| | Escherichia coli ECRC99 | KEDOAH_12845 | escT | type III secretion system LEE export apparatus protein EscT | no data | 21 | 93 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0604 | | flagellar biosynthetic protein FliR | cofit | 27 | 73 |
| | Enterobacter sp. TBS_079 | MPMX20_02947 | | Flagellar biosynthetic protein FliR | strong | 25 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2578 | | Flagellar biosynthesis protein FliR | strong | 29 | 61 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3721.1 | | Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) | insig. | 24 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS16840 | | flagellar biosynthetic protein FliR | strong | 28 | 82 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_03760 | | flagellar biosynthetic protein FliR | strong | 29 | 61 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04144 | | Flagellar biosynthetic protein FliR | cofit | 30 | 61 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_18755 | | flagellar biosynthetic protein FliR | strong | 29 | 67 |
| | Marinobacter adhaerens HP15 | HP15_2310 | | flagellar biosynthesis protein FliR | strong | 25 | 84 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21700 | | flagellar type III secretion system protein FliR | strong | 30 | 61 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21700 | | flagellar type III secretion system protein FliR | strong | 30 | 61 |
| | Pseudomonas simiae WCS417 | PS417_19730 | | flagellar biosynthesis protein FliR | strong | 29 | 61 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS03185 | | flagellar type III secretion system protein FliR | insig. | 26 | 90 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVUA0102 | escT | type III secretion inner membrane protein (TIGR) | insig. | 28 | 60 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3620 | | Flagellar biosynthesis protein FliR | insig. | 29 | 68 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_06885 | | flagellar biosynthetic protein FliR | strong | 28 | 93 |
| | Pseudomonas sp. BP01 | JOY50_RS00610 | fliR | flagellar biosynthetic protein FliR | cofit | 27 | 61 |
| | Sphingobium sp. HT1-2 | GFF3740 | | Flagellar biosynthesis protein FliR | insig. | 28 | 93 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4538 | | Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) | insig. | 28 | 57 |
| | Pseudomonas sp. S08-1 | OH686_02760 | | flagellar biosynthetic protein FliR | strong | 26 | 83 |
| | Pseudomonas stutzeri RCH2 | Psest_1734 | | flagellar biosynthetic protein FliR | strong | 29 | 68 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS03560 | | EscT/YscT/HrcT family type III secretion system export apparatus protein | insig. | 26 | 56 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS03560 | | EscT/YscT/HrcT family type III secretion system export apparatus protein | insig. | 26 | 56 |
| | Pseudomonas putida KT2440 | PP_4353 | | Flagellar biosynthetic protein fliR | strong | 28 | 61 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4337 | | Flagellar biosynthesis protein FliR | insig. | 28 | 61 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1206 | | type III secretion protein HrcT | strong | 25 | 65 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1206 | | type III secretion protein HrcT | strong | 25 | 65 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_05715 | sctT | type III secretion system export apparatus subunit SctT | cofit | 28 | 70 |
| | Escherichia coli ECRC100 | OKFHMN_19795 | sctT | type III secretion system export apparatus subunit SctT | insig. | 27 | 52 |
| | Escherichia coli ECRC101 | MCAODC_10320 | sctT | type III secretion system export apparatus subunit SctT | insig. | 27 | 52 |
| | Escherichia coli ECRC102 | NIAGMN_17565 | sctT | type III secretion system export apparatus subunit SctT | no data | 27 | 52 |
| | Escherichia coli ECRC98 | JDDGAC_23440 | sctT | type III secretion system export apparatus subunit SctT | insig. | 27 | 52 |
| | Escherichia coli ECRC99 | KEDOAH_08335 | sctT | type III secretion system export apparatus subunit SctT | no data | 27 | 52 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4089 | | Flagellar biosynthesis protein FliR | insig. | 26 | 83 |
| | Erwinia tracheiphila SCR3 | LU632_RS03135 | sctT | type III secretion system export apparatus subunit SctT | sig. | 28 | 70 |
| | Pseudomonas sp. SVBP6 | COO64_RS21205 | fliR | flagellar biosynthetic protein FliR | strong | 28 | 67 |
| | Pseudomonas simiae WCS417 | PS417_03500 | | type III secretion system protein | insig. | 28 | 77 |
| | Pseudomonas sp. DMC3 | GFF2465 | | Flagellar biosynthetic protein FliR | cofit | 28 | 61 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4754 | | Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) | insig. | 26 | 68 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS20240 | | flagellar biosynthetic protein FliR | insig. | 27 | 64 |
| | Azospirillum brasilense Sp245 | AZOBR_RS11115 | | flagellar biosynthesis protein FliR | strong | 25 | 61 |
| | Erwinia amylovora T8 | OLJFJH_09980 | | flagellar biosynthetic protein FliR | insig. | 25 | 99 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF501 | | Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) | insig. | 26 | 93 |
| | Methylophilus sp. DMC18 | GFF552 | | Flagellar biosynthetic protein FliR | insig. | 20 | 71 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_10585 | | flagellar type III secretion system protein FliR | cofit | 28 | 74 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS13555 | | flagellar biosynthetic protein FliR | strong | 27 | 65 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS13295 | | flagellar biosynthetic protein FliR | cofit | 26 | 64 |
| | Pectobacterium carotovorum WPP14 | HER17_RS09970 | | type III secretion system export apparatus subunit SctT | insig. | 27 | 76 |
| | Rahnella sp. WP5 | EX31_RS09600 | | flagellar type III secretion system protein FliR | insig. | 23 | 88 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4006 | | Flagellar biosynthesis protein FliR | cofit | 27 | 70 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS01880 | | flagellar type III secretion system protein FliR | cofit | 32 | 37 |
| | Shewanella sp. ANA-3 | Shewana3_1354 | fliR | flagellar biosynthesis protein FliR (RefSeq) | strong | 28 | 61 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15020 | | flagellar biosynthetic protein FliR | insig. | 25 | 65 |